| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 360180 = | 45 (0.730) | 31 (0.910) +CCCTAGACCTAGGGCGTTCGGCTGCGGCGAGCGGTATCAGCTCACTCAAAGGCGGTAATACG |
27/152 | NT | 71.4% | intergenic (‑114/+481) | lacZ/lacI | pseudogene, truncated/DNA‑binding transcriptional repressor |
| ? | CP009273 | 1308956 = | 0 (0.000) | intergenic (+41/+19) | ompW/yciE | outer membrane protein W/putative rubrerythrin/ferritin‑like metal‑binding protein | |||||
GGATATCGATACCACCGCCAATTATAAGCTGGGCGGTGCACAGCAACACGATAGCGTACGCCTCGATCCGTGGGTGTTTATGTTCTCAGCAGGATATCGTTTTTAATTCCGCACAAAAACGACCCCGTAATATACGGGGTCAATAAGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTGCTTTTCCTCATTTAAAATCGCTTCGATGGTTGGAATT > CP009273/1308810‑1309104 | cgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGAc < 1:300381‑M2/4‑1 (MQ=255) aaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACAt > 2:867589‑M2/145‑150 (MQ=255) aaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACAt < 1:67505‑M2/6‑1 (MQ=255) aggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATgg < 2:117343‑M2/8‑1 (MQ=255) gctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGta < 2:87247‑M2/10‑1 (MQ=255) ctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGta > 2:546305‑M2/140‑149 (MQ=255) agtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGtata < 2:167738‑M2/12‑1 (MQ=255) gtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAg < 1:367027‑M2/15‑1 (MQ=255) cgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAggg > 1:442860‑M2/134‑150 (MQ=255) aaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGta < 1:1018742‑M2/19‑1 (MQ=255) aagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGtat > 2:1053925‑M2/131‑150 (MQ=255) agactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGtatt < 2:666670‑M2/21‑1 (MQ=255) ctaggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTattatt > 2:741167‑M2/127‑150 (MQ=255) ggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTAttt < 1:305801‑M2/25‑1 (MQ=255) cgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCtt < 1:505394‑M2/33‑1 (MQ=255) cgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCtt < 1:1053925‑M2/33‑1 (MQ=255) cgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTc > 2:421897‑M2/117‑150 (MQ=255) ttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTAc < 2:562546‑M2/37‑1 (MQ=255) tatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGc > 1:1019171‑M2/112‑150 (MQ=255) ttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCa < 1:534460‑M2/44‑1 (MQ=255) ttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCa < 1:996265‑M2/44‑1 (MQ=255) ttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGAACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCa < 2:276626‑M2/41‑1 (MQ=255) tttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGttt < 1:965562‑M2/48‑1 (MQ=255) tttgtcggtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGtt < 1:675990‑M2/47‑1 (MQ=255) gtgaacgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCg < 1:1001021‑M2/55‑1 (MQ=255) cgctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtacttctTGACATGGTATAAAGGTTCTTCTTTCTTTCCTTTTACGCCATCAGTTTCAGAGCGAATTa < 1:1028386‑M2/60‑1 (MQ=255) gctctcctgagtaggacaaatccgccgccctagacctagggcgttcggctgcgtctagcggtatcatctcactcaaaggcggtaatacgGGACATGGTATATATGGTATTATTTCTTCTCTTCTACGCCATCATTTTCATAGCGAATTa > 1:911900‑M2/90‑149 (MQ=255) ctgagtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAAtt < 1:977343‑M2/66‑1 (MQ=255) agtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTtct < 1:295817‑M2/69‑1 (MQ=255) agtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTtct > 2:101035‑M2/81‑149 (MQ=255) agtaggacaaatccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTtct < 1:927183‑M2/69‑1 (MQ=255) atccgccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGc < 2:1019171‑M2/80‑1 (MQ=255) gccgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGaa < 2:671397‑M2/84‑1 (MQ=255) cgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAata < 1:697412‑M2/86‑1 (MQ=255) cgccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAata < 2:1059298‑M2/86‑1 (MQ=255) gccctagacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAatat > 2:1060891‑M2/64‑150 (MQ=255) agacctagggcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTg > 1:1028168‑M2/59‑149 (MQ=255) gttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTc < 2:403282‑M2/103‑1 (MQ=255) gctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCa > 1:577973‑M2/43‑150 (MQ=255) ctgcggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCAt < 2:948611‑M2/109‑1 (MQ=255) cggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCAttt < 1:665838‑M2/111‑1 (MQ=255) cggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTg < 1:867589‑M2/112‑1 (MQ=255) ggcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTGc < 2:967505‑M2/113‑1 (MQ=255) gcgagcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTGCt > 2:94485‑M2/37‑150 (MQ=255) agcggtatcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCAAGTCGGCCATTTGCtttt > 1:172208‑M2/34‑150 (MQ=255) atcagctcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTGCTTTTCCTCAt > 1:435148‑M2/28‑150 (MQ=255) tcactcaaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTGCTTTTCCTCATTTaaaa > 2:289430‑M2/22‑150 (MQ=255) caaaggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTGCTTTTCCTCATTTAAAATCGCt > 1:1022678‑M2/17‑150 (MQ=255) aaggcggtactacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTGCTTTTCCTCATTTAAAATCGCTTc > 2:544578‑M2/15‑150 (MQ=255) ggcggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTGCTTTTCCTCATTTAAAATCGCTTCGa > 1:277742‑M2/13‑150 (MQ=255) ggtaatacgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTGCTTTTCCTCATTTAAAATCGCTTCGATgg > 1:931197‑M2/10‑150 (MQ=255) acgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTGCTTTTCCTCATTTAAAATCGCTTCGATGGTTGGaa > 1:751443‑M2/4‑150 (MQ=255) cgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTGCTTTTCCTCATTTAAAATCGCTTCGATGGTTGGAAt > 1:339148‑M2/3‑150 (MQ=255) cgGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTGCTTTTCCTCATTTAAAATCGCTTCGATGGTTGGAAt > 2:162490‑M2/3‑150 (MQ=255) gGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTGCTTTTCCTCATTTAAAATCGCTTCGATGGTTGGAAtt > 2:47761‑M2/2‑150 (MQ=255) ggACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTGCTTTTCCTCATTTAAAATCGCTTCGATGGTTGGAAtt > 2:511441/1‑149 (MQ=255) ggACATGGTATAAAGGGGATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTGCTTTTCCTCATTTAAAATCGCTTCGATGGTTGGAAtt > 2:511452/1‑149 (MQ=255) | GGATATCGATACCACCGCCAATTATAAGCTGGGCGGTGCACAGCAACACGATAGCGTACGCCTCGATCCGTGGGTGTTTATGTTCTCAGCAGGATATCGTTTTTAATTCCGCACAAAAACGACCCCGTAATATACGGGGTCAATAAGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCCATCAGTTTCAGAGCGAATTAAAAATTTCTCAGTTGTTTGCGGAATATTCTGAATCAGCCAGTCGGCCATTTGCTTTTCCTCATTTAAAATCGCTTCGATGGTTGGAATT > CP009273/1308810‑1309104 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |