| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3253679 = | 233 (1.530) | 3 (0.020) | 3/282 | 25.9 | 1.3% | coding (2099/2295 nt) | tdcE | pyruvate formate‑lyase 4/2‑ketobutyrate formate‑lyase |
| ? | CP009273 | 3390002 = | 221 (1.520) | coding (1153/1470 nt) | rng | ribonuclease G | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCCGTGGCCTCATTGACGTCGGTGGCGAAACTGCCGTTCACCTACGCCAAAGATGGGATCTCGTACACCTTCTCAATCGTTCCTGCGGCGCTGGGCAAAGAAGATCCAGTACGTAAAACCAACCTTGTCGGCCTGCTGGATGGGTATTTCCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3253833‑3253679‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccaccaGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAACCGT > CP009273/3390002‑3390150 GCCGTGGCCTCATTGACGTCGGTGGCGAAACTGCCGTTCACCTACGCCAAAGATGGGATCTCGTACACCTTCTCAATCGTTCCTGCGGCGCTGGGCAAAGAAGATCCAGTACGTAAAACCAACCTTGTCGGCCTGCTGGATGGGTATTTC > 1:75324/1‑150 CGTGGCCTCATTGACGTCGGTGGCGAAACTGCCGTTCACCTACGCCAAAGATGGGATCTCGTACACCTTCTCAATCGTTCCTGCGGCGCTGGGCAAAGAAGATCCAGTACGTAAAACCAACCTTGTCGGCCTGCTGGATGGGTATTTCCA > 2:977742/1‑150 CGTGGCCTCATTGACGTCGGTGGCGAAACTGCCGTTCACCTACGCCAAAGATGGGATCTCGTACACCTTCTCAATCGTTCCTGCGGCGCTGGGCAAAGAAGATCCAGTACGTAAAACCAACCTTGTCGGCCTGCTGGATGGGTATTTCCA < 1:172754/150‑1 GTGGCCTCATTGACGTCGGTGGCGAAACTGCCGTTCACCTACGCCAAAGATGGGATCTCGTACACCTTCTCAATCGTTCCTGCGGCGCTGGGCAAAGAAGATCCAGTACGTAAAACCAACCTTGTCGGCCTGCTGGATGGGTATTTCCAC > 1:1397854/1‑150 GTGGCCTCATTGACGTCGGTGGCGAAACTGCCGTTCACCTACGCCAAAGATGGGATCTCGTACACCTTCTCAATCGTTCCTGCGGCGCTGGGCAAAGAAGATCCAGTACGTAAAACCAACCTTGTCGGCCTGCTGGATGGGTATTTCCAC > 1:102390/1‑150 GTGGCCTCATTGACGTCGGTGGCGAAACTGCCGTTCACCTACGCCAAAGATGGGATCTCGTACACCTTCTCAATCGTTCCTGCGGCGCTGGGCAAAGAAGATCCAGTACGTAAAACCAACCTTGTCGGCCTGCTGGATGGGTATTTCCAC > 1:469665/1‑150 TGGCCTCATTGACGTCGGTGGCGAAACTGCCGTTCACCTACGCCAAAGATGGGATCTCGTACACCTTCTCAATCGTTCCTGCGGCGCTGGGCAAAGAAGATCCAGTACGTAAAACCAACCTTGTCGGCCTGCTGGATGGGTATTTCCACC < 1:1144735/150‑1 TGGCCTCATTGACGTCGGTGGCGAAACTGCCGTTCACCTACGCCAAAGATGGGATCTCGTACACCTTCTCAATCGTTCCTGCGGCGCTGGGCAAAGAAGATCCAGTACGTAAAACCAACCTTGTCGGCCTGCTGGATGGGTATTTCCAC > 2:1000876/1‑149 CACCTACGCCAAAGATGGGATCTCGTACACCTTCTCAATCGTTCCTGCGGCGCTGGGCAAAGAAGATCCAGTACGTAAAACCAACCTTGTCGGCCTGCTGGATGGGTATTTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTT > 1:1842144/1‑150 GTACACCTTCTCAATCGTTCCTGCGGCGCTGGGCAAAGAAGATCCAGTACGTAAAACCAACCTTGTCGGCCTGCTGGATGGGTATTTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGC < 2:1842144/148‑1 aaTTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTA < 1:157424/148‑1 CCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGC > 2:2173228/1‑149 CACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAA > 2:2093996/1‑150 CACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGC < 2:1626965/148‑1 CACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTAC < 2:755228/146‑1 ACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAAC > 1:1537732/1‑150 ACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAAC > 1:1073142/1‑150 CCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAACC > 2:1586058/1‑150 CCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAACC < 2:768671/150‑1 CCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAACC < 2:1298386/150‑1 CCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAACC < 1:1119815/150‑1 CAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAACCG < 2:2308245/150‑1 CAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAACCG > 2:638291/1‑150 CAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAACCG < 1:1888532/150‑1 AGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAACCGT < 1:372147/150‑1 AGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAACCGT < 1:1586058/150‑1 GCCGTGGCCTCATTGACGTCGGTGGCGAAACTGCCGTTCACCTACGCCAAAGATGGGATCTCGTACACCTTCTCAATCGTTCCTGCGGCGCTGGGCAAAGAAGATCCAGTACGTAAAACCAACCTTGTCGGCCTGCTGGATGGGTATTTCCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3253833‑3253679‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccaccaGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAACCGT > CP009273/3390002‑3390150 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |