| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,033,606 | G→C | 15.1% | P216P (CCG→CCC) | yedY → | membrane‑anchored, periplasmic TMAO, DMSO reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,033,606 | 0 | G | C | 15.1% | 168.3 / 3.1 | 68 | P216P (CCG→CCC) | yedY | membrane‑anchored, periplasmic TMAO, DMSO reductase |
| Reads supporting (aligned to +/- strand): ref base G (26/31); new base C (8/3); total (34/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
GAACCTACCAGCAATGCGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCAGTATTAAGCTGACCCGCGAGCGTCCGCCAAC > CP009273/2033463‑2033752 | gAACCTACCAGCAATGCGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTcaca < 1:1052979/150‑1 (MQ=255)gAACCTACCAGCAATGCGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTcaca < 1:911102/150‑1 (MQ=255) aaCCTACCAGCAATGCGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCacac < 1:782710/150‑1 (MQ=255) ccTACCAGCAATGCGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGGTGGAATATTCTTATGTCGAAGGGATTCGTTTCCACGAAGCCAAGCATCCCCCCCCACtg > 2:331252/1‑150 (MQ=255) ccAGCAATGCGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGGTGAAAAATTCTTATTTCGAAGGATTTCGTCTCGACGAAGCAAAGCATCCGCTCACCCttatga > 1:935682/1‑150 (MQ=255) ccAGCAATGCGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACtgat < 1:723532/148‑1 (MQ=255) aGCAATGCGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGGTGAAAAATTCTTATGTTGAAGGGTTTTGTCTCGACGAAGCAAAGGATTCCCCCACACtgatgaac > 1:378423/1‑148 (MQ=255) cAATGCGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGt < 1:407026/150‑1 (MQ=255) tGCGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGGTGGAAAATTCTTATTTCGAAGGATTGCGGCTCGACGAAGCAAAGCAACCCCTCACCCTGATGACCGGAgg > 2:603428/1‑150 (MQ=255) cGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGgtg < 2:530458/150‑1 (MQ=255) cGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGgt < 2:1169338/149‑1 (MQ=255) cGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGgt < 2:809158/149‑1 (MQ=255) aaGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGtt < 1:102510/150‑1 (MQ=255) aaGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAAAATCCCTATTTCGAAGGATTGCGGCTCGGCGAAGCAAAGCATCCGCTCCCACTGATGACCGGAGGGGtt > 1:1066631/1‑150 (MQ=255) tATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTAt < 1:100793/150‑1 (MQ=255) tGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATgg < 1:158672/150‑1 (MQ=255) tCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCa < 2:921912/150‑1 (MQ=255) tCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGc < 1:942704/148‑1 (MQ=255) aCAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCg < 2:608718/150‑1 (MQ=255) aTTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAAAATCCTTTTGTCGAAGGAATTCGTCCCGACGAAGCAATGCATCCCCTCCCACTGATGAGCGTAGGGGTTTATAGCAAGGCGGTACCGccc > 1:1087974/1‑149 (MQ=255) tATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGGCGAAATATCCTTATGTCGAAGGATTGGGTCCCGACGAAGCAAAGCATCCGCCCACCCCGATGACCGTAGGGGTTTATGGCAAGGCGGTTCCGCccca > 1:639800/1‑149 (MQ=255) aTGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGGTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAAAGCATCCGCCCACACTGATGACCGTAGGGGTTTATGGCAAGGCGTTACCGCCACaa > 1:8802/1‑149 (MQ=255) aTGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGCGGGGTTAAATATTCTTATGTTGTAGGGTTTCGTCTCCACGGAGCAAAGCATCCGCTCACACTGATGACCGCAGGGGGTTATTGCAAGGCGTTACCGCCACaa > 2:402720/1‑149 (MQ=255) aCCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGGTGAAATATTCCTATTTCGGAGGATTTGGGCTTGACGCAACAAAGCATTCCCCCCCACCGATGACCCTAGGGGGTTATTGCAAAGCGGTACCCCCCCAAAAtag > 1:488677/1‑148 (MQ=255) aCCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATgg < 2:1019296/150‑1 (MQ=255) gATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGGTGAAAAATCCTTATTTCGAAGGGTTTCGTCTCGACGAAACAATGCATCCCCCCACACCGATGACCGGAGGGGGTTATGGCAAAGCGTTACCGCCACAAAAAGGCGCGCCggg > 1:134051/1‑149 (MQ=255) aTGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGCCCGTAGGTGTTTATGGCAGGGCTTTGCCGCCACAAAATGGCGCGCCGGTg < 1:877759/150‑1 (MQ=255) gccaggccagCAGGACCGCTTTATCGGCGGTGGGCTGAAAAATTCTTATGTCGGAGGATTGCGTCTCGGCGGAGGAAAGCATCCGCTCCCACTGATGAACGTAGGGGGTTTTTGGAAGGGGGTACCGCCACAAAAAGGCGGGCCGGGGCg > 2:78343/1‑150 (MQ=255) ccaggccagCAGGACCGCTTTATCGGCGGTGGGGCGAAAAATCCTTTTTTCGGAGGGGTGCGTCTCGACGGAGCAAAGCATCCCCCCCCACCGATGGCCGTAGGGGGTTTTTGCAAGGGGGTTCCCCCCCAAAAAAGGGCGCCGGGGCgg > 2:225487/1‑149 (MQ=255) caggccagCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGAAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGAAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGAc < 1:405722/150‑1 (MQ=255) aggccagCAGGACCGCTTTATCGGCGGTGGGGTGGAAAATTCTTATTTCGAAGGGTTGCGGCTCCACGAAGCAATGCATCCCCCCCCACCGATGACCGGAGGGGGTTATTGCAAAGCGGTACCCCCCCCAAAAGGCGCGCCgggggggcc > 1:957756/1‑143 (MQ=255) cagcagGACCGCTTTATCGGCGGTGGGCTGAAATTTCCTTATGTCGAAGGATTGCGTCTCGAGGAAGCAATGCATCCGCTCACACGGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGAtt < 2:101632/150‑1 (MQ=255) agGCCCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCCCCCTGATGCCCGGAGGTGTTTATGGAAGGGCTTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGc < 2:74037/150‑1 (MQ=255) agGACCGCTTTATCGGCGGTGGGGTGAAATATTCTTATTTCGAAGGATTTCGTCTCCACGAAGCAATGCATCCGCTCACACCGCTGACCGTAGGTGTTTTTTGCAAAGCGGTACCCCCCCAAAAAAGCGCGCCCGGGCGGCTGGTtttgg > 2:769636/1‑149 (MQ=255) tgtCGGCGATGGTCTAAAATATCCTTATGTAGAGGGATGCCGTCTCGGCGAAGCAATGAATCCCCTCCCACTTATGACCGTGGGTTTTTATGGAAAGCGTTTGCCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAat < 1:991163/147‑1 (MQ=255) aTCGGCGGTGGGCTAAAATATCTTTATGTCGAAGGATTGCGTCCGGACGAAGCAATGCACCCGCTCCCACTGATGACCGTGGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAata < 1:645901/149‑1 (MQ=255) gggggggCTAAAATATCCTTATGTAGAAGGATTGCGTCCCGACGAAGCAATGCTTCCGCTCCCACTGATGCCCGTAGGTTTTTATGGCAGGGCTTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCtt < 2:843539/146‑1 (MQ=255) gTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCttt > 1:20114/1‑149 (MQ=255) gTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCttt > 2:9680/1‑149 (MQ=255) ggCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAg > 2:498305/1‑150 (MQ=255) ggCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAg > 2:454236/1‑150 (MQ=255) ggCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAg > 2:421465/1‑150 (MQ=255) ctaaaaTATCCTTATGTCGAAGGATTGCGTCTCGACGAAGAAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAGGGGGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAggg < 2:993983/147‑1 (MQ=255) cTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAgg > 2:396283/1‑149 (MQ=255) aaaTATCCTTATGTGGAGGGATGGCGTCCCGACGAAACAATCCACCCGCTCACCCGGTAGACGGTAGGTGTTTATGGCAGGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGAtt < 2:204757/150‑1 (MQ=255) aaaTATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGAt > 1:171969/1‑149 (MQ=255) aaaTATCCTTATGCCGAAGGATTGCGTCTCGACGAAGCAATGCATCCCCTCACACTGATGACCGTAGTTTTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGAt < 2:425025/149‑1 (MQ=255) aaTATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGAtt > 2:496771/1‑149 (MQ=255) tatCCTTATGTCGCAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGTTGACCGTAGGTGTTTATGGCAAGTCGTTACCTCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTaaa > 2:846584/1‑150 (MQ=255) tATGTCGAAGGATTGCGTCTCGACGAAGCAATGCACCCGCTCACACTGATGACCGTGGGTGTTTATGGAAGGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGAt < 2:1087974/149‑1 (MQ=255) acggggAAGGTTTGCGTCTCGAGGAGGAAAGGCATCCGCTCACACTGATGACCGTGGGTTTTTATGGCAAGGCATTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATa < 2:260242/144‑1 (MQ=255) aTGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGCGGAAATATGGCTTTAAAGGGATTAAATCGATAg > 2:593351/1‑150 (MQ=255) tGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACGGTAGGTGTTTATGGCAAGGGGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGt < 1:774458/150‑1 (MQ=255) tGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGt > 1:286070/1‑150 (MQ=255) tCGAAGGATTGCGTCCGGACAAAGCAATGCACCCCCTCACACTGATGCCCGTGGGTGTTTAGGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCa < 2:8802/150‑1 (MQ=255) tCGAAGGATCGCGTGCGGCCAAAGCAATGTGTCCGCTCGCGCGGACGACCGTAGATTTTTATGAAAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTc < 2:5394/149‑1 (MQ=255) ggATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCAGTAt > 1:63810/1‑149 (MQ=255) gATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCAGTAtt > 1:566861/1‑149 (MQ=255) gATTGCGTCTCGACGAAGAAATGCATCCGCTCACCCTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCAGTATTa < 2:716322/150‑1 (MQ=255) aTTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCAGTAtt > 2:63829/1‑148 (MQ=255) tGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCAGTATTAAGc > 1:485035/1‑150 (MQ=255) tctcGACGAAGCAATGCATCCGCTCACACTGATGCCCGTAGGTGTTTATGGAAAGGCTTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCAGTATTAAGCTGAc < 1:78343/150‑1 (MQ=255) cgacgaAGCAATGCATCCGCTCACACTGATGCCCGTAGGTTTTTATGGCAGGGCTTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCAGTATTAAGCTGACCcg < 1:331252/150‑1 (MQ=255) cgacgaAGCAATGCATCCGCTCACACTGATGACCGTAGGTTTTTAGGGAAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCAGTATTAAGCTGACCcg < 1:1139693/150‑1 (MQ=255) cgacgaAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCAGTATTAAGCTGACCcg > 2:263246/1‑150 (MQ=255) gCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCAGTATTAAGCTGACCCGCGAGCGt > 2:945739/1‑150 (MQ=255) aaTGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAACTCGATAGTCAGTATTAAGCTGACCCGCGAGCGTcc > 2:463680/1‑150 (MQ=255) tCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCAGTATTAAGCTGACCCGCGAGCGTCCGCCAac > 2:660833/1‑150 (MQ=255) | GAACCTACCAGCAATGCGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCAGTATTAAGCTGACCCGCGAGCGTCCGCCAAC > CP009273/2033463‑2033752 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |