| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,978,089 | A→C | 24.7% | M288R (ATG→AGG) | yqeF ← | short chain acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,978,089 | 0 | A | C | 24.7% | 150.1 / 18.6 | 89 | M288R (ATG→AGG) | yqeF | short chain acyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (19/47); new base C (17/6); total (36/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.07e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGGATGATGCATTACCCGCTGTCACAGAACC > CP009273/2977941‑2978237 | gacCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCa < 2:1444310/149‑1 (MQ=255) acCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCAt < 2:1172746/149‑1 (MQ=255) cGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAAt < 2:760302/150‑1 (MQ=255) gACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATg < 1:616968/150‑1 (MQ=255) cGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGcc < 1:647747/150‑1 (MQ=255) cGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGGCCGACACCCCCGCCCAATTTCCATCaaatcc > 1:186956/1‑146 (MQ=255) tCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCt < 2:366604/150‑1 (MQ=255) tCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCt < 1:586715/150‑1 (MQ=255) cTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCCGGCAACGGCGGGGCGCAAAAACCCGCGCAAATCCCCTCCAAGCCCGTTCTacac > 2:1339845/1‑149 (MQ=255) cAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGGCGCATACACCCGCGCAATTCCCCACAAAGCCCGGTCTACACCaa > 1:848260/1‑150 (MQ=255) aaGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCa < 1:901518/148‑1 (MQ=255) aaGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAAc < 1:825025/150‑1 (MQ=255) gCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGAACTACACCAACGc > 1:394149/1‑150 (MQ=255) aTCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTg < 1:405809/150‑1 (MQ=255) ccAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGGCCCAAACACCGGCCCACATTTCATCAATACCGGAACTACACAAAAACAGGCaaac > 1:614357/1‑149 (MQ=255) aaCCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGGCGCATACACCCGCGCACTTCCCATCACTTCCGGCTCTACACCCACACCGGAAAATgc > 2:930747/1‑150 (MQ=255) aaaGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCCTACACCCGCGCAATTCCCATCAATGCCCGATCTACACCAACCCTGGCAAATGcgcgg > 2:1210507/1‑148 (MQ=255) aaGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATATTCCGGCACAATACCGAGCACTGCGAGATCTACACCAACGCTGGCAAATGCGCGAAt < 2:1370667/150‑1 (MQ=255) aaGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCTGAGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAAt < 2:1073668/150‑1 (MQ=255) aGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATg < 1:33827/150‑1 (MQ=255) aGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGGCGCCAAAACCCGCGCCAATCCCCCCCATGCCGGGTCTTCACCCACCCCGGCCAAAGCCCGGATg > 2:1276659/1‑150 (MQ=255) gcCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCACCTACCCGCGCTATTTCCCTTAATGCCGGGTCTTCACCAACACCCGCAAAAGCACGaaatgtc > 1:76339/1‑145 (MQ=255) gcCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGGCGCATACACCCGCGCCATTTCCATCCATGCCGGGTCTACACCAACGCCGGCCAATGCGCGaa > 2:1437515/1‑145 (MQ=255) ccTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAAt < 1:1437515/145‑1 (MQ=255) gcagcaAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCCGCGCAATTCCCCTCAATGCCCGATCTACACCCACGCTGGCAAAAACGCGCATGCGGGCCCGc > 2:225658/1‑150 (MQ=255) cagcaAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATTCACCGTAGCAATACCGCGCCATCCGAGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCa < 2:242904/150‑1 (MQ=255) cagcaAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGc < 1:767221/149‑1 (MQ=255) agcaAGCGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑c < 1:610950/150‑1 (MQ=255) aaaCGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCCTACACCCGCGCAATTCCCCTCAATTGCGGGTCTACACCAAACCTGGCCAAAGCGCGAAAGCGGGCCAGCA‑Cggg > 1:1164736/1‑150 (MQ=255) aCGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTa < 1:111056/150‑1 (MQ=255) aCGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTa < 1:977455/150‑1 (MQ=255) gCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTaaa < 1:406008/150‑1 (MQ=255) cTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAAt < 2:395393/150‑1 (MQ=255) cATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGGCGCCTACACCCGCGCAATTTCCATCAATGCCGGAGCTACCCCAACACTGGCCAAAGCGCGAAAACGGGCCACCACCGGGAAAAtt > 1:470325/1‑149 (MQ=255) aTTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGAGCGATTCGCCGCAATGCGGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCa < 2:473823/149‑1 (MQ=255) ttAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTTCCATCAATGCCGGAACTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGGAAAATCAAc > 1:1418545/1‑150 (MQ=255) tAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTTGCCTAAACCCGCGCCAATCCCCTCCATGCCCGGTCTCCACCACCCCTGGGAAATGCGCGGATGTGGGGGCCCA‑CGGGGAAATTTaaag > 2:1016561/1‑148 (MQ=255) tAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCCTACACCCGCGCACATTCCACCAAAGCCGGGTCTACCCCAACCCTGGGAAAAGCGCGAAAACCGGGCAGCA‑CGGGGAAATTCAACg > 1:857336/1‑150 (MQ=255) gCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATTCACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCt < 2:304000/150‑1 (MQ=255) cTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGGCGCCTACACCCGCGCACTTCCCCTCAATGCCGGATCTACACCAACGCCGGCAAAAGCGCGAATGCGGGCCAGCA‑CCGGGAAAATCAACGCTcc > 1:593953/1‑149 (MQ=255) gATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCGCAGCAATGCGGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTg < 2:327116/149‑1 (MQ=255) gATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGt < 1:496962/148‑1 (MQ=255) gATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGt < 2:1153323/148‑1 (MQ=255) aaGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATAAACCCGCGCAATTCCCCTCAAAGCCCGATCTACACCAACGCTGGCCAATACGCGAAAGCGGGCCAGCA‑CGGGGAAAATCAAAGCCCGTGCttt > 1:710003/1‑150 (MQ=255) aGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCttt < 1:1103643/149‑1 (MQ=255) gATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTgg < 1:225658/150‑1 (MQ=255) gACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATTCTTCTGAATGATACGGCGCCAACCGAGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTc < 2:717060/150‑1 (MQ=255) gACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGGCGCATACACCCGCGCCATTTCCCCCCATGCCGGATCTTCACCCAAGCTGGCAAATGCGCGGAAGGGGGCCCGCA‑CCGGGAAAATTAAAGCTCGTGCTTTTGCttt > 1:758579/1‑149 (MQ=255) aCTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCCATTCCCCTCCATTCCGGATCCACACCAACGCCGGGAAAATCGCGCAATCGGGCCAGCC‑CGGGGAAATTCAACGCTCGTGCTTTTGCtttg > 2:874777/1‑148 (MQ=255) aGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCCGCGCAATTTCCCTCAATGCCGGGTCTACACCAACCCTGGCAAATGCGCGAATGCGGGGCCGCA‑CGGGGAAAATCAACGCCCGTGCTTTTGCTTCGCtcat > 1:389360/1‑150 (MQ=255) aaCTGCCAGCCTACACGCTCCCGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCtcatcatc < 1:1339845/150‑1 (MQ=255) cTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACCCCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTcatcatcat < 1:1315994/150‑1 (MQ=255) tGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCCGCGCCATTCCCATCCATTCCGGGTCTACACCAACACTGGGAAAAGCGCGAAAACGGGCCCGCA‑CGGGTGAAATTAACGCTCGCGCTTTGGCCTCTCTCATCATCAtt > 2:609140/1‑150 (MQ=255) ccAGCCTACACGCTCCAGGCAACGGCGGGTCGCATTTTCTTTAATGATTCGGCGCCCACCGAGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTa < 2:1257325/149‑1 (MQ=255) ccAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACTCCGGAGCAATTCCCCGCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCAtt < 2:1314425/148‑1 (MQ=255) ccAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCAtt < 1:1210507/148‑1 (MQ=255) ccAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACAACCGCGCAATTTCCATCAATGCCGGATCTACACCAACGCCGGCAAAAGCGCGAAAGCGGGCCAGCA‑CGGGGAAAATTAAAGCTCGTGCTTTTGCTTCGCTCATCATCATTAc > 2:783288/1‑150 (MQ=255) ccAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACAACCGCGCAATTCCCCTCCATGCCGGAGCTACACCAACGCCGGCAAAAGCGCGAATGCGGGGCAGCA‑CGGGGAAATTCAACACCCCTGCTTTTGTTTCGCTCCTCATCAtttc > 2:157841/1‑148 (MQ=255) cAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTAcc < 1:1016561/150‑1 (MQ=255) cAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTAcc < 1:1245298/150‑1 (MQ=255) ccTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGAGCAATACGCAGCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCa < 2:186956/150‑1 (MQ=255) tACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCCTCAATGCCTGGTCTACACCAACGCTGGCAAATGCGCGAATGCGGGGCAGCA‑CGGGGAAATTCAACCCGCGTGCTTTGGCTTCGCTCATCATCATTACCGCaac > 1:906951/1‑148 (MQ=255) tACACGCTCCAGGCAACGGCGGGTCGCATACACCCGCGCAAATCCCATCAATGCCGGATCTACACCAACACCGGGAAAAACGCGAATGCGGGCCCGCA‑CGGGGAAAATCAAAGCTCGTGCTTTTGCTTCGCCCCCCATCATTACCGCaac > 2:1345892/1‑148 (MQ=255) acacGCTCCAGGCAACGGCGGGTCGCATACACCCGCGCAATTCCCCTCCATGCCCGGTCTACACCAACCCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGGAAAATTAACGCCCGCGCTTTGGCTTTGCTCATCATCCTTTACGCAGcc > 2:543749/1‑149 (MQ=255) cacGCTCCAGGCAACGGCGGGTCGCATACTCCGGCACGATTCCCAGCCAAGCGGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTg < 2:1437148/150‑1 (MQ=255) cacGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTg < 1:583800/150‑1 (MQ=255) acGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTgc < 2:985999/150‑1 (MQ=255) acGCTCCAGGCAACGGCGGGTCGCATACAACCGCGCAAATCCCCTCAATCCCGGAGCTACACCAACGCCGGCAAAAGCGCGGATGCGGGCCCGCA‑CGGGGAAATTTAACACCCGTGCTTTTGCTTCGCTCATCATCATTACCGCAGCTgc > 2:636905/1‑150 (MQ=255) cTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCGCATCAATGCCAGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGcc < 2:1215359/150‑1 (MQ=255) cAGGCAACGGCGGGTCGCATACACCCGCGCAATTTCCCTCAATGCCGGATCTACACCAACGCTGGCAAAAGCGCGAATGCGGGCCCGCA‑CGGGGAAATTCAACGCCCGTGCTTTTGCTTCGCTCATCATCATTACCGCCGCTGCGCCCTc > 2:114505/1‑150 (MQ=255) aGGCAACGGCGGGGCGCATACACCCGCGCAAATCCCATCAATGCCGGATCTACACCCACGCCGGCAAAAGCGCGAATGCGGGCCAGCC‑CGGGGAAATTCAAACCCCGTGCTTTTGCTTCGCTCCTCATCATTACCCCCGCTGCGcccccg > 2:1218615/1‑146 (MQ=255) aCGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTAt < 1:157841/150‑1 (MQ=255) ggcggGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATgg < 2:20297/150‑1 (MQ=255) gcggGTCGCATACTCCGGCGCAATTCCCAGCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGga < 2:65177/150‑1 (MQ=255) gggTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGgatg < 1:754488/150‑1 (MQ=255) gTCGCATTCACCGGCGCGATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGgatgat < 2:614357/150‑1 (MQ=255) gCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGGATGATGCa > 1:3151/1‑150 (MQ=255) cATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGGATGATGCAt < 2:710003/150‑1 (MQ=255) aTACACCGGCGCAATTCCCCTCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGGATGATGCAtt < 2:796469/150‑1 (MQ=255) aTACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGGATGATGCAt > 1:151432/1‑149 (MQ=255) tACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGGATGATGCATTa > 1:574215/1‑150 (MQ=255) ccGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCAt > 2:1017494/1‑126 (MQ=255) ccGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGGATGATGCATTACCCg < 1:543749/150‑1 (MQ=255) cGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATc < 1:1017494/126‑1 (MQ=255) cGGAGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGGATGATGCATTACCCg < 2:288746/149‑1 (MQ=255) ggCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGGATGATGCATTACCCGCt < 2:848260/150‑1 (MQ=255) cgcAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGGATGATGCATTACCCGCTGt < 1:52292/150‑1 (MQ=255) aaTTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGGATGATGCATTACCCGCTGTca > 2:1102739/1‑149 (MQ=255) cccATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGGATGATGCATTACCCGCTGTCACAGaa > 2:687311/1‑150 (MQ=255) cccATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGGATGATGCATTACCCGCTGTCACAGa < 1:1206072/149‑1 (MQ=255) aTCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGGATGATGCATTACCCGCTGTCACAGAAcc > 2:549482/1‑149 (MQ=255) aTCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGGATGATGCATTACCCGCTGTCACAGAAcc > 1:968123/1‑149 (MQ=255) | GACCCGACGCTCATCCCACTCAAGCATCTTGCCAACCGAAAGCGCCTGTGCAGCAAACGCTTCATTAGCCTCGATAAGATCGACTTCAGCCAACTGCCAGCCTACACGCTCCAGGCAACGGCGGGTCGCATACACCGGCGCAATTCCCATCAATGCCGGATCTACACCAACGCTGGCAAATGCGCGAATGCGGGCCAGCA‑CGGGTAAATTCAACGCTCGTGCTTTGGCTTCGCTCATCATCATTACCGCAGCTGCGCCATCGTTTATGGATGATGCATTACCCGCTGTCACAGAACC > CP009273/2977941‑2978237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |