| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,145,170 | G→T | 26.8% | intergenic (+43/+22) | yegJ → / ← yegK | uncharacterized protein/ser/thr phosphatase‑related protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,145,170 | 0 | G | T | 26.8% | 69.9 / 12.5 | 61 | intergenic (+43/+22) | yegJ/yegK | uncharacterized protein/ser/thr phosphatase‑related protein |
| Reads supporting (aligned to +/- strand): ref base G (27/17); new base T (7/10); total (34/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGTATACGCGCGGGGATAAAATTTACGGCGGTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGC > CP009273/2145021‑2145314 | tGTATACGCGCGGGGATAAAATTTACGGCGGTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑ttgttg < 2:1446512/150‑1 (MQ=255)tGTATACGCGCGGGGATAAAATTTACGGCGGTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑ttgttg < 2:292536/150‑1 (MQ=255) taCGCGCGGGGATAAAATTTACGGCGGTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCt < 2:625014/149‑1 (MQ=255) cgcgcgGGGATAAAATTTACGGCGGTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCa < 1:479293/150‑1 (MQ=255) cgGGGATAAAATTTACGGCGGTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCAA‑CCg < 2:527211/150‑1 (MQ=255) cgGGGATAAAATTTACGGCGGTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCAA‑CCg < 2:774579/150‑1 (MQ=255) cgGGGATAAAATTTACGGCGGTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCAA‑CCg < 1:90256/150‑1 (MQ=255) ggggATAAAATTTACGGCGGTTATAACATTTATTCTTTTTTTGTGACCTATCCCAAAAAAAAAACCGACGAGCTAAAAACAAAAATAATTTGCTAATCAACCCTTATTTTTATTTTTTTAAATTGCGGGTTGAA‑TTTTTTTTTTTAA‑ccc > 1:920480/1‑149 (MQ=255) cggcggTTATACCATTGATCCTTTATTTGTCACCTATCCAAAAGAAGAAGCCGGCGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGGTGGA‑TTTTTTTTTTTCA‑CCCCCCCGAGaaaaccac > 2:392087/1‑145 (MQ=255) ggcggTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGGTTAA‑TTTTTGTTTTTAA‑ACGCCAAGAGAAaattact > 1:1309117/1‑150 (MQ=255) ggTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTTTCTTCAA‑CCGCCATGAGAAAATCACTCTg > 2:1310454/1‑150 (MQ=255) ggTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAAATCACTCTg > 2:213358/1‑150 (MQ=255) ataCCTTTGATCTTTTATTGGTCACCTATCAAAAAGAAGAAGCCGACGAGCTAAGAGAAAAATTAGTTCGCTAATCAGCCTTTATTTTTT‑TTGTTAAAACGGGCGGTTGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGccc < 2:583524/149‑1 (MQ=255) taCCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCAA‑CCGCCCTGAGAAAATCACCCTTCCca > 1:55196/1‑149 (MQ=255) cttttGATCTTTTATTGTTCCCCTATCCAAAGGAAAAACCCGGCGTGGTAAAAAAAAAATTTGTCCGCTATTCAGCGGTTTTTTTTA‑TTGTTTAAGCTGGGGTTTGAT‑TTGTTTTTTTCAG‑CCGCCATGAGAAACTCACTCTGCCcaca < 1:1042841/146‑1 (MQ=255) aTTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAgcg > 1:1253508/1‑150 (MQ=255) tATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTTTTTTCAA‑CCGCCTGGAGAAACTTAACCTGCCCCCAGCGCCAGTGCCaa > 1:1076727/1‑150 (MQ=255) cACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAAATCACTCTGCCCACAGCGCCAGTGCCAACGTTTTa > 1:279689/1‑150 (MQ=255) ccTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCAA‑ACGCCCTGAGAAAATCACTCTGCCCACAGCGCCAGTGCCAACCTTTTat > 2:1017081/1‑149 (MQ=255) aTCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTTTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTatcat > 1:745257/1‑149 (MQ=255) aaaaaaaAGAAGCCGACGAGATAAGAAAAAATTTATTTCGCAAAACAGCTTTTATATTTT‑TTTTTTAACCGGGGGGTTAAT‑TTTTTGTCTCAAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTatcatcatc < 1:747189/149‑1 (MQ=255) aaaaaGAAGAAGCCGACGAGCTAAAAGAAAATTTAGTTCGCTAATCAGCCGTTATTTTTA‑TTGTTTAACCTGGCGGTTGAT‑TTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTatcatcat < 2:632055/148‑1 (MQ=255) aaaaaaGAAGCGGACGAGAAAAGAGAAAATTTTTTTCGCTAACCAGCCGTTATATTTT‑TTTTTAAACCGGGCGGTTGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCg < 2:856477/150‑1 (MQ=255) aaaGAAGAAGCCGACGAGCAAAGAGAAAAATTATTTCGTTAACCAGCCGTTATTTTTA‑TTGTTAAAACTGGCGGTTGAT‑TTGTTGTCTTAAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCg < 2:231977/150‑1 (MQ=255) aagaagCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTTAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGCTTTATCATCATCCGTACg > 2:923811/1‑150 (MQ=255) aaaaagCAGAGGAGCAAAGAAAAAAATTAGTTCGATAATCAGCCTTTATATTTA‑TTTTTAAAACTGGCGGTTGAA‑TTTTTGTCTCAAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACg < 1:840804/147‑1 (MQ=255) ccGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGGA‑TTTTTGTCTTCAA‑CCGCCATGAGAAAATCACTCTGCCCACAGCGCCCGTGCCAACGGTTTTTCATCATTCGTACGCCCGtt > 2:1132071/1‑150 (MQ=255) cgacgaGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTTAA‑TTGTTGTCTTTAA‑CCGCCCTGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGGTTTATCATCATCCCGACGCTCGtt > 1:498634/1‑149 (MQ=255) gacgaGTAAAGAAAAAAATTAGTTCTATAATCAGCCTTTATTTTTA‑TTTTTTAACCTGGGGGTTAAT‑TTGTTTTTTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTa < 2:55196/150‑1 (MQ=255) gacgaGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAAATCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTa > 1:758524/1‑150 (MQ=255) cTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTTTTTTTTTTAA‑CCGCCATGAGAAACTCACTCTTCCCACAGCGCCCGTGCCAACGTTTTATCATCATCCCTACGCTCGTTTTccgccg > 2:1186550/1‑150 (MQ=255) agCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAAATCACTCTGCCCACAGCGCCAGTGCCAACGGTTTATCATCATCCGGACGCCCGTTTACCGCCGGGCTg > 1:426891/1‑150 (MQ=255) cAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGGTGTTTTCAA‑CCGCCTAGTGAAACTCACACTCCCCACAGCGCCCGTGCCAACGTTTTTTCATCATCCGTACCCTTGTTTAACGCCGGGCTggg > 2:1283207/1‑149 (MQ=255) aaaaTTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTTTTGTCTTCAA‑CCGCCATGAGAAAATCACTCTGCCCACAGCGCCAGTGCCCACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGa > 2:105456/1‑149 (MQ=255) aaTTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGGCAACGGTTTTTCATCATCCCTACGCTCGTTTAACCCCGGGCTGGGCa > 2:48204/1‑149 (MQ=255) attattCCGCTAATCAG‑CTTTTTTTTTT‑TTTTTTAAAGCGGGGGTTTAATTTGTGGTCTCAAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACaaa < 2:498634/150‑1 (MQ=255) tAGTTCTCTAATCACCTTTTATTTTTT‑TTTTTAAACCTGGGGGTTAAT‑TTGTTGTCTCCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACaaaa < 2:279689/149‑1 (MQ=255) aGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGGTGAA‑TTGTTGTCTTCAA‑ACGCCATGAGAAAATCACTCTGCCCACAGCGCCAGTGGCAACGGTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACaaaaa > 2:1005447/1‑149 (MQ=255) gTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTTTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTTTCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACt > 2:85759/1‑150 (MQ=255) tccGCTAACCCGCCTTTATTTTTT‑TTTTTTAAACGGGGGTTTAAT‑TTGTTTTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACt < 2:1047235/147‑1 (MQ=255) cccTAATCAGCGTTTATTTTTA‑TTTTTTAACCGGGCGTTTAAT‑TTTTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGc < 1:858634/147‑1 (MQ=255) cGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTTTCTTCAA‑CCGCCATGAGAAAATCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCCTACGCCCGGTTACCGCCCGGCTGGACAAAAAATGCt > 2:23621/1‑150 (MQ=255) aTCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTaa > 1:155144/1‑149 (MQ=255) tCAGCCGTAATATTTA‑TTGTTAAAACGGGGGTTTGAA‑TTGTTTTCTCAAG‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACa < 1:1366604/150‑1 (MQ=255) cAGCCTTTATATTTT‑TTTTTAAACCTGGGGTTTAAT‑TTTTTTTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACaa < 1:290263/150‑1 (MQ=255) aGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTTAA‑CCGCCCTGAGAAACTCACTCTGCCCACAGCGCCAGTTCCAACGTTTTATCATCATCCGTACGCTCGTTTATCGCCGGGCTGGACAAAAACTGCTTTAACAAt > 1:141342/1‑150 (MQ=255) cctttATATTTT‑TTGTTAAAACGGGGGGTTGAT‑TTTTTGTCTCCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTc < 1:87293/147‑1 (MQ=255) gTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAAAATTCAg > 1:312477/1‑150 (MQ=255) tataTTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTTAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGGGCCAACGGTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAgg > 1:1190146/1‑149 (MQ=255) tttta‑ttGTTTAACCGGGGGTTTGAT‑TTGTTTTCTCCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGtaa < 1:1310454/148‑1 (MQ=255) attta‑ttGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGtaa > 1:72891/1‑149 (MQ=255) ttta‑ttGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTTAA‑CCGCCATGAGAAACTCACTCTTCCCACAGCGCCAGTGCCAACGGTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGtaat > 1:402869/1‑149 (MQ=255) tta‑ttGTTTAAACTGGCGGTTTAA‑TTGTTGTCTTCAA‑CCGCCCTGAGAAAATCACCCTGCCCACAGCGCCAGTGCCCACGTTTTTTCATCATTCGTACGCTCGTTTACCGCCCGGCTGGACAAAAACTGCTTTTACAATTCAAGgaata > 2:1462760/1‑149 (MQ=255) a‑ttTTTTAAACTGGCGGTTAAA‑TTGTTTTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGAAATaaa < 2:690846/149‑1 (MQ=255) ttGTTAAAACGGGGGTTTAAA‑TTTTGGTCTAGAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATc < 2:811104/150‑1 (MQ=255) ttttaaaaCTGGCGTTTAAT‑TTTTTTTCTCCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATc < 2:1061222/144‑1 (MQ=255) aaCTGGCGGTTGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAgttgt > 2:381123/1‑150 (MQ=255) ggcgTTTAA‑TTGTTTTTCTCAACCCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCt < 2:426891/147‑1 (MQ=255) ggtttGAT‑TTTTTGTTTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGc < 1:797949/147‑1 (MQ=255) cGGTTGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGc > 1:1126348/1‑150 (MQ=255) ggTTGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCg > 1:1119909/1‑150 (MQ=255) ttGAA‑TTGTTTTCTCAAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGtt < 2:23557/150‑1 (MQ=255) tGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTtg > 1:211138/1‑150 (MQ=255) attttttgtCTTAAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTtgct < 2:865662/145‑1 (MQ=255) ttgttaTCTACAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTtgctgc < 1:1217865/150‑1 (MQ=255) | TGTATACGCGCGGGGATAAAATTTACGGCGGTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTA‑TTGTTTAAACTGGCGGTTGAA‑TTGTTGTCTTCAA‑CCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGC > CP009273/2145021‑2145314 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |