| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1639688 | 1 (0.010) | 139 (0.910) | 110/296 | 0.2 | 99.3% | coding (203/288 nt) | relE | Qin prophage; toxin of the RelE‑RelB toxin‑antitoxin system |
| ? | CP009273 | = 1645805 | NA (NA) | intergenic (+11/‑3) | insD1/intQ | IS2 transposase TnpB;IS, phage, Tn; Transposon‑related functions; extrachromosomal; transposon related/pseudogene, Qin prophage; phage integrase family;Phage or Prophage Related | |||||
Only 100 of 270 total aligned reads displayed.
TCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTGACTCAAGTACTTCAACCAGCTTCTTTTTCAACTGTTCACGTACCGTCGAGCCC > CP009273/1639540‑1639837 | ttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTc > 1:29381‑M2/145‑150 (MQ=255)ttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTc > 1:678704‑M2/145‑150 (MQ=255) ctcCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTt < 1:2175658‑M1/149‑2 (MQ=255) tcCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGGTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtg > 1:1886527‑M1/1‑147 (MQ=255) cTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggat > 2:1467274‑M1/1‑145 (MQ=255) tGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatt > 2:2153030‑M1/1‑144 (MQ=255) tCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggattt < 1:1384984‑M1/149‑8 (MQ=255) tCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatt < 1:1501731‑M1/148‑7 (MQ=255) tgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCt < 1:1608881‑M2/14‑1 (MQ=255) cAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgc > 2:782842‑M1/1‑141 (MQ=255) cAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgccccta > 1:2107292‑M1/1‑136 (MQ=255) aaaGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgccccta > 2:118056‑M1/1‑135 (MQ=255) gCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatt > 2:1031980‑M1/1‑132 (MQ=255) gtgtCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccaga > 2:183660‑M1/1‑126 (MQ=255) tgtCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagac < 1:407116‑M1/150‑26 (MQ=255) gtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAg > 2:1663498‑M2/120‑150 (MQ=255) tCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacat > 1:731450‑M1/1‑123 (MQ=255) cggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGaa < 2:1550333‑M2/37‑1 (MQ=255) gTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatca < 1:1285281‑M1/150‑37 (MQ=255) gTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggacttgcccctatatttccagacatctgttatca > 2:1344265‑M1/1‑114 (MQ=255) cctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCg > 2:2185153‑M2/109‑150 (MQ=255) ctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCg > 2:282674‑M2/108‑149 (MQ=255) cGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcact > 2:358508‑M1/1‑111 (MQ=255) gAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcactta < 2:1353841‑M1/150‑41 (MQ=255) gAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcactt > 1:1091783‑M1/1‑110 (MQ=255) agacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGa < 2:476197‑M2/44‑1 (MQ=255) agacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGc > 1:2067154‑M2/105‑150 (MQ=255) aaaCAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaa > 1:807661‑M1/1‑109 (MQ=255) gacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCt > 2:200776‑M2/104‑150 (MQ=255) atcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTaa < 1:2375342‑M2/50‑1 (MQ=255) agaTGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccatt < 1:414426‑M1/150‑48 (MQ=255) gaTGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccatta < 2:674374‑M1/150‑49 (MQ=255) tcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTg < 1:465353‑M2/55‑1 (MQ=255) catctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagatgcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTg > 2:1945537‑M2/95‑149 (MQ=255) atctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTAAAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTa < 2:647322‑M2/57‑1 (MQ=255) aTGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagc < 1:1221773‑M1/149‑54 (MQ=255) aTGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagc < 1:1786549‑M1/149‑54 (MQ=255) tttGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgct > 2:540879‑M1/1‑92 (MQ=255) ctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAAt > 1:2362453‑M2/87‑148 (MQ=255) ctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAAt > 2:1980203‑M2/87‑148 (MQ=255) gTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgcc < 2:718431‑M1/149‑62 (MQ=255) caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAgg > 1:625822‑M2/84‑149 (MQ=255) agagAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccg > 2:2236931‑M1/1‑84 (MQ=255) gagaATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTcggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagat < 1:115098‑M1/150‑68 (MQ=255) gtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACgg < 1:1933538‑M2/76‑1 (MQ=255) gtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACg > 1:1120289‑M2/75‑149 (MQ=255) aTGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattc > 2:157848‑M1/1‑79 (MQ=255) tGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcc < 1:1298084‑M1/150‑73 (MQ=255) cGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccg < 1:454386‑M1/150‑75 (MQ=255) cGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccg > 2:1787252‑M1/1‑76 (MQ=255) aaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTg < 2:1825428‑M2/82‑1 (MQ=255) aaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTg > 2:1242518‑M2/69‑150 (MQ=255) aaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTg > 2:1121913‑M2/69‑150 (MQ=255) ccGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgag > 2:1730511‑M1/1‑69 (MQ=255) agtattaagactatcacttatataagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGc > 2:2050113‑M2/64‑150 (MQ=255) gtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGc < 1:2185153‑M2/87‑1 (MQ=255) gCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagc > 2:1704853‑M1/1‑67 (MQ=255) ccTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccatggagagcga > 2:1424215‑M1/1‑66 (MQ=255) cTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacc < 1:173626‑M1/150‑90 (MQ=255) gactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTAGACAAGGCGATAGCCTGAAGACCGGAGCTTACTCTTGTAACAATCAGGCATACCACGGAGCTTGTATGCTTCAATcc > 2:1910452‑M2/56‑150 (MQ=255) actatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCg < 2:1432495‑M2/96‑1 (MQ=255) tcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGt > 1:548087‑M2/51‑150 (MQ=255) cTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgca > 1:1149712‑M1/1‑54 (MQ=255) acttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTg < 1:282674‑M2/101‑1 (MQ=255) acttatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTGa < 2:2382359‑M2/102‑1 (MQ=255) ccGCGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcacta > 2:1398041‑M1/1‑51 (MQ=255) tatttaagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTGACt > 1:1572026‑M2/46‑149 (MQ=255) cGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactat < 2:1745247‑M1/150‑101 (MQ=255) aGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgc > 1:211033‑M1/1‑48 (MQ=255) aagtgatattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTGACTCAAGt < 2:1927189‑M2/109‑1 (MQ=255) tattggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTGACTCAAGTACTTCaa > 2:1630253‑M2/35‑150 (MQ=255) attggttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTGACTCAAGTACTTCAAc > 1:1688362‑M2/34‑150 (MQ=255) tCCCAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattc < 1:1629887‑M1/149‑114 (MQ=255) ttgtctggagattcagggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTGACTCAAGTACTTCAACCAGct < 2:408012‑M2/122‑1 (MQ=255) cAACAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtta < 1:1752219‑M1/150‑118 (MQ=255) cAGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataa > 2:1297159‑M1/1‑30 (MQ=255) aGAAATCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataat > 2:1223767‑M1/1‑29 (MQ=255) aaaTCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgc > 1:851812‑M1/1‑27 (MQ=255) aTCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctc > 1:1980838‑M1/1‑25 (MQ=255) tCACGAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcg < 1:2403264‑M1/150‑127 (MQ=255) gAAAACGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacg > 2:1521348‑M1/1‑20 (MQ=255) cagggggccagtcttCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTGACTCAAGTACTTCAACCAGCTTCTTTTTCAACt < 1:914879‑M2/134‑1 (MQ=255) aaaaCGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgc > 2:2413879‑M1/1‑19 (MQ=255) gggggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTGACTCAAGTACTTCAACCAGCTTCTTTTTCAACTGtt < 1:603590‑M2/137‑1 (MQ=255) aaaCGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcattatgcggatgccagtcgttataatgctcgaacgcc > 1:2261746‑M1/1‑18 (MQ=255) aaaCGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcc > 2:1606893‑M1/1‑18 (MQ=255) aaCGACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcct < 2:930157‑M1/150‑134 (MQ=255) gggccagtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTGACTCAAGTACTTCAACCAGCTTCTTTTTCAACTGTTCa < 1:1828886‑M2/139‑1 (MQ=255) gACAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctg < 2:617906‑M1/150‑137 (MQ=255) gACAACTTTCTCGTtggatttgacccctaattttcagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctg < 2:1886527‑M1/150‑137 (MQ=255) cagtctaCTCGTCTATAACCTGTTAGACAAGGCGATAGCCTGAACACCGGAGCCTAAACTTCTAACAATCAGGCATAACACGGAGCTTGTTTGCTTCAATCCGGGGTGACTCAAGTACGTCAACCAGCTTCTTTTTTAAATGTTCACGTa > 2:907481‑M2/8‑150 (MQ=255) cAACTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgca < 2:794086‑M1/150‑139 (MQ=255) aaCTTTCTCGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgc > 1:1461090‑M1/1‑11 (MQ=255) gtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTGACTCAAGTACTTCAACCAGCTTCTTTTTCAACTGTTCACGTAcc < 2:29381‑M2/145‑1 (MQ=255) gtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTGACTCAAGTACTTCAACCAGCTTCTTTTTCAACTGTTCACGTAcc < 2:2272814‑M2/145‑1 (MQ=255) gtctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTGACTCAAGTACTTCAACCAGCTTCTTTTTCAACTGTTCACGTAcc < 2:550045‑M2/145‑1 (MQ=255) tctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTGACTCAAGTACTTCAACCAGCTTCTTTTTCAACTGTTCACGTACCg < 2:2362453‑M2/146‑1 (MQ=255) ctaCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTGACTCAAGTACTTCAACCAGCTTCTTTTTCAACTGTTCACGTACCGt > 1:978416‑M2/4‑150 (MQ=255) tcGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactttgcggatgccattcgttataatgctcgaacgcctctgcaaggttctt > 1:1376489‑M1/1‑4 (MQ=255) ttggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgc > 1:1073549‑M1/1‑1 (MQ=255) | TCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAATCACGAAAACGACAACTTTCTCGTCTATAACCTGGTATACAAGGCGATAGCCTGAAGACCGGAGCTTAATCTTGTAACAATCAGGCATACCACGGAGCTTGTTTGCTTCAATCCGGGGTGACTCAAGTACTTCAACCAGCTTCTTTTTCAACTGTTCACGTACCGTCGAGCCC > CP009273/1639540‑1639837 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |