Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC CP009273 2,770,391 IS2 (+) +5 bp 64.9% coding (156‑160/201 nt) ypjJ → uncharacterized protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 2770391 =23 (0.390)39 (0.630) 37/276 NT 62.0% coding (156/201 nt) ypjJ uncharacterized protein
?CP009273 2989720 = NA (NA)noncoding (1331/1331 nt) IS2 repeat region
* ? CP009273 = 277039523 (0.390)46 (0.740) 43/276 NT 65.8% coding (160/201 nt) ypjJ uncharacterized protein
?CP009273 = 2991050 NA (NA)noncoding (1/1331 nt) IS2 repeat region

Only 100 of 116 total aligned reads displayed.

CAGACGTGCTCCCAGGCGCGGCGTGATATCTCGCTGCAGGCCCCATGTGGTGTTGCTCATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2770533‑2770391
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGC  >  CP009273/2989720‑2989868
                                                                                                                                                                                                                                                                                                    
CAGACGTGCTCCCAGGCGCGGCGTGATATCTCGCTGCAGGCCCCATGTGGTGTTGCTCATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTT                                                                                                                                                <  1:215726/150‑1
 AGACGTGCTCCCAGGCGCGGCGTGATATCTCGCTGCAGGCCCCATGTGGTGTTGCTCATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTG                                                                                                                                               <  1:97053/150‑1
               GCGCGGCGTGATATCTCGCTGCAGGCCCCATGTGGTGTTGCTCATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCA                                                                                                                                 <  2:626510/150‑1
                    GCGTGATATCTCGCTGCAGGCCCCATGTGGTGTTGCTCATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACAT                                                                                                                            >  1:956862/1‑150
                     CGTGATATCTCGCTGCAGGCCCCATGTGGTGTTGCTCATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATC                                                                                                                           <  2:191948/150‑1
                       TGATATCTCGCTGCAGGCCCCATGTGGTGTTGCTCATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTG                                                                                                                         >  1:735393/1‑150
                                GCTGCAGGCCCCATGTGGTGTTGCTCATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACT                                                                                                                 >  1:109414/1‑149
                                GCTGCAGGCCCCATGTGGTGTTGCTCATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCAC                                                                                                                  <  2:40923/148‑1
                                GCTGCAGGCCCCATGTGGTGTTGCTCATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATC                                                                                                                    <  2:963938/146‑1
                                     AGGCCCCATGTGGTGTTGCTCATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCC                                                                                                           <  2:615623/150‑1
                                          CCATGTGGTGTTGCTCATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTAC                                                                                                      <  2:456826/150‑1
                                                 GTGTTGCTCATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCG                                                                                               >  2:617919/1‑150
                                                 GTGTTGCTCATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCC                                                                                                <  1:753503/149‑1
                                                    TTGCTCATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTG                                                                                            <  1:1039860/150‑1
                                                          ATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCG                                                                                         >  2:940387/1‑147
                                                                AACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTC                                                                                >  1:370593/1‑150
                                                                AACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTC                                                                                >  1:778443/1‑150
                                                                     CTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTG                                                                           >  1:631879/1‑150
                                                                      TTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGT                                                                            <  2:897428/148‑1
                                                                       TTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGC                                                                         >  1:111335/1‑150
                                                                        TATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGC                                                                         >  2:844004/1‑149
                                                                           TGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGC                                                                     >  1:34679/1‑150
                                                                           TGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGCGGCGAGC                                                                     >  1:427460/1‑150
                                                                              CAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGA                                                                   >  2:122624/1‑149
                                                                                          ATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCAC                                                      <  2:986470/150‑1
                                                                                           TACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCAC                                                      >  1:832334/1‑149
                                                                                                 TCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGG                                               <  2:109414/150‑1
                                                                                                    GTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATG                                            >  1:494418/1‑150
                                                                                                    GTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATG                                            <  1:627361/150‑1
                                                                                                                  CCGCTGCGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAAT                              >  1:215051/1‑150
                                                                                                                        CGGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGA                        <  1:940387/150‑1
                                                                                                                         GGTCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAA                       >  1:663638/1‑150
                                                                                                                           TCCTGCGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACG                     <  2:832334/150‑1
                                                                                                                                CGGCGTTCGGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTC                 <  1:617919/149‑1
                                                                                                                                       tagtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGT         <  2:898206/143‑1
                                                                                                                                       tagtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGT         >  2:8670/8‑150
                                                                                                                                       tagtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGT         <  2:148191/143‑1
                                                                                                                                       tagtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGT         >  1:510179/8‑150
                                                                                                                                       tagtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGT         <  2:653643/143‑1
                                                                                                                                       tagtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGT         >  2:106558/8‑150
                                                                                                                                       tagtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGT         <  2:765252/143‑1
                                                                                                                                        agtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTT        >  2:937100/7‑150
                                                                                                                                        agtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTT        >  1:77538/7‑150
                                                                                                                                        GGCGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTT        >  2:302790/1‑150
                                                                                                                                         gtgctCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTC       >  1:71839/6‑150
                                                                                                                                         gtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTC       >  2:158328/6‑150
                                                                                                                                         gtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTC       >  2:654110/6‑150
                                                                                                                                         gtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTC       >  2:1022628/6‑150
                                                                                                                                         gtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTC       <  1:196391/145‑1
                                                                                                                                         gtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTC       >  1:183799/6‑150
                                                                                                                                         gtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTT        <  2:393749/144‑1
                                                                                                                                         gtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTT        <  2:427931/144‑1
                                                                                                                                         gtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTT        <  1:852873/144‑1
                                                                                                                                         gtgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTT        <  2:475610/144‑1
                                                                                                                                          tgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCT      >  2:255132/5‑150
                                                                                                                                          tgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCT      <  1:253911/146‑1
                                                                                                                                          tgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCT      >  2:83517/5‑150
                                                                                                                                          tgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCT      <  2:309335/146‑1
                                                                                                                                          tgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCT      <  1:155402/146‑1
                                                                                                                                          tgatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCT      <  1:976242/146‑1
                                                                                                                                          CGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCT      >  2:80520/1‑150
                                                                                                                                           gatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTT     >  1:98358/4‑150
                                                                                                                                           gatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTT     >  2:592474/4‑150
                                                                                                                                           gatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTT     >  1:501616/4‑150
                                                                                                                                           gatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTT     >  1:468649/4‑150
                                                                                                                                           gatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTT     >  1:57145/4‑150
                                                                                                                                           gatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTT     >  2:790095/4‑150
                                                                                                                                           gatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTT     >  1:461014/4‑150
                                                                                                                                           gatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTT     >  2:40937/4‑150
                                                                                                                                           gatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTT     >  2:920825/4‑150
                                                                                                                                           gatCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTT     >  1:745948/4‑150
                                                                                                                                            atCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTT    >  2:386843/3‑150
                                                                                                                                            atCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTT    >  1:540598/3‑150
                                                                                                                                            atCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTT    >  1:847773/3‑150
                                                                                                                                            atCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTT    >  1:978400/3‑150
                                                                                                                                            atCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTT     <  1:251524/147‑1
                                                                                                                                            atCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTT     <  1:24280/147‑1
                                                                                                                                            atCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTT     <  2:374050/147‑1
                                                                                                                                            atCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTT     <  2:296822/147‑1
                                                                                                                                            atCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTT     <  2:588210/147‑1
                                                                                                                                             tCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTG   >  1:148975/2‑150
                                                                                                                                             tCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTG   >  2:783311/2‑150
                                                                                                                                             tCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTG   >  1:1061313/2‑150
                                                                                                                                             tCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTG   >  1:899964/2‑150
                                                                                                                                             tCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTG   >  2:636116/2‑150
                                                                                                                                             tCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTG   >  2:457933/2‑150
                                                                                                                                             tCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTG   >  1:620305/2‑150
                                                                                                                                              CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGC  >  2:425505/1‑150
                                                                                                                                              CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGC  >  1:968618/1‑150
                                                                                                                                              CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGC  >  1:890236/1‑150
                                                                                                                                              CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGC  >  2:223856/1‑150
                                                                                                                                              CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGC  >  2:281045/1‑150
                                                                                                                                              CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGC  >  1:644865/1‑150
                                                                                                                                              CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGC  >  2:382284/1‑150
                                                                                                                                              CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGC  <  2:65112/150‑1
                                                                                                                                              CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGC  <  1:311779/150‑1
                                                                                                                                              CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGC  >  2:48211/1‑150
                                                                                                                                              CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGC  >  2:642650/1‑150
                                                                                                                                              CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGC  >  1:434837/1‑150
                                                                                                                                              CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGC                    >  1:380143/1‑132
                                                                                                                                                                                                                                                                                                    
CAGACGTGCTCCCAGGCGCGGCGTGATATCTCGCTGCAGGCCCCATGTGGTGTTGCTCATTCATAACCTCTTTATTGTCAGTTCAGGGTGATACTCATCAGTCAAGCATACGGTCCGCTGCGGTCCTGCGGCGTTCGGCGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2770533‑2770391
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGC  >  CP009273/2989720‑2989868

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.