| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,555,047 | T→C | 6.8% | D47G (GAT→GGT) | ddpB ← | D‑ala‑D‑ala transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,555,047 | 0 | T | C | 6.8% | 2263.9 / 9.6 | 836 | D47G (GAT→GGT) | ddpB | D‑ala‑D‑ala transporter subunit |
| Reads supporting (aligned to +/- strand): ref base T (470/245); new base C (2/92); total (478/358) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.65e-36 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 845 total aligned reads displayed.
AAAATATACGCAACTCTTCCAGCACCGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATACTCCAGAAGGTCACGTTATTTACT > CP009273/1554898‑1555196 | aaTATACGCAACTCTTCCAGCACCGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCg < 2:407541/150‑1 (MQ=255) atatACGCAACTCTTCCAGCACCGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGc > 2:32838/1‑150 (MQ=255) ataCGCAACTCTTCCAGCACCGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGGTGCTGGCGAATATTTTCCACGATAGCATCGCTg > 2:1188234/1‑150 (MQ=255) cGCAACTCTTCCAGCACCGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGgcg < 1:15765/150‑1 (MQ=255) cGCAACTCTTCCAGCACCGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGgc < 2:1028406/149‑1 (MQ=255) cGCAACTCTTCCAGCACCGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGgc < 1:1140420/149‑1 (MQ=255) gCAACTCTTCCAGCACCGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATc < 1:563006/142‑1 (MQ=255) gCAACTCTTCCAGCACCGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGgcgc > 1:734633/1‑150 (MQ=255) gCAACTCTTCCAGCACCGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGgcgc > 2:90252/1‑150 (MQ=255) ctctTCCAGCACCGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTc < 1:662871/150‑1 (MQ=255) ccAGCACCGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCAccc < 2:701320/149‑1 (MQ=255) cAGCACCGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCg < 2:1063076/149‑1 (MQ=255) cccGGACGCCCGGTACGAATGGATGTCCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGAAAAACTGTCCATACAGTGGCTGGCCCAGCCCCAGTTGCTGGCAAATATTTCCCACGATAGCACCGCTGGCGCGGTCACCCGCCAGt < 2:128704/149‑1 (MQ=255) aCCGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCCGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAg > 2:184842/1‑149 (MQ=255) aCCGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAg > 2:267074/1‑149 (MQ=255) ccGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCCGGCGCGGGCACCCGCCAGt > 1:315884/1‑149 (MQ=255) ggACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGGCCAGTCCCAGATGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCAACCGCCCGTAAc > 2:457795/1‑150 (MQ=255) cGCCGGGTACGAAGGGATGTCCCCAGGTCACCATGAAACAGGTCGCTGACGTAGGGGTAAACCTGTACATACGGGGGCGGGCCCAGCCCCAGTTGCTGGCGAATATTTTCCAGGATAGCATCGCGGGCGCGGTCACCCGCCAGTAACcgc < 2:813310/150‑1 (MQ=255) gCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACcgcg > 1:521653/1‑150 (MQ=255) ccGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGcc > 1:930783/1‑150 (MQ=255) ccGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGcc > 2:599437/1‑150 (MQ=255) ggTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCg > 1:501605/1‑149 (MQ=255) tACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGAt > 1:414902/1‑150 (MQ=255) caaaTGGTTTTCCCCGGGCCACCATAAAAAAGGTCCCGGAGGTAGCGAAAAAACTGTACATACGGTGGCGGGCCCGGCCCCGGTGGCGGGCGAATTTTTCCCACGATAGCACCGCGGGCGCGGTCCCCCGCCAGTAACCGCGCCGGATCa < 2:1102790/148‑1 (MQ=255) gAATGGTTGTTCCAAGGTCACCAAGAAACAGGTCGCGGCCGTAGGGGTAAAACTGTACAGACAGTGGCTGGCCCTGTCCCAGTTGCGGGCGAATATTTCCCAGGAAAGCATCGCTGGGGCGGTCACCCGCCAGTAACCGCGCCGGATCAc < 1:69884/150‑1 (MQ=255) gAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGCCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCAc < 1:476126/150‑1 (MQ=255) gAATGGATGTCCCCAGGTCCCCATGAAACAGGTCGCTGACGTGGCGGTAAACCTGTCAATACAGTGGCTGGTCCAGCCCCGGTTGCTGGCGAATATTTCCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCAc < 1:998417/150‑1 (MQ=255) tGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGAACACCAg > 2:113711/1‑150 (MQ=255) tGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGGCACCCGCCAGTAACCGCGCCGGAt > 1:941886/1‑144 (MQ=255) tGGATGTTCCAAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCCCCCGCCAGTAACCGCGCCGGATCACCAg < 1:1177533/150‑1 (MQ=255) ggATGTCCCCAGGTCCCCATGAAACAGGCCGCTGACGTAGCGGTAAAACTGTACATACGGTGGCTGGCCCAGTCCCAGTTGCGGGAAAATATTTCCCACGATAGCACCGCTGGCGCGGTCCCCCGCCAGTAACCGCGCCGGATCACCAgg < 2:1085648/150‑1 (MQ=255) ttccccAGGTCACCATGAAACGGGTCGCTGACGTAGCGGTAAACCTGTACATACGGTGGCTGGTCCGGCCCCGGTTGCGGGCAAATATTTCCCCCGATAGCATCGCGGGCGGGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGAt < 2:210300/146‑1 (MQ=255) ttCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGAt > 1:537523/1‑148 (MQ=255) ttCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGAt > 1:803079/1‑148 (MQ=255) ccAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGAt > 1:1094809/1‑150 (MQ=255) ccAGGTCACCAAGAAACAGGTCGCTGCCGTGGCGGAAAAACTGTACATACAGTGGCTGGCCCAGCCCCGGTTGCTGGCGAATATTTCCCACGATAGCATCGCGGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGAt < 2:168861/150‑1 (MQ=255) cAGCTCCCCATAAAAGAGGTCGCTGCGGTGGCGTAAAAACTGTACATACGGTGCCGGATCCAGTCCCGGTTGCGGGCGAATTTTTTCCAGGATAGGATCGGTGGCGGGCTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATg < 1:1121291/150‑1 (MQ=255) aGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGc > 2:716261/1‑150 (MQ=255) ggTCACCATGAAACAGGTCGCTGACGTAGGGGTAAAACTGTACATACAGTGGCTGGTCCAGCCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCGGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCg < 1:1072577/150‑1 (MQ=255) ggTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGc > 1:376832/1‑149 (MQ=255) gTCCCCATGAAACGGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGCCCAGCCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCGGGCGCGGTCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCga < 1:60601/150‑1 (MQ=255) cACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGc > 1:761466/1‑146 (MQ=255) cACCATAAAACAGGTCGCTGACGTGGCGTTAAACCTGTACATACAGTGGCTGGTCCAGTCCCATTTGCTGGCGAATTTTTCCCACGATAGCATCGCTGGCGCGGTCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCgaga < 1:120639/150‑1 (MQ=255) acaaTGAAACGGGTCGCGGACGTGGGGGTAAACCTGTACATACAGTGGCTGGCCCGGTCCCAGTGGCGGGCGAATATTTCCCACGATAGCATCGCGGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGat < 1:178390/147‑1 (MQ=255) ccATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGat > 2:978097/1‑149 (MQ=255) aTGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGataa > 1:360321/1‑149 (MQ=255) gAAACGGGTCGTGGCGGTAGCGGAAAAATTGTACATACGGGGGCGGGTCCAGCCCCGGTTGCTGGCAAATTTTTCCCAGGATAGCATGGCTGGCGGGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGAtaataa < 2:560648/150‑1 (MQ=255) aaaCGGGTCGCTGACGGAGCGGTAAAACTGTACATACGGTGGCTGGTCCAGCCCCGGTTGCTGGCAAATATTTCCCACGATAGCATCGCGGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGAtaataa < 1:90252/149‑1 (MQ=255) aaCAGGTCGCTGACGTAGGGGTAAAACTGTAAATCAAGGGGCTGGCCCAGCCCCGGTTGCGGGGAAATTTTTCCCACGATAGCATCGCGGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAAc < 2:758524/150‑1 (MQ=255) gggTCGTTGACGTAGGGGAAAACCTGTCCATACGGGGGCTGGTCAAGGCCCGGTTGCTGGCAAATTTTTCCCACGATACCCCGGGGGGGGGGGCCATCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTa < 2:832771/149‑1 (MQ=255) gTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGAAAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAAAGTAAt > 2:245764/1‑150 (MQ=255) gCTGACGTGGCGGTAAACCTGTACATCAAGTGGCTGGTCCGGCCCCAGTTGCGGGCAAATATTTCCCACGATAGCACCGCGGGCGCGGTCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCAc < 1:887274/150‑1 (MQ=255) tGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACg > 1:84969/1‑149 (MQ=255) gccGTAGGGATAAACCTATACATACAGTGGCTGGCCCAGTCCCATTTGGTGGCAAATATTTACCGGGATAACATCGGTGGCGGGGACAACCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCa < 2:1045950/148‑1 (MQ=255) gACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCGGGCGAATATTTTCCACGATAGCACCGCTGGCGCGGCCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCa < 2:521471/150‑1 (MQ=255) aCGTAGCGGAAAACCTGTACATAAAGTGGCTGGCCCAGCCCCAGTTGCGGGCAAATATTTTCCACGATAGCATCGCGGGCGCGGTCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCa < 1:719645/149‑1 (MQ=255) cGTAGCGGAAAAACTGTCCATACGGGGGCTGCCCCAGCCCCAGTTGCGGGCGAATTTTTCCCACGATAGCATCGCGGGCGCGGCCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGa < 2:681392/150‑1 (MQ=255) gTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGAc > 1:579848/1‑150 (MQ=255) tAGCGATAAAACTGTACATACGGTGGCTGGCCCAGTCCCATTTGCTGGCAAATTTTTCCCAAGATGGCATCGCTGGCGCGGTCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGAcg < 2:360227/150‑1 (MQ=255) cGGAAAACCTGTACATCCGGGGGCTGGCCCAGCCCCATTTGCGGGCGAATATTTCCCACGATAGCACCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGAcgccc < 1:32838/150‑1 (MQ=255) aaaaCTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGcca > 1:1006503/1‑150 (MQ=255) aaCTGTACATACAGTGGCTGGTCCAGTCCCCGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGCGATAATAAACGTAATCACGCCGACGCCCGccacc > 2:1117153/1‑150 (MQ=255) aaCTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGccac > 2:48097/1‑149 (MQ=255) aCTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGccaccc > 2:299336/1‑149 (MQ=255) tGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCcaccac > 1:679440/1‑149 (MQ=255) acatacaGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAg > 1:854296/1‑149 (MQ=255) aGTGGCTGGTCCCGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCCGGGGTCAGAAGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGc > 1:510917/1‑150 (MQ=255) aGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGGAATCACGCAGACGCCCGCCACCACGAGCACCAGc > 1:397776/1‑150 (MQ=255) tGGCTGGTCCGGCCCCGGTTGCGGGCAAATTTTTCCCACGATAGCACCGCGGGCGCGGTCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGccc < 2:579848/150‑1 (MQ=255) tGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGccc > 2:44145/1‑150 (MQ=255) gCTGGCCCAGCCCCAGTTGCGGGCAAATTTTTCCCACGATAGCTCCGCGGGCGGGGTCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGccccc < 1:820029/150‑1 (MQ=255) cTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGcccc > 1:644010/1‑148 (MQ=255) ggTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCcag > 2:506565/1‑149 (MQ=255) ccAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCagcagc > 2:1150644/1‑150 (MQ=255) ccAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCagcagc > 2:735515/1‑150 (MQ=255) ccAGTCCCAGTTGCGGGCGAATTTTTTCCAGGATGGCATGGCTGGGGCGGTCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCagcagc < 1:433657/150‑1 (MQ=255) cAGTCCCAGTTGCGGGCAAATATTTTCCACGATAGCATCGCGGGCGCGGCCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCg < 1:221188/150‑1 (MQ=255) ccAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGc > 2:636789/1‑150 (MQ=255) cAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCg > 2:654859/1‑150 (MQ=255) cAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCg > 1:241747/1‑150 (MQ=255) cAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCg > 1:1064136/1‑150 (MQ=255) aGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCg > 2:143533/1‑149 (MQ=255) cgggCGAATATTTCCCACAAAAGCACCGGGGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAAt < 1:448586/148‑1 (MQ=255) cgggCAAATTTTTCCCAGGATAGCATCGCTGGCGCGGTCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTaaaa < 1:29220/147‑1 (MQ=255) ggaaattatTTCCCGCGATACCATCGCTGGGGCGGCCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATAc < 2:930783/144‑1 (MQ=255) ggCAAATATTTCCCACGATAGCATCGCGGGCGGGCCCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATAc < 2:417531/150‑1 (MQ=255) cGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATACTc > 2:793101/1‑150 (MQ=255) aaTTTTTCCCAGGATAGCACCGCGGGGGGGGTCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATACTCCa < 1:205691/150‑1 (MQ=255) aaTTTTTCCCACGATAGCATCGCTGGCGCGGTCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATACTCCa < 1:598297/150‑1 (MQ=255) aaTATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGataat < 1:27864/81‑1 (MQ=255) ttttCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATACTCCAGAAg > 2:385538/1‑150 (MQ=255) tttCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATACTCCAGAAgg > 1:954188/1‑150 (MQ=255) tttCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATACTCCAGAAgg > 2:873894/1‑150 (MQ=255) cccACGATAGCATCGCGGGCGGGCTCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATACTCCAGAAGGt < 2:84969/148‑1 (MQ=255) aCGATAGCATCGCGGGCGCGGCCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATACTCCAGAAGGTCACg < 1:622856/150‑1 (MQ=255) cGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATACTCCAGAAGGTCACGt > 1:1041487/1‑150 (MQ=255) cGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATACTCCAGAAGGTCACGt > 2:620951/1‑150 (MQ=255) gATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATACTCCAGAAGGTCACGt > 2:952050/1‑149 (MQ=255) aTCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATACTCCAGAAGGTCACGTTATTTAc > 2:223428/1‑150 (MQ=255) aTCGCTGGCGCGCTCCCCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATACTCCAGAAGGTCACGTTATTTAc < 1:978097/150‑1 (MQ=255) | AAAATATACGCAACTCTTCCAGCACCGGACGCCCGGTACGAATGGATGTTCCCAGGTCACCATGAAACAGGTCGCTGACGTAGCGGTAAAACTGTACATACAGTGGCTGGTCCAGTCCCAGTTGCTGGCGAATATTTTCCACGATAGCATCGCTGGCGCGGTCACCCGCCAGTAACCGCGCCGGATCACCAGGGATCAGATGCGAGATAATAAACGTAATCACGCAGACGCCCGCCACCACGAGCACCAGCCCCCAGCAGCGTTGGCGTAAAATACTCCAGAAGGTCACGTTATTTACT > CP009273/1554898‑1555196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |