| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3179455 = | NA (NA) | 62 (1.030) | 55/276 | NT | 100% | intergenic (+7/‑91) | yqiG/insC1 | pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein/IS2 repressor TnpA |
| ? | CP009273 | = 3426721 | 0 (0.000) | coding (199/1125 nt) | smf | DNA recombination‑mediator A family protein | |||||
Only 100 of 152 total aligned reads displayed.
CCGACTCCCCACTACGGCAAGCTGAAATGAATGCAGCGCGTGCAGTTCTCCTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCATCAATATGCGACTGTTTTGCCACCCAGTGAGCGATACGGACCATATCATCGCCGT > CP009273/3426572‑3426870 | ccGACTCCCCACTACGGCAAGCTGAAATGAATGCAGCGCGTGCAGTTCTCCTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTccaa > 1:868315/1‑150 (MQ=255) aaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTccaacc < 1:333087‑M2/7‑1 (MQ=255) ccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTccaaccaa > 1:284407‑M2/142‑150 (MQ=255) cttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTccaaccaa > 2:904733‑M2/141‑149 (MQ=255) gcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACcaaca < 2:888911‑M2/11‑1 (MQ=255) cagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACaaa < 1:55019‑M2/13‑1 (MQ=255) cagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAg > 2:741406‑M2/137‑150 (MQ=255) gaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTg < 2:617247‑M2/16‑1 (MQ=255) gaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTg < 2:255261‑M2/16‑1 (MQ=255) ggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAg < 2:954428‑M2/18‑1 (MQ=255) aCGGCAAGCTGAAATGAATGCAGCGCGTGCAGTTCTCCTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccc < 1:569781‑M2/150‑14 (MQ=255) gcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGc > 2:469283‑M2/132‑150 (MQ=255) cGGCAAGCTGAAATGAATGCAGCGCGTGCAGTTCTCCTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccct > 1:856071‑M2/1‑136 (MQ=255) gttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCtt > 1:382901‑M2/130‑150 (MQ=255) gCAAGCTGAAATGAATGCAGCGCGTGCAGTTCTCCTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctga > 2:55940‑M2/1‑134 (MQ=255) cgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTc < 1:732996‑M2/23‑1 (MQ=255) cTGAAATGAATGCAGCGCGTGCAGTTCTCCTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctc < 2:217758‑M2/150‑22 (MQ=255) tGAAATGAATGCAGCGCGTGCAGTTCTCCTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctc < 1:684788‑M2/149‑22 (MQ=255) atgaatgCAGCGCGTGCAGTTCTCCTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagac > 2:68037‑M2/1‑124 (MQ=255) aatgCAGCGCGTGCAGTTCTCCTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaac > 2:784645‑M2/1‑121 (MQ=255) aatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTg > 1:902345‑M2/113‑149 (MQ=255) gcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAAt < 2:728277‑M2/42‑1 (MQ=255) cgTGCAGTTCTCCTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcac < 2:11172‑M2/150‑39 (MQ=255) catccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAAt > 1:598719‑M2/108‑149 (MQ=255) ttCTCCTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaat < 2:1035063‑M2/149‑45 (MQ=255) atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATgaaagaaa < 1:655025‑M2/50‑1 (MQ=255) tctcCTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaat < 2:38138‑M2/148‑45 (MQ=255) ctcCTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataa > 2:781036‑M2/1‑103 (MQ=255) tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGt > 1:232461‑M2/97‑150 (MQ=255) ccTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagt < 1:74793‑M2/149‑49 (MQ=255) cTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtga > 2:603144‑M2/1‑100 (MQ=255) cTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtga > 2:263461‑M2/1‑100 (MQ=255) cTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtg > 2:828902‑M2/1‑100 (MQ=255) aacaaacaGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatag > 2:311166‑M2/1‑96 (MQ=255) aacaaacaGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatag > 2:540787‑M2/1‑96 (MQ=255) ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGtgcct < 1:286350‑M2/61‑1 (MQ=255) gttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGtgcctg < 1:856283‑M2/62‑1 (MQ=255) ttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGtgcctgc > 2:858537‑M2/88‑150 (MQ=255) tcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCg < 2:528916‑M2/65‑1 (MQ=255) ccGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtt > 2:228216‑M2/1‑83 (MQ=255) gggTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt < 2:800683‑M2/149‑70 (MQ=255) gTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag > 1:463846‑M2/1‑78 (MQ=255) gTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt < 2:97216‑M2/147‑70 (MQ=255) aTCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac < 1:137425‑M2/149‑75 (MQ=255) atctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGttt < 2:363933‑M2/82‑1 (MQ=255) atctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTtg > 1:955092‑M2/68‑150 (MQ=255) cggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTtgctg < 2:284407‑M2/86‑1 (MQ=255) cggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCa < 1:387499‑M2/88‑1 (MQ=255) cgCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg < 2:169496‑M2/149‑84 (MQ=255) ccAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg < 2:248410‑M2/147‑84 (MQ=255) cagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATa < 1:637501‑M2/91‑1 (MQ=255) aGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacag > 2:684788‑M2/1‑59 (MQ=255) cttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCg > 1:580865‑M2/53‑149 (MQ=255) ttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCa > 1:40021‑M2/52‑150 (MQ=255) gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCAt < 2:164477‑M2/100‑1 (MQ=255) ggaggaTAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgatt > 2:471238‑M2/1‑53 (MQ=255) gggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCATCAatat > 2:390676‑M2/45‑150 (MQ=255) ttaagtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCATCAATATGCg < 1:469283‑M2/109‑1 (MQ=255) aaTTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctta > 1:9539‑M2/1‑44 (MQ=255) aaTTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtct < 1:310247‑M2/148‑105 (MQ=255) agtgataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCATCAATATGCGACt > 2:245605‑M2/39‑150 (MQ=255) aTTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttag < 2:528747‑M2/150‑108 (MQ=255) gataacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCATCAATATGCGACTGtt > 2:555124‑M2/36‑150 (MQ=255) gCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggcc > 2:1000402‑M2/1‑39 (MQ=255) aacagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCATCAATATGCGACTGTTTTg > 1:879570‑M2/33‑150 (MQ=255) acagatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCATCAATATGCGACTGTTTTg < 1:904733‑M2/118‑1 (MQ=255) agatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCATCAATATGCGACTGTTTTGCCa < 1:939957‑M2/121‑1 (MQ=255) gatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCATCAATATGCGACTGTTTTGCCAc > 1:310947‑M2/29‑150 (MQ=255) gatgtctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCATCAATATGCGACTGTTTTGCCAc > 2:918202‑M2/29‑150 (MQ=255) gCAGGAATTAAATGATGGATGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaa < 2:148827‑M2/150‑119 (MQ=255) aGGAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacg < 2:736867‑M2/150‑121 (MQ=255) aGGAATTAAATGATGGTTGGGGTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacg < 1:837512‑M2/150‑121 (MQ=255) tctggaaatataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCATCAATATGCGACTGTTTTGCCACCCa < 1:543363‑M2/125‑1 (MQ=255) gAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgca > 2:39081‑M2/1‑28 (MQ=255) gAATTAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacg < 2:863954‑M2/148‑121 (MQ=255) ttAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagac > 2:954571‑M2/1‑25 (MQ=255) tAAATGATGGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacg < 1:405336‑M2/150‑127 (MQ=255) atataggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCATCAATATGCGACTGTTTTGCCACCCAGTGAGCGa < 1:92930‑M2/133‑1 (MQ=255) atgatgGTTGGGTTGCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcg > 1:38138‑M2/1‑21 (MQ=255) aggggcaaatccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCATCAATATGCGACTGTTTTGCCACCCAGTGAGCGATACg > 2:547762‑M2/14‑150 (MQ=255) ggttgCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacag > 1:736867‑M2/1‑11 (MQ=255) ttgCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacagga > 2:925727‑M2/1‑9 (MQ=255) ttgCTCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacagga > 2:569781‑M2/1‑9 (MQ=255) tccaTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCATCAATATGCGACTGTTTTGCCACCCAGTGAGCGATACGGACCATatc < 1:782540‑M2/146‑1 (MQ=255) tCCAAtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaa < 1:227874‑M2/147‑143 (MQ=255) tCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCATCAATATGCGACTGTTTTGCCACCCAGTGAGCGATACGGACCATATCATCg > 2:352581/1‑150 (MQ=255) atagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcg > 1:619303‑M2/1‑1 (MQ=255) atagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcg > 2:152790‑M2/1‑1 (MQ=255) atagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcg > 1:177437‑M2/1‑1 (MQ=255) atagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcg < 1:184186‑M2/150‑150 (MQ=255) atagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcg < 1:355744‑M2/150‑150 (MQ=255) atagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcg < 1:591764‑M2/150‑150 (MQ=255) atagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcg < 1:519168‑M2/150‑150 (MQ=255) atagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcg < 1:389275‑M2/150‑150 (MQ=255) atagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcg < 1:492572‑M2/150‑150 (MQ=255) atagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatc > 2:826932‑M2/1‑1 (MQ=255) atagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatc > 1:232335‑M2/1‑1 (MQ=255) atagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatc > 1:837434‑M2/1‑1 (MQ=255) atagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatc > 2:336668‑M2/1‑1 (MQ=255) atagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatc > 1:676231‑M2/1‑1 (MQ=255) | CCGACTCCCCACTACGGCAAGCTGAAATGAATGCAGCGCGTGCAGTTCTCCTTCAACAAACAGTGCGCCGGGGTAATCTGTCGTCGCCAGAAGTTGAGGAGGATAAAATTCGCTGTCCGCAGGAATTAAATGATGGTTGGGTTGCTCCAACCAACAAAGTGAGCTTTCGATACTCTTTCGTGGAAATGAAAGAAAGCGTTGTGCCTGCCGCAATGTAAGCCCTGTTTGCTGCAATACAACCGCATCAATATGCGACTGTTTTGCCACCCAGTGAGCGATACGGACCATATCATCGCCGT > CP009273/3426572‑3426870 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |