New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | 1483968 = | NA (NA) | 48 (0.800) | 43/276 | NT | 98.0% | intergenic (+40/+2) | aldA/gapC | aldehyde dehydrogenase A, NAD‑linked/pseudogene, GAP dehydrogenase; glyceraldehyde‑3‑phosphate dehydrogenase (second fragment) |
? | CP009273 | 1858031 = | 1 (0.020) | intergenic (+8/‑76) | gapA/yeaD | glyceraldehyde‑3‑phosphate dehydrogenase A/D‑hexose‑6‑phosphate epimerase‑like protein |
GGCGAAGTTTGCACTTCCGTGTTCGATGCTAAAGCTGGTATCGCTCTGAACGACAACTTCGTGAAACTGGTATCCTGGTACGACAACGAAACCGGTTACTCCAACAAAGTTCTGGACCTGATCGCTCACATCTCCAAATAAGTTGAGATGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACTGGATG > CP009273/1857883‑1858179 | atttcggttcggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgt > 2:987099‑M2/149‑149 (MQ=255) cggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGa > 2:510054‑M2/140‑150 (MQ=255) tgtgatgccacgcagacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTaa < 2:456928‑M2/16‑1 (MQ=255) tgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTaaa < 1:659748‑M2/17‑1 (MQ=255) gatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTaaa > 1:309810‑M2/132‑148 (MQ=255) gatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTaaa > 1:448962‑M2/132‑148 (MQ=255) atgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTaaa > 2:841678‑M2/131‑147 (MQ=255) aacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaagtcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCg > 2:410789‑M2/121‑150 (MQ=255) ttaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGctct < 1:366752‑M2/38‑1 (MQ=255) accgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCttt > 2:307042‑M2/111‑150 (MQ=255) ctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCttttttt < 1:290364‑M2/44‑1 (MQ=255) tgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCttttttt > 1:7070‑M2/106‑149 (MQ=255) gggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTAcc > 1:450662‑M2/103‑150 (MQ=255) gcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCt > 1:959757‑M2/101‑149 (MQ=255) gatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGa > 1:834753‑M2/99‑149 (MQ=255) gatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGa > 2:501637‑M2/99‑149 (MQ=255) ctggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAg > 2:95097‑M2/90‑150 (MQ=255) tgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTa > 2:502691‑M2/86‑149 (MQ=255) aaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAg > 1:822094‑M2/84‑150 (MQ=255) aaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAgg < 1:95097‑M2/68‑1 (MQ=255) gtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGc > 2:324187‑M2/78‑150 (MQ=255) cgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGt > 1:706125‑M2/76‑150 (MQ=255) gcctggtacgataacgaatatggctccgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGt > 2:940239‑M2/75‑149 (MQ=255) ggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGa > 1:266525‑M2/71‑150 (MQ=255) tacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGAt > 2:924854‑M2/69‑149 (MQ=255) cgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTaa < 1:897829‑M2/84‑1 (MQ=255) cgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTa < 1:624849‑M2/83‑1 (MQ=255) taacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGaa < 1:510054‑M2/87‑1 (MQ=255) cgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAAt < 2:309810‑M2/90‑1 (MQ=255) atatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATATAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAAtttt > 2:550955‑M2/58‑150 (MQ=255) tatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAAttttt < 1:718736‑M2/94‑1 (MQ=255) gcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGccc > 1:825816‑M2/53‑150 (MQ=255) tcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTc > 2:690917‑M2/50‑150 (MQ=255) gtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTcc < 2:754262‑M2/102‑1 (MQ=255) gtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCg > 2:779744‑M2/48‑150 (MQ=255) tcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCgg < 2:706125‑M2/104‑1 (MQ=255) cagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATc < 2:450662‑M2/109‑1 (MQ=255) cagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATc < 1:987099‑M2/109‑1 (MQ=255) gACCTGATCGCTCACATCTCCAAATAAGTTGAGATGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACa < 2:886086/148‑1 (MQ=255) tcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAAt > 1:971191‑M2/34‑150 (MQ=255) cgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAAtc > 2:919416‑M2/33‑150 (MQ=255) accctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTcc > 2:156830‑M2/30‑150 (MQ=255) accctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTcc < 1:802800‑M2/121‑1 (MQ=255) ctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCGTGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCt < 1:324187‑M2/124‑1 (MQ=255) gaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTc < 2:448962‑M2/127‑1 (MQ=255) gaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTc < 2:773265‑M2/127‑1 (MQ=255) aaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCct < 1:472387‑M2/129‑1 (MQ=255) attcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCtctc > 1:60881‑M2/19‑150 (MQ=255) ctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCcgtc < 1:749892‑M2/137‑1 (MQ=255) aactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCcgtcg < 2:370946‑M2/138‑1 (MQ=255) acgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACTgg < 2:820751‑M2/146‑1 (MQ=255) acgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACTg < 1:831029‑M2/145‑1 (MQ=255) cgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACTGGAt > 1:278645‑M2/3‑150 (MQ=255) gTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACTGGATg < 2:959757‑M2/149‑1 (MQ=255) | GGCGAAGTTTGCACTTCCGTGTTCGATGCTAAAGCTGGTATCGCTCTGAACGACAACTTCGTGAAACTGGTATCCTGGTACGACAACGAAACCGGTTACTCCAACAAAGTTCTGGACCTGATCGCTCACATCTCCAAATAAGTTGAGATGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACTGGATG > CP009273/1857883‑1858179 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |