| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 360104 = | 52 (0.900) | 54 (0.940) | 49/276 | NT | 50.9% | intergenic (‑38/+557) | lacZ/lacI | pseudogene, truncated/DNA‑binding transcriptional repressor |
| ? | CP009273 | = 360286 | NA (NA) | intergenic (‑220/+375) | lacZ/lacI | pseudogene, truncated/DNA‑binding transcriptional repressor | |||||
Only 100 of 120 total aligned reads displayed.
GGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACT > CP009273/359957‑360253 | accctccgagccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattaat > 1:916969‑M1/148‑150 (MQ=255) gTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAAtt > 1:264687/1‑150 (MQ=255) ccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattaatt > 1:720895‑M1/147‑150 (MQ=255) tAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTc > 1:863516/1‑150 (MQ=255) cctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTc > 1:904623‑M1/146‑150 (MQ=255) ggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCa > 1:986404‑M1/140‑150 (MQ=255) gCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGt < 2:887213/150‑1 (MQ=255) cgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTgg < 2:97075‑M1/9‑1 (MQ=255) cgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTgg > 1:97075‑M1/137‑145 (MQ=255) ttCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTAt < 1:572718/150‑1 (MQ=255) ttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATggc < 1:556551‑M1/20‑1 (MQ=255) ttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATggc < 1:934028‑M1/20‑1 (MQ=255) tcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcgg < 2:141920/150‑1 (MQ=255) cgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATggcg > 1:665759‑M1/129‑149 (MQ=255) cgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATggcg > 1:936894‑M1/129‑149 (MQ=255) gcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATggcggg > 2:628686‑M1/128‑150 (MQ=255) gcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATggcgg > 2:138599‑M1/128‑149 (MQ=255) caacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATggcggg‑c < 1:512486‑M1/24‑1 (MQ=255) tGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CCTc > 2:689656/1‑150 (MQ=255) gttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTcc > 2:662364‑M1/123‑150 (MQ=255) tttACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCt < 1:167756/150‑1 (MQ=255) tttACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGGCCt > 2:856147/1‑150 (MQ=255) ttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCt > 2:112968‑M1/122‑150 (MQ=255) ccTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑GGTGCttgcc > 2:802050/1‑146 (MQ=255) ccTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGccc > 2:459376/1‑150 (MQ=255) ccTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGccc > 2:981376/1‑150 (MQ=255) aatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCTTGGCAGTTTATGGCGGG‑CGTCCTGccc < 1:452127‑M1/33‑1 (MQ=255) cTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGtt > 1:276845/1‑130 (MQ=255) ttGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGttt < 2:276845/130‑1 (MQ=255) tgtgGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGcc > 1:126983/1‑150 (MQ=255) ggAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCCGCCCGCCAcc > 1:141533/1‑150 (MQ=255) gAGCGACATCCAGGGGCCCTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGCTGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCAcc < 2:264687/149‑1 (MQ=255) gAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCAccc < 2:81965/150‑1 (MQ=255) cggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTcc > 1:608591‑M1/108‑150 (MQ=255) atttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCg > 1:864272‑M1/102‑150 (MQ=255) tttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGt > 2:111959‑M1/101‑150 (MQ=255) ggCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAGTTCCTGGCAGTTTATGGCGGG‑CATCCTGCCCGCCACCCTCCGGGCCGTTGCt < 2:863516/150‑1 (MQ=255) aggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACg > 1:169555‑M1/89‑150 (MQ=255) ccGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGt < 2:290759/150‑1 (MQ=255) ccGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGGCCTGCCCGCCCCCCCCCCGGCCCTTTCTTCG‑CAAcct > 2:426135/1‑148 (MQ=38) gagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCa > 1:689177‑M1/85‑150 (MQ=255) tcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑GGTCCCGCCCCCCCCCCCCCCGGCCGGTGCTTCT‑CAAAGTTCAAAtccc < 2:187899‑M1/72‑2 (MQ=255) aGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCg < 1:656195/150‑1 (MQ=255) aGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCCCCCCCCCCCGGGCCGTTGCTTCG‑CCACGTTCAAATca > 1:826266/1‑148 (MQ=255) aGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGC‑GGGCCCGCCCGCCCCCCCCCCCGGCGCTTCTTCG‑CAACGCTCAAAACCg > 2:670652/1‑150 (MQ=255) caccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCg > 2:512486‑M1/78‑149 (MQ=255) ggCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTc < 1:602273/150‑1 (MQ=255) caaacatcagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCcgg > 2:687465‑M1/72‑150 (MQ=255) ccATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCcggc < 2:141533/149‑1 (MQ=255) aacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCcggc‑g > 2:650936‑M1/70‑150 (MQ=255) cATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCcggc‑gg < 2:859350/150‑1 (MQ=255) aTCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGa < 1:802050/150‑1 (MQ=255) aacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCAccc > 1:176429‑M1/67‑106 (MQ=255) aacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGAt > 1:324786‑M1/67‑150 (MQ=255) acagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGAtt > 2:870323‑M1/66‑150 (MQ=255) cagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGAttt > 2:765315‑M1/65‑150 (MQ=255) aGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTg < 1:400947/150‑1 (MQ=255) gataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCt < 1:849607‑M1/7‑1 (MQ=255) ataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGtt > 1:301423‑M1/62‑75 (MQ=255) caccaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTa < 1:428166/150‑1 (MQ=255) caccaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTCCCAGCCACCCCCCCGGGCGGTTCTTCG‑CAAAGTTCAAAACCGCTCCCGGC‑GGGGTTGTTCtt > 1:670058/1‑149 (MQ=25) ccaTCCAGTGCGGGACCTCCGATGATACGCTGTCAGACATGAGAATTCCAATCCCCAATTCCTGGCGGTTTATGACGGG‑CGGCCTGCCCGCCACCCTCCGGACCGTTGCTTCG‑CAACGTTCAGATCCGCTCCCAGC‑GGATTTGTCCTACt < 2:809301/150‑1 (MQ=18) tCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAg < 1:981376/150‑1 (MQ=255) ccAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCCGCCCCCCCCCCCCCCGGCCCGTGCCTTG‑CAAAGTTCAAATCCGCTCCCGGC‑GGGTGTGTCCTACTctg > 2:864272/1‑147 (MQ=21) gTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGGCCTGCCCCCCACCCCCCCCGCCGTTGCTTTGCCAACTTTCAAA‑CCCCCCCCCGC‑GGGTTTGTCCTCCTCacgg > 2:177472/1‑145 (MQ=255) cccagtctttcgactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGGCCTGCCCGCCCCCCCCCCGGGCGGTGCTTCG‑CAAAGTTGAAAATCGCTCCCCGC‑GGATTTGTTCTAATCAGGggag < 2:956617‑M1/102‑1 (MQ=255) cAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCg < 2:7081/150‑1 (MQ=255) ggAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCCCCCCCCCGGCCGGTGCTTCG‑CAACCTTCAAAACCGCCCCCCGC‑GGGTTTTTCCTTCTCCGGAGAGCggt > 1:292077/1‑148 (MQ=21) gCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCCGCCCGCCACCCCCCCGGCCGCCGCTTCG‑CAAAGTTCAAATCCCCCCCCCGCGGGGTTTTTCCT‑CTCCGGAGAGCGtttcc > 1:870323/1‑147 (MQ=18) cTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCAcc < 1:426135/150‑1 (MQ=255) gactgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGGCCTGCCCCCCCCCCTCCCGGCCGTTGCTTCG‑CAACATTCAAATCCCCTCCCCGC‑GGGTTTTTCCTACTCAGGAGAgagttccccca < 1:925558‑M1/112‑6 (MQ=255) cGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCCGCCCCCCACCCCCCGGGCCGGTGCTTCG‑CAACGTTTCAATCCCCCCCCCGC‑GGGTTTTTTCTACTCAGGAGAGCGTTTAccca > 1:628686/1‑147 (MQ=18) gatgatAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCCGCCCGGCCCCCCCCCCCCCGCG‑CGTTTCTTCT‑CCACCTTTACATCCCCCCCCCGC‑CGGCTTGTTCTTCTCCGGGGAGGGGTCaaccgc > 2:324786/1‑144 (MQ=255) actgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGaca > 2:934028‑M1/37‑150 (MQ=255) ctgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATggc > 2:566770‑M1/36‑55 (MQ=255) ctgagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATggc < 1:566770‑M1/20‑1 (MQ=255) tgatAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCCGCCCCCCACCCCCCCGGCCGGTGCTTTG‑CCAAGTTCAAAAACGCCCCCGGC‑GGGGTTTTCCTACTCCGGAGAGAGGTCACCCacaa > 2:471044/1‑149 (MQ=18) ctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATggcggg > 1:178967‑M1/30‑52 (MQ=255) ctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATggcggg < 2:178967‑M1/23‑1 (MQ=255) aGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAaacaac < 2:785151/149‑1 (MQ=255) tttatttgatgcctggggaattAATTCCTGGCAGTTTATGGTGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATaaaa < 2:405342‑M1/128‑1 (MQ=255) ttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATaaaa > 1:689656‑M1/22‑149 (MQ=255) atttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACg > 1:187899‑M1/20‑149 (MQ=255) aTGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGaa < 1:177472/150‑1 (MQ=255) tGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGaaa < 1:835220/150‑1 (MQ=255) tgatgcctggggaattAATTCCTGGCAGTTTATGGCGGG‑GGGCCTTCCCCCCACCCCCCCGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGGTTTGTCCTACTCAGGAGAGCGTTCACCGACAAAAAACAAATAAAACGaa < 1:778234‑M1/132‑1 (MQ=255) gatgcctggggaattAATTCTTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAg > 2:452127‑M1/16‑149 (MQ=255) aaTTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCCCCCCCCCCCCGGCCCCTGCTTCT‑CCACCCTCCAATCCCCCCCCCGC‑GGGTTTTTCCCTCTCACGAGAGCGTTCACCCCCCAACaaaagaaaaaaagaaaaacc > 2:442867/1‑146 (MQ=9) ctggggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAg > 2:319768‑M1/11‑150 (MQ=255) ccGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAg < 1:735813/149‑1 (MQ=40) gggaattAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCt > 1:136869‑M1/8‑150 (MQ=255) gATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCt < 1:877977/150‑1 (MQ=38) ggaattaaTTCCTGGCAGTTTATGGCGGG‑CGTCCTTCCCGCCCCCCCCCCTGCCCGTGTTTTT‑CAACCATTAAATCCGCCCCCCGC‑GGGGTTGTTCTCCTTATGAGAGCGTTTCCCCCCAAACAACAGAAAAAAAAAAAAGACCAATCtt > 2:593756/7‑150 (MQ=2) tCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCttt < 1:459376/150‑1 (MQ=37) ccccAATTCCTGGCAGTTTATGGCGGG‑CGTCCCGCCCGCCCCCCCCCGGGCCGGTGCTTCG‑CAAAGTTCAAATCCGCTCCCCGC‑GGGTTTGTTCTACTCAGGAGAGGGGTTACCCACAAAAAAAAAAAAAAAAGAAAAGGCCAGTCCTTc > 1:138599/1‑150 (MQ=2) aattaaTTCCTGGCAGTTTATGGCGGG‑CGCCCTTCCCCCCACCCTCCCGGGCCTTTCCTCG‑CAACGCTCCAATCCCCTCCCCGC‑GCATTTTTCCTCCTCCCGAGAGCGTTCCCCCACAAACCACTGTTTAAACGAAAAGCCCAGCCTTTc > 1:565461/5‑150 (MQ=2) cccAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTc < 2:428065/149‑1 (MQ=35) attAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCCCCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCg > 1:931196‑M1/4‑150 (MQ=255) aaTTCCTGGCAGTTTATGGCGGG‑TGCCCCGCCCCCCACCCCCCCGGGCGGTGTTTCT‑CAAAGTTTAAAACCGCTCCCCGC‑GGATTTATCCTTCTCTCGAGGGAGTGGACAGACAAAAAACAGATAAAAAGATAGGCTCAGTCatttgcgt > 2:69124/1‑145 (MQ=2) aaTTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACt < 2:292576/150‑1 (MQ=32) | GGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGG‑CGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCG‑CAACGTTCAAATCCGCTCCCGGC‑GGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACT > CP009273/359957‑360253 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |