| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 997364 | 3 (0.020) | 147 (0.970) | 114/294 | 0.1 | 98.0% | coding (102/1071 nt) | elfG | putative fimbrial‑like adhesin protein |
| ? | CP009273 | = 1463497 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
Only 100 of 280 total aligned reads displayed.
CTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGTTTCCTGTGATTGCGATAA > CP009273/997216‑997513 | gaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAgt > 2:847551‑M2/145‑150 (MQ=255) accttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAgtgt < 2:1235510‑M2/8‑1 (MQ=255) aCCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGta < 1:1229429‑M1/148‑3 (MQ=255) ccGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagac < 1:97430‑M1/150‑6 (MQ=255) aacaaATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccc < 1:908056‑M1/150‑12 (MQ=255) aacaaATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccc > 2:763818‑M1/1‑139 (MQ=255) cgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAg < 2:1397661‑M2/20‑1 (MQ=255) aTTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctg > 1:2781‑M1/1‑134 (MQ=255) ttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAggg > 2:2296903‑M2/129‑150 (MQ=255) ttAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaa < 1:1738733‑M1/150‑18 (MQ=255) aCTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatct > 2:2000518‑M1/1‑130 (MQ=255) ctctGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctc < 2:1612281‑M1/150‑22 (MQ=255) cattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATcc < 1:561298‑M2/28‑1 (MQ=255) tGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctcc < 1:395286‑M1/148‑23 (MQ=255) tGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctcc < 1:95544‑M1/148‑23 (MQ=255) attataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCg > 1:1349074‑M2/122‑150 (MQ=255) ttataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCg > 2:2159130‑M2/121‑149 (MQ=255) cGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccag < 2:194621‑M1/148‑25 (MQ=255) ataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGta < 2:1493204‑M2/31‑1 (MQ=255) cgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTg < 2:2396037‑M2/36‑1 (MQ=255) gcgAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaat < 2:172833‑M1/150‑34 (MQ=255) gAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatat > 2:1990093‑M1/1‑115 (MQ=255) gAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatat > 1:1812630‑M1/1‑115 (MQ=255) catccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCaa > 1:1269794‑M2/108‑150 (MQ=255) atccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAAt > 2:203987‑M2/107‑150 (MQ=255) tGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcactta > 1:470688‑M1/1‑108 (MQ=255) tGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcactta > 1:2126536‑M1/1‑108 (MQ=255) cgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAAtttt > 1:1573315‑M2/104‑150 (MQ=255) gcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTg > 2:65575‑M2/103‑150 (MQ=255) gCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaa > 1:621652‑M1/1‑107 (MQ=255) ccATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaa > 2:2389030‑M1/1‑106 (MQ=255) cATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaat > 2:1177406‑M1/1‑105 (MQ=255) gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGt < 1:216076‑M2/52‑1 (MQ=255) tGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagt < 1:1483064‑M1/149‑49 (MQ=255) cAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCTGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgat < 1:1733049‑M1/150‑52 (MQ=255) cAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgat < 2:1875333‑M1/150‑52 (MQ=255) cAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtga > 2:1585694‑M1/1‑99 (MQ=255) aTAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt > 1:1007516‑M1/1‑96 (MQ=255) aTAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt > 2:185299‑M1/1‑96 (MQ=255) aTAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt < 1:2000518‑M1/150‑55 (MQ=255) aTCTTTGGAGAAAAATGCGTGTCATTACTACGACTAATTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct > 1:1849257‑M1/1‑93 (MQ=255) tttGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaa > 1:1885084‑M1/1‑90 (MQ=255) tcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTggagg < 1:712963‑M2/66‑1 (MQ=255) cgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTggagg > 1:1019655‑M2/84‑149 (MQ=255) gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGgaa < 1:2329753‑M2/68‑1 (MQ=255) gagaAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatact < 2:214657‑M1/149‑64 (MQ=255) ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGgaag < 2:796989‑M2/69‑1 (MQ=255) agaAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactag < 1:2398855‑M1/150‑66 (MQ=255) cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGc > 2:1667489‑M2/77‑149 (MQ=255) acgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCaa < 1:1956153‑M2/75‑1 (MQ=255) ggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATa > 2:1314957‑M2/73‑150 (MQ=255) gaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATAc < 2:1452253‑M2/79‑1 (MQ=255) aatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACg < 2:113762‑M2/80‑1 (MQ=255) atatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACgg < 2:23248‑M2/81‑1 (MQ=255) aTTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtca < 1:984495‑M1/150‑81 (MQ=255) tactacGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatt > 2:438339‑M1/1‑68 (MQ=255) tactacGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatt > 2:216992‑M1/1‑68 (MQ=255) ggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTa < 1:1388521‑M2/89‑1 (MQ=255) ctacGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg > 2:1471417‑M1/1‑66 (MQ=255) cagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGt < 1:745152‑M2/91‑1 (MQ=255) gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTa > 1:1933423‑M2/56‑148 (MQ=255) aTTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaa > 2:281573‑M1/1‑58 (MQ=255) ttttttGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagat < 1:438339‑M1/150‑94 (MQ=255) ttttttGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagat > 1:2251534‑M1/1‑57 (MQ=255) ttttttGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacag < 1:559883‑M1/148‑92 (MQ=255) tttttGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagat > 2:60090‑M1/1‑56 (MQ=255) gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACa < 1:36‑M2/99‑1 (MQ=255) gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACa < 1:1326003‑M2/99‑1 (MQ=255) gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACa < 1:2020031‑M2/99‑1 (MQ=255) atgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAAtt < 2:2420807‑M2/103‑1 (MQ=255) ggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTAt > 1:1168317‑M2/44‑150 (MQ=255) gccgTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgt > 1:1047423‑M1/1‑48 (MQ=255) ttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCa < 1:1667489‑M2/109‑1 (MQ=255) cgTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtct > 1:36934‑M1/1‑46 (MQ=255) gTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctt < 2:1812630‑M1/150‑106 (MQ=255) gTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctt < 2:635758‑M1/150‑106 (MQ=255) tCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctta < 1:1585694‑M1/150‑107 (MQ=255) gtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTg > 1:182473‑M2/38‑149 (MQ=255) tgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGa < 2:950349‑M2/114‑1 (MQ=255) gataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGaa > 1:822533‑M2/36‑150 (MQ=255) taacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAAcg < 2:363731‑M2/117‑1 (MQ=255) acagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAAcgaa < 1:1713815‑M2/119‑1 (MQ=255) cagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAAcgaat > 1:2230989‑M2/31‑150 (MQ=255) tGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggaga > 1:65562‑M1/1‑33 (MQ=255) gatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAAcgaatc > 2:259176‑M2/29‑149 (MQ=255) ggTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaa > 1:2295219‑M1/1‑32 (MQ=255) ggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGat > 2:1061620‑M2/22‑149 (MQ=255) tCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagac > 2:1738734‑M1/1‑25 (MQ=255) gaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGTGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAAAACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGatt < 2:1269794‑M2/129‑1 (MQ=255) aaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGattat < 1:866559‑M2/131‑1 (MQ=255) aaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGattat < 2:629828‑M2/131‑1 (MQ=255) aatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGattatt < 1:2369879‑M2/132‑1 (MQ=255) gctgctTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtac > 2:1092038‑M1/1‑18 (MQ=255) gggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGTTTc < 1:1766490‑M2/139‑1 (MQ=255) ggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGTTTcc < 2:2079079‑M2/140‑1 (MQ=255) ctTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtacca < 2:1968117‑M1/148‑135 (MQ=255) caGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGTTTCCTGTGATTg < 2:1762136‑M2/148‑1 (MQ=255) aGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGTTTCCTGTGATTGc < 2:753540‑M2/149‑1 (MQ=255) cAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaa > 1:1211998‑M1/1‑3 (MQ=255) gtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcg > 2:1023897‑M1/1‑1 (MQ=255) | CTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGTTTCCTGTGATTGCGATAA > CP009273/997216‑997513 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |