| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3372452 | 9 (0.060) | 266 (1.740) | 163/296 | 0.0 | 96.7% | coding (905/1128 nt) | yhcM | putative AFG1‑like family P‑loop ATPase |
| ? | CP009273 | 4487998 = | NA (NA) | intergenic (+241/‑91) | intB/insC1 | pseudogene, integrase homology;IS, phage, Tn; Phage‑related functions and prophages; KpLE2 phage‑like element; P4‑like integrase/IS2 repressor TnpA | |||||
Only 100 of 522 total aligned reads displayed.
ACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTC > CP009273/3372303‑3372601 | aCTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACAt < 2:296035/150‑1 (MQ=255) gacccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATc < 1:148789‑M2/6‑1 (MQ=255) aaCTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagac < 2:2378818‑M1/150‑6 (MQ=255) tgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAaacaa > 1:1893729‑M2/139‑150 (MQ=255) ttCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactgg > 2:1922337‑M1/1‑142 (MQ=255) gaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACAt > 1:297978‑M2/135‑149 (MQ=255) cgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCg < 2:594252‑M2/20‑1 (MQ=255) ttcgagcattattacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTa < 2:79456‑M2/22‑1 (MQ=255) gCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatc > 2:659825‑M1/1‑131 (MQ=255) gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATg > 2:1100293‑M2/126‑149 (MQ=255) gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGa < 1:1241724‑M2/25‑1 (MQ=255) cccTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGGCATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatct < 1:714845‑M1/150‑21 (MQ=255) ccTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctc > 1:773887‑M1/1‑129 (MQ=255) attataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGaaa > 2:695638‑M2/122‑148 (MQ=255) aTAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccaga > 1:1084811‑M1/1‑125 (MQ=255) aTAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccaga < 2:1639367‑M1/150‑26 (MQ=255) taacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACg < 2:256520‑M2/33‑1 (MQ=255) tttCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaacc < 2:1223803‑M1/150‑31 (MQ=255) tttCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaacc < 1:2325375‑M1/150‑31 (MQ=255) tttCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaac > 1:1538078‑M1/1‑120 (MQ=255) acgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGt < 2:2183778‑M2/34‑1 (MQ=255) cATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaa > 1:1673774‑M1/1‑117 (MQ=255) atgtcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGagag < 2:500788‑M2/39‑1 (MQ=255) atggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGagag < 2:142020‑M2/39‑1 (MQ=255) cAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatca > 2:1330259‑M1/1‑113 (MQ=255) gcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAAtata < 2:1466563‑M2/48‑1 (MQ=255) aCTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaa > 1:345668‑M1/1‑106 (MQ=255) gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCAt < 2:1042104‑M2/53‑1 (MQ=255) tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAg > 2:405389‑M2/97‑145 (MQ=255) tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATg < 2:369342‑M2/54‑1 (MQ=255) gctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTg < 2:925426‑M2/57‑1 (MQ=255) aCTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgata < 1:2002497‑M1/150‑53 (MQ=255) aCTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgata < 1:803714‑M1/150‑53 (MQ=255) ctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGa > 1:1946016‑M2/93‑150 (MQ=255) ctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGa > 1:1739958‑M2/93‑150 (MQ=255) ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTg > 2:1384717‑M2/90‑150 (MQ=255) ccacTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct > 1:954884‑M1/1‑93 (MQ=255) cacTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctt > 2:1615914‑M1/1‑92 (MQ=255) cacTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctt > 1:1057993‑M1/1‑92 (MQ=255) cgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCg > 1:595947‑M2/84‑150 (MQ=255) gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGt < 2:738079‑M2/68‑1 (MQ=255) aTTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatact < 2:126168‑M1/150‑64 (MQ=255) aTTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatact < 1:134090‑M1/150‑64 (MQ=255) ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTc < 1:850177‑M2/69‑1 (MQ=255) ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTAACTGCGGGCGTc > 2:1511074‑M2/82‑150 (MQ=255) ttGACATGGCGCTCGTAAAACTCATCCACAAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagacgggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactag > 2:2283335‑M1/1‑85 (MQ=255) ccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACg > 2:2128015‑M2/78‑150 (MQ=255) cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGcac < 1:1519111‑M2/76‑1 (MQ=255) gcgcTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga < 1:432521‑M1/150‑74 (MQ=255) cgcTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac < 2:1807977‑M1/150‑75 (MQ=255) atatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCg > 2:2040082‑M2/70‑149 (MQ=255) tatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCgta < 1:2381041‑M2/82‑1 (MQ=255) cTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg > 2:1575553‑M1/1‑65 (MQ=255) ggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGc < 1:2259788‑M2/96‑1 (MQ=255) caccaGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaaca < 2:841355‑M1/149‑91 (MQ=255) ccaGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagat > 1:1414300‑M1/1‑57 (MQ=255) ccaGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagat < 2:537071‑M1/150‑94 (MQ=255) gcAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgatt > 1:1866708‑M1/1‑52 (MQ=255) aTAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg > 1:501409‑M1/1‑49 (MQ=255) aaaGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtc > 2:2212957‑M1/1‑47 (MQ=255) ttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTTCGGGCGTCGACGCACAGCGTAGTAACAGAGACCGCCAGCGTCTGGTtc > 1:1018295‑M2/42‑150 (MQ=255) aagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTtct < 1:1619934‑M2/110‑1 (MQ=255) gccgcGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagg < 1:2115678‑M1/150‑109 (MQ=255) taacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGcc < 2:1776549‑M2/117‑1 (MQ=255) taacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGcc > 2:434430‑M2/34‑150 (MQ=255) cgcTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccg < 1:2214242‑M1/150‑113 (MQ=255) gcTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgcttgatgtcttagggccg > 1:2164091‑M1/1‑37 (MQ=255) gcTTCGCGCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccgg < 2:1163824‑M1/150‑114 (MQ=255) aacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGcc > 1:537108‑M2/33‑149 (MQ=255) gatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCAttg > 1:1806724‑M2/29‑150 (MQ=255) cGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggaga > 2:2092812‑M1/1‑33 (MQ=255) ctctCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaac > 1:2059310‑M1/1‑31 (MQ=255) tcCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacg < 2:333778‑M1/148‑121 (MQ=255) cATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgaatgatgtcttagggccggagaaacgca < 2:2160273‑M1/148‑123 (MQ=255) aTCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagac < 1:1779089‑M1/150‑126 (MQ=255) tCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacg > 1:1112940‑M1/1‑24 (MQ=255) aaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCAGGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGTCCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATg < 1:2276697‑M2/131‑1 (MQ=255) aatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATgg > 1:381478‑M2/19‑150 (MQ=255) aatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATgg > 1:1705505‑M2/19‑150 (MQ=255) aaCCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggc < 1:1174041‑M1/150‑129 (MQ=255) aCCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcg > 2:124678‑M1/1‑21 (MQ=255) taggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGa > 2:866786‑M2/15‑150 (MQ=255) ggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGt > 2:2401702‑M2/11‑150 (MQ=255) cATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccaca > 2:1072304‑M1/1‑14 (MQ=255) tAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtacca < 2:2263710‑M1/146‑135 (MQ=255) aatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGAt < 1:1385519‑M2/144‑1 (MQ=255) aCTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacag > 1:653464‑M1/1‑10 (MQ=255) tccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGAttt < 1:921028‑M2/146‑1 (MQ=255) cTGGTACATtagactggccccctgaatctccaaacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacagg > 1:1657068‑M1/1‑9 (MQ=255) caTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTc < 2:955438‑M2/147‑1 (MQ=255) caTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTc > 1:694179‑M2/3‑149 (MQ=255) gTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaa < 2:1703839‑M1/150‑145 (MQ=255) tACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTaa > 1:1294579/1‑150 (MQ=255) tACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTaa > 1:730098/1‑150 (MQ=255) aCATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAAc > 2:1854868/1‑150 (MQ=255) aCATCAAACAACATGACCGCATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAAc > 1:8952/1‑150 (MQ=255) cATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAAc < 2:1739958/149‑1 (MQ=255) aTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaa > 2:2326803‑M1/1‑2 (MQ=255) ttagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatc < 2:1894707‑M1/149‑149 (MQ=255) ttagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatc < 1:257808‑M1/149‑149 (MQ=255) | ACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTC > CP009273/3372303‑3372601 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |