| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 454244 = | 18 (0.280) | 51 (0.820) | 46/268 | NT | 74.5% | intergenic (+88/‑100) | clpX/lon | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La |
| ? | CP009273 | 603467 = | NA (NA) | intergenic (+23/‑54) | hokE/insL1 | toxic polypeptide, small/IS186 transposase | |||||
Only 100 of 143 total aligned reads displayed.
GTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCT > CP009273/454095‑454390 | tagagccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgg < 2:617979‑M1/2‑1 (MQ=255) agagccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggg > 1:84981‑M1/147‑149 (MQ=255) gagccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑a > 1:126022‑M1/146‑149 (MQ=255) aGCAAACCATTGCTGATTTATGGCAAGCCGGAAGCGCTACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑aaa < 2:1049927/150‑1 (MQ=255) gccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑aaa < 2:505099‑M1/6‑1 (MQ=255) ccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACa < 2:583856‑M1/8‑1 (MQ=255) aaaCCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACAT < 2:760275‑M1/150‑1 (MQ=255) aaaCCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACAT > 1:641861‑M1/1‑150 (MQ=255) ccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgtttaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATc > 1:348596‑M1/141‑150 (MQ=255) aaCCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATC > 1:1101381‑M1/1‑150 (MQ=255) cggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATcc > 1:505099‑M1/140‑150 (MQ=255) gcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATcccc > 1:132221‑M1/138‑150 (MQ=255) ttGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCata < 2:819683‑M1/150‑4 (MQ=255) ttGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCat > 2:937075‑M1/1‑147 (MQ=255) acgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCatat > 1:647392‑M1/133‑149 (MQ=255) ggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGG‑‑AAACATCCCCATATACTGACg < 1:237577‑M1/24‑1 (MQ=255) agtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTAc > 2:1087044‑M1/124‑150 (MQ=255) tatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACCGACGTACa > 2:260664‑M1/122‑150 (MQ=255) atccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATg < 1:561300‑M1/30‑1 (MQ=255) tccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATg > 2:220794‑M1/120‑149 (MQ=255) cagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGtt > 1:901636‑M1/118‑149 (MQ=255) ttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTaa < 1:390829‑M1/34‑1 (MQ=255) ttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATa > 1:394809‑M1/115‑150 (MQ=255) tcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATg < 1:608480‑M1/40‑1 (MQ=255) gtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGG‑‑AAACATCCCCATATACTGACGTACATGTTAATAGATgg > 2:237577‑M1/110‑150 (MQ=255) taccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTg < 1:761289‑M1/46‑1 (MQ=255) ggCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaag > 1:742574‑M1/1‑115 (MQ=255) ccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGaa > 2:233600‑M1/102‑149 (MQ=255) caacTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAg > 1:1000653/4‑149 (MQ=255) aatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGca < 1:366498‑M1/50‑1 (MQ=255) gTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcg < 1:703236‑M1/147‑41 (MQ=255) ccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgtgt > 1:849381‑M1/92‑150 (MQ=255) ataatTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgtgt > 1:590714/1‑150 (MQ=255) atTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCa < 1:573436/149‑1 (MQ=255) attgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCt > 2:699952‑M1/87‑150 (MQ=255) attgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGa < 2:855465‑M1/67‑1 (MQ=255) ctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGAt > 1:899127‑M1/83‑149 (MQ=255) cATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcg > 1:753118‑M1/1‑94 (MQ=255) tCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgtt > 2:283730‑M1/1‑91 (MQ=255) accagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTAc < 2:1039354‑M1/71‑1 (MQ=255) aTACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagac < 2:963117‑M1/150‑64 (MQ=255) aCAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacga > 1:313037‑M1/1‑85 (MQ=255) cAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgat < 1:850343‑M1/150‑67 (MQ=255) ggcatcgtcttaacgaggcaccgaggcgtctcattcttcagatggttcaacccttaagttagcgcttatGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGaaa < 2:1101362‑M1/81‑1 (MQ=255) aTTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgc > 2:958129‑M1/1‑82 (MQ=255) gtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGaa > 2:274245‑M1/70‑149 (MQ=255) atcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAAtt < 2:692014‑M1/83‑1 (MQ=255) gTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTa > 1:1023806/1‑149 (MQ=255) agagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTa < 1:568819‑M1/83‑1 (MQ=255) agagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTa < 2:187473‑M1/83‑1 (MQ=255) gtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAAc < 2:342646‑M1/86‑1 (MQ=255) ttcatcggcacgtttaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTaa < 1:292004‑M1/89‑1 (MQ=255) acaGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAaga > 2:181874/3‑148 (MQ=255) aaaGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttca < 2:949621‑M1/150‑82 (MQ=255) aaGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAaga > 1:300535/1‑147 (MQ=255) aGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcag < 2:665590‑M2/149‑87 (MQ=255) ggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAagagagag < 1:635423‑M1/97‑1 (MQ=255) ggggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgc < 2:858432‑M1/150‑87 (MQ=255) gcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAAAAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGct > 2:390829‑M1/53‑150 (MQ=255) accgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGctc < 2:457920‑M1/100‑1 (MQ=255) gttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTa < 2:80042‑M1/102‑1 (MQ=255) gttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTAt > 1:460522‑M1/49‑150 (MQ=255) ttttATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgtttt < 2:462507‑M1/150‑92 (MQ=255) ttttATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATg < 2:300535/150‑1 (MQ=255) cgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAAt > 1:692014‑M1/44‑150 (MQ=255) tctcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggccca > 1:937075‑M2/1‑50 (MQ=255) ctcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCt > 2:264201/1‑150 (MQ=255) catatcaggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCt < 1:711542‑M1/109‑1 (MQ=255) ccccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctg > 2:794989‑M1/1‑51 (MQ=255) cccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCt < 2:271401/147‑1 (MQ=255) ccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgccttggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtc < 2:259311‑M1/150‑102 (MQ=255) ccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGc < 2:641861/150‑1 (MQ=255) caggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCg < 2:222289‑M1/114‑1 (MQ=255) ggcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGtt < 2:474679‑M1/116‑1 (MQ=255) tAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcag < 1:689632‑M1/148‑104 (MQ=255) gcgtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTc < 2:517996‑M1/117‑1 (MQ=255) gtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCt < 2:168011‑M1/119‑1 (MQ=255) gtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCt < 1:321749‑M1/118‑1 (MQ=255) gtaataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCt < 2:101995‑M1/118‑1 (MQ=255) taataccacaacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTg < 1:389997‑M1/119‑1 (MQ=255) ccTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtc > 1:8183‑M1/1‑37 (MQ=255) caacccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCAtt < 1:95113‑M1/127‑1 (MQ=255) tATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtccc < 2:556861‑M1/148‑116 (MQ=255) ttCTCGGCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtccca < 1:958129‑M1/147‑117 (MQ=255) ccttaagttagcgcttatGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGaaa < 2:580087‑M1/132‑1 (MQ=255) ccttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAAt > 2:444710‑M1/19‑150 (MQ=255) ttaagttagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATcc < 1:1058130‑M1/134‑1 (MQ=255) ggCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggc < 2:742574‑M1/150‑125 (MQ=255) ggCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatg < 1:794989‑M1/148‑123 (MQ=255) gCGTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggc > 2:334436‑M1/1‑25 (MQ=255) gCGTTGAATGTGGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCg < 1:555513/150‑1 (MQ=255) cGTTGAATGTGGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGt < 1:209869/150‑1 (MQ=255) gTTGAATGTGGGGG‑AAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccac > 2:541498‑M1/1‑23 (MQ=255) tagcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTAt < 1:213215‑M1/140‑1 (MQ=255) gcgcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTAtt > 1:704322‑M1/9‑149 (MQ=255) gcttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGcc > 2:549896‑M1/7‑150 (MQ=255) cttatGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGcc > 1:457920‑M1/6‑150 (MQ=255) ttatGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGc < 1:721039‑M1/146‑1 (MQ=255) tgGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCt < 2:1000653/150‑1 (MQ=255) atGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCt > 1:187473‑M1/3‑149 (MQ=255) | GTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGG‑AAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCT > CP009273/454095‑454390 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |