| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,551,119 | A→C | 15.7% | T80P (ACC→CCC) | osmC → | lipoyl‑dependent Cys‑based peroxidase, hydroperoxide resistance; salt‑shock inducible membrane protein; peroxiredoxin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,551,119 | 0 | A | C | 15.7% | 2526.0 / 68.8 | 913 | T80P (ACC→CCC) | osmC | lipoyl‑dependent Cys‑based peroxidase, hydroperoxide resistance; salt‑shock inducible membrane protein; peroxiredoxin |
| Reads supporting (aligned to +/- strand): ref base A (444/275); new base C (11/174); total (455/458) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 0.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 952 total aligned reads displayed.
ACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAG > CP009273/1550970‑1551268 | ccagcgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATa < 1:39017‑M1/119‑1 (MQ=255) cgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATaccac > 1:928630‑M1/28‑150 (MQ=255) cgcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATaccac > 1:593830‑M1/28‑150 (MQ=255) gcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATaccacc < 2:80554‑M1/124‑1 (MQ=255) gcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATaccacc < 2:738829‑M1/124‑1 (MQ=255) gcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATaccacc < 2:697729‑M1/124‑1 (MQ=255) gcccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATaccacc > 1:245061‑M1/27‑150 (MQ=255) cccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTAGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCAccg < 2:581283‑M1/125‑1 (MQ=255) ccaatattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCAccgc < 1:268030‑M1/126‑1 (MQ=255) atattttcgatttcaccaatcTGAAGGCGAAAAAGGAATCAACCCTGTAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATTGATTGATACCACCGCCGa < 2:147945‑M1/129‑1 (MQ=255) atattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGa < 1:715874‑M1/129‑1 (MQ=255) tattttcgatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGAt < 2:545793‑M1/130‑1 (MQ=255) gatttcaccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGc < 2:853364‑M1/137‑1 (MQ=255) tttccccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTg > 1:869452‑M1/12‑150 (MQ=255) caccaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATACCGCATGTTTCTCAAGGGCGCTTTCATTAATGCGGGGGGAAGCGGGATTCACCCCA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGAt > 1:895406‑M1/9‑150 (MQ=255) accaatcTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGAt < 2:399517‑M1/142‑1 (MQ=255) accaatcTGAAGGAAAAAAAGGAACCACCCCTGAAGACTTGATGGGCGCGGCGAATGCCGCATTTTTCTCAATGGCGTTTTCATAAATGCGGGGGGAGGGGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGAt > 2:279177‑M1/8‑149 (MQ=255) gTTTTGAAGGCAAAAAAGGAACCACCCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCAA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAg < 1:700667/150‑1 (MQ=255) ttttGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGt > 2:512915/1‑150 (MQ=255) cTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTg < 1:907566‑M1/148‑1 (MQ=255) gAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAGGCGGGATTCACGCAA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGAt < 1:574502/150‑1 (MQ=255) aaGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATTTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGCGGGATTCCCGCCA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTgg < 1:286915/147‑1 (MQ=255) aaGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATg > 1:434287/1‑150 (MQ=255) aaGGCGAAAAAGAAACCACCCCTAAAAAACTGATTGGCGCAGCGCATGCCGCATTTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGGGGGATTCACGCCA‑ACATCGTTTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATg < 1:679896/150‑1 (MQ=255) ggaaaaaaaGAAACCAACCCCAAAGAGCTGATGGGCGCAGGGCAGGCCGCATTTTCCTCAAGGGCCTTTTCATAAATGCGGGGGGAAGGGGGTTTCCCGCCA‑ACAGCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGcc < 1:323181/146‑1 (MQ=255) gcaaaaaaGGAACCACCCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATTTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAGGCGGGATTCACGCAA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCg < 1:407391/147‑1 (MQ=255) gaaaaaaaGGAACAACCCCAGAAAAATTGATGGGCGCAGCGCATGCCGCATGTTCCTCAATGGCGTTTTAATAAATGCTGGGGGAAGGGGGATCCACGCAA‑AAATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCg < 2:938510/147‑1 (MQ=255) aaaaaGGACCCAACCCGGAAGAACTGATTGGCGCGGCGCATGCCGAATGTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGGGGGATTCACGCCA‑AAATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGtt < 1:346085/150‑1 (MQ=255) aaaaaGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGtt > 1:610062/1‑150 (MQ=255) aaaaaGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGtt > 2:532535/1‑150 (MQ=255) aaaGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGtttt < 1:1004018/150‑1 (MQ=255) aagaacccaaccCTGAAGAACTGATGGGCGCAGCGCATGCCGCATTTTTCTCAAGGGCGTTTTAATAAATGCGGGGGGAGGCGGGATTCACGCAA‑ACATGGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTg < 2:713327/144‑1 (MQ=255) aaGGAACCAACCCAGAAGACCTGATTGCCGCGGGGGATGCCCATTTTTTCTCATTGGCGTTTTCATTAATGCTGGGGGAGGCGGTATCCACGCCA‑ACTTCGATTAATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTg < 2:979462/150‑1 (MQ=255) aGGAACCAACCCGGAAGAACTGATTGGCGCAGCGCATGCCGCATTTTTCTAAAGGGCGCTTTCATTAATGCGGGGGGAAGCGGGATTCACGCAA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGc < 2:672561/150‑1 (MQ=255) acccacccCTGAAGAACTGTTGGGCGCAGCGCATGCCGCATTTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGAt < 2:320675/148‑1 (MQ=255) aaccacccATGAAGAACTGTTTGGCGCAGCGCATGCCGATTTTTTCTCAATGGCGTTTTAATTAATGCTGGGGGAAGGGGGATTCACGCCA‑ACATCGTTTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGAt < 2:1067709/150‑1 (MQ=255) aaccCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTAc > 2:1029121/1‑149 (MQ=255) aaccCTGAAAAACTAATGGGCGCGGCGACGGCAATTTGTTCCTCAAGGGCTCTTTCATAAAGGCTGGGGAAAGCGGGTTTAGCACCACACA‑GGATGGTTCCAACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACg < 1:850169/150‑1 (MQ=255) tGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAAt > 1:637547/1‑150 (MQ=255) tGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAAt > 1:75956/1‑150 (MQ=255) gaagaaCTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGaaa > 1:1025189/1‑147 (MQ=255) gaagaaCTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATc > 1:462664/1‑150 (MQ=255) gaagaaCTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACACCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGaaaa < 2:268030/148‑1 (MQ=255) aagacCGGATTGGCGCAGCGCATGCCGCATGTTTCCCAATGGCGCTTCCATTAATGCTGGGGGAAGCGGGATCCCCGCCA‑ACACCGATTGATCCCCCCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAAt < 1:304360/148‑1 (MQ=255) aagaaCTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCg > 2:565995/1‑150 (MQ=255) aaCTGATTGGGCAAGCGCTGGCGGCTTGTTTCTAAATGGCGTTTTCATAAATGCTGGGGGAGGGGGGATTCACGCCA‑ACATCTATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCAc < 2:898148/150‑1 (MQ=255) gATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTg > 2:436803/1‑148 (MQ=255) aTTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTg > 1:66030/1‑147 (MQ=255) gcggcgcaGGCCGCTTGTTTCTCAATGGCGTTTTCATTAAGGCTGGGGGAGGGGGGATTCACGCCA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGaa < 2:613070/147‑1 (MQ=255) cagcgcaTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAg > 1:550229/1‑150 (MQ=255) agcgcaTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGt > 2:624819/1‑150 (MQ=255) gcgcaTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGtt > 2:815778/1‑150 (MQ=255) cgctTGCCGCTTGTTTCTCAAGGGCGCTTTCATTAATGCTGGGGGAAGGGGGATCCACGCAA‑ACATCGATTAATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTg < 1:353172/150‑1 (MQ=255) gcaTGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGCTGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGc > 2:223909/1‑150 (MQ=255) tGCCGCATGTTTCTCAATGGCGTTTTCATTAATGCTGGGGGAGGGGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGt < 1:1045153/150‑1 (MQ=255) gCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTg > 1:523851/1‑150 (MQ=255) cGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGcc > 2:204640/1‑150 (MQ=255) aTGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCggg > 2:1129533/1‑150 (MQ=255) aTGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCggg > 2:776699/1‑150 (MQ=255) tGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCggg > 2:870052/1‑149 (MQ=255) gTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGt < 1:1427/149‑1 (MQ=255) gTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTa > 2:384320/1‑150 (MQ=255) ttCTCAATGGCGTTTTAATTAGTGCGGGGGGAGGCGGGATTCCCGCAA‑ACATCGATTAATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTAt < 1:485873/149‑1 (MQ=255) ttCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTAtt > 1:966120/1‑150 (MQ=255) tctcAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTAtt > 2:185748/1‑149 (MQ=255) tctcAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTAtt > 1:992695/1‑149 (MQ=255) ctcAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGa > 2:116172/1‑150 (MQ=255) tcAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGAt > 1:1086369/1‑150 (MQ=255) ggCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCctc > 1:735186/1‑150 (MQ=255) gcgcTTTCATTAATGCTGGGGGAAGCGGGATTCACGCAA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCctct < 1:371825/150‑1 (MQ=255) gcTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTAc > 2:644314/1‑150 (MQ=255) cTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTAcc > 1:948732/1‑150 (MQ=255) ttCATTAATGCTGGGGGAGGCGGGATTCACGCAA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCt < 2:1008236/149‑1 (MQ=255) ttCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCtt > 1:625300/1‑150 (MQ=255) aTTAATGGGGGGGGAGGGGGGATTCACCCAA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTg < 2:915156/149‑1 (MQ=255) tAACGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACg > 1:195046/1‑150 (MQ=255) tggtGGGGGACGGGGCATGCACCCAA‑ACAGCGATTATTCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCa < 2:365084/147‑1 (MQ=255) gCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCa > 2:471391/1‑149 (MQ=255) gggggAAGGGGATTTAACGCAA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCTTCTACCTTTGACGGCATAAt < 2:1055587/150‑1 (MQ=255) gggAAGGGGGATTCACGCAA‑ACATCGTTTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATcc < 2:243692/150‑1 (MQ=255) gggAAGCGGGATCCACGCCA‑ACATCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATcc < 2:1180035/150‑1 (MQ=255) ggaggggggATTCACCCCA‑TCAACGATGGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCa < 1:1105657/144‑1 (MQ=255) aaGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAg > 1:1158122/1‑149 (MQ=255) gggATTCACGCCA‑ACATCGATTGATACCACCGCCGCTGTGTCGCTGGATAAAGAGGATGCCGGTTTTGCGATTACCAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGTCTCTACCTTTGACGGCATAATCCAGaaag > 2:959199/1‑149 (MQ=255) ggATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaaagc > 2:1110909/1‑149 (MQ=255) ggATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaaagc > 1:1180260/1‑149 (MQ=255) gATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaaagca > 1:1059806/1‑149 (MQ=255) aTTCACGCCA‑ACATCGATAGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaaagcaaa < 1:1139449/150‑1 (MQ=255) aTTCACGCAA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaaagcaaa < 1:131218/150‑1 (MQ=255) ttCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaaagcaa > 1:1126306/1‑148 (MQ=255) ttCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaaagcaa > 1:80760/1‑148 (MQ=255) ccccGCCA‑ACATAAATTGACACCGCCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGaaagcaaaa < 1:829621/146‑1 (MQ=255) gCCA‑CCTTCGATTGATCCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAgg < 2:134060/150‑1 (MQ=255) aCATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGc > 2:345036/1‑150 (MQ=255) cATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGcc < 1:506105/150‑1 (MQ=255) cGATTAATGCCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCg < 1:792454/149‑1 (MQ=255) gATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGt > 2:1092272/1‑150 (MQ=255) ttGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGtct < 1:170952/150‑1 (MQ=255) tACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCa < 2:507340/150‑1 (MQ=255) accaccGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAg > 1:216742/1‑150 (MQ=255) | ACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCA‑ACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAG > CP009273/1550970‑1551268 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |