| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 378046 | NA (NA) | 218 (1.430) | 102/296 | 0.4 | 99.1% | intergenic (+11/+1) | insD1/yaiX | IS2 transposase TnpB/pseudogene, interrupted by IS2A, acetyltransferase homolog; nonfunctional; interruped by IS2; putative transferase |
| ? | CP009273 | 997360 = | 2 (0.010) | coding (98/1071 nt) | elfG | putative fimbrial‑like adhesin protein | |||||
Only 100 of 362 total aligned reads displayed.
ACGAGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGTTTCCTGTGATTGCG > CP009273/997211‑997509 | gcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag < 1:716415‑M2/1‑1 (MQ=255)gcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag < 2:226622‑M2/1‑1 (MQ=255) caaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggacatataggggcaaatccagg < 2:2178930‑M2/2‑1 (MQ=255) caaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaga < 1:750328‑M2/2‑2 (MQ=255) aaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagat < 2:1587100‑M2/3‑3 (MQ=255) aagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatc < 1:2206404‑M2/4‑4 (MQ=255) aagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagat > 1:2040758‑M2/147‑147 (MQ=255) aagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagat > 1:1857115‑M2/147‑147 (MQ=255) agaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatca < 2:1468871‑M2/5‑5 (MQ=255) agaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatca < 1:545797‑M2/5‑5 (MQ=255) agaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatca < 2:2114506‑M2/5‑5 (MQ=255) gaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgttcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatcac < 1:1278373‑M2/6‑6 (MQ=255) gaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatcac > 1:1819941‑M2/145‑145 (MQ=255) gaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatcac > 2:1720177‑M2/145‑145 (MQ=255) gaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatcac < 2:161038‑M2/6‑6 (MQ=255) gaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtaataacagatgtctggaaatataggggcaaagccagatcac > 2:1409537‑M2/145‑145 (MQ=255) aaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatcact < 2:2314563‑M2/7‑7 (MQ=255) aaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatcac > 1:410207‑M2/144‑144 (MQ=255) aaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatcac > 1:763852‑M2/144‑144 (MQ=255) aaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatcac > 2:1931272‑M2/144‑144 (MQ=255) aaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatcac > 1:881240‑M2/144‑144 (MQ=255) accttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatcacta > 1:1184367‑M2/143‑143 (MQ=255) accttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatcacta > 1:2234440‑M2/143‑143 (MQ=255) accttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatcacta < 2:471756‑M2/8‑8 (MQ=255) ccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAgtgt > 1:2152989‑M2/142‑149 (MQ=255) aCCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGta < 1:1229429‑M1/148‑3 (MQ=255) ttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatc > 1:1066653‑M2/140‑140 (MQ=255) tgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagatca < 2:1066653‑M2/5‑5 (MQ=255) gAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactg < 1:964227‑M1/150‑8 (MQ=255) gcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCAt < 2:2152989‑M2/11‑1 (MQ=255) cagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCAtac > 2:363742‑M2/137‑149 (MQ=255) caaATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccc > 2:1034560‑M1/1‑137 (MQ=255) aaaTTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccct > 2:347059‑M1/1‑136 (MQ=255) aaaTTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccct < 2:1161209‑M1/150‑15 (MQ=255) ttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAggg > 2:2296903‑M2/129‑150 (MQ=255) cgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAgggg > 2:1298767‑M2/127‑149 (MQ=255) gcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATc < 2:84637‑M2/27‑1 (MQ=255) ataacgaatggcctccgcatagtgcgctgggttatcgctcgacacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGCAGTGTCATACTACTCAGGGGAATCCGta > 2:1952302‑M2/119‑149 (MQ=255) gcgAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaat < 2:707682‑M1/150‑34 (MQ=255) cgAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaata < 1:1704532‑M1/150‑35 (MQ=255) gAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatat > 2:1227366‑M1/1‑115 (MQ=255) gAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatat > 1:1812630‑M1/1‑115 (MQ=255) atccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAAt > 2:1650546‑M2/107‑150 (MQ=255) tGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcactta > 1:2126536‑M1/1‑108 (MQ=255) cgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAAtttt > 1:1573315‑M2/104‑150 (MQ=255) gcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTg > 2:65575‑M2/103‑150 (MQ=255) gCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaa > 1:621652‑M1/1‑107 (MQ=255) tGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagt < 1:1483064‑M1/149‑49 (MQ=255) cAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgat < 2:1875333‑M1/150‑52 (MQ=255) aTAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt > 2:185299‑M1/1‑96 (MQ=255) aTAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt > 1:1007516‑M1/1‑96 (MQ=255) aTCTTTGGAGAATAATGCGTGTCATTACCACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctaaatctccagacaaccaatatcacttaaataagtgatagtct < 2:1997114‑M1/149‑57 (MQ=255) aTCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctt < 1:297607‑M1/150‑58 (MQ=255) ttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTgg < 1:1670561‑M2/63‑1 (MQ=255) atcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTggag > 1:995592‑M2/86‑150 (MQ=255) tGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaat < 1:1390506‑M1/148‑61 (MQ=255) gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGgaa < 1:2329753‑M2/68‑1 (MQ=255) ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGgaag < 2:796989‑M2/69‑1 (MQ=255) ccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAAGCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGc < 1:1724595‑M2/73‑1 (MQ=255) acgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCaa < 1:1956153‑M2/75‑1 (MQ=255) gaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATAc < 2:1452253‑M2/79‑1 (MQ=255) tgtCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac > 1:1023762‑M1/1‑74 (MQ=255) tCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt < 1:2384047‑M1/150‑79 (MQ=255) cATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt > 1:1836526‑M1/1‑71 (MQ=255) cGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga < 2:1326452‑M1/148‑86 (MQ=255) gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTa > 1:1933423‑M2/56‑148 (MQ=255) tATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaa > 1:2416723‑M1/1‑59 (MQ=255) ttttttGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagat < 1:438339‑M1/150‑94 (MQ=255) ttttttGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacaga < 2:2057575‑M1/149‑93 (MQ=255) gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACa < 1:1326003‑M2/99‑1 (MQ=255) gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACa < 1:36‑M2/99‑1 (MQ=255) tGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgatt < 2:2341305‑M1/149‑98 (MQ=255) atgggttaagtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAAtt < 2:2420807‑M2/103‑1 (MQ=255) cgTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtct > 1:36934‑M1/1‑46 (MQ=255) gTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctt < 2:1812630‑M1/150‑106 (MQ=255) gTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctt < 2:635758‑M1/150‑106 (MQ=255) tCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctta < 1:1585694‑M1/150‑107 (MQ=255) agtgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTg < 1:932794‑M2/112‑1 (MQ=255) tgataacagatgtctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGa < 2:950349‑M2/114‑1 (MQ=255) aaTGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttag < 1:226723‑M1/147‑108 (MQ=255) aaTGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctcaagacaaccaatatcacttaaataagtgatagtcttaatacttgtttttagactagtcagtggagaacagatgattgatgtcttagg < 2:2010332‑M1/148‑109 (MQ=255) tctggaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATg < 2:1543427‑M2/126‑1 (MQ=255) cTCAAACCGCTGCTTATAGCGGGCAGtagactggcccccctatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagac < 2:2395889‑M1/150‑125 (MQ=255) tCAAACCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagac > 2:1738734‑M1/1‑25 (MQ=255) gaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGatta < 1:847551‑M2/130‑1 (MQ=255) gaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGatta < 1:173940‑M2/130‑1 (MQ=255) gaaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGa < 1:65575‑M2/127‑1 (MQ=255) aaatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGattat < 2:629828‑M2/131‑1 (MQ=255) aatataggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCTAATGattat > 1:560933‑M2/19‑149 (MQ=255) aaaCCGCTGCTTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagac < 2:762518‑M1/148‑126 (MQ=255) aaaCCGCTGCTTATAGCGGACAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacg < 2:1262945‑M1/149‑127 (MQ=255) taggggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGt > 2:270037‑M2/15‑150 (MQ=255) gctgctTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtac > 2:1092038‑M1/1‑18 (MQ=255) gggcaaatccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGTTTc < 1:1776850‑M2/139‑1 (MQ=255) gctTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtacca > 2:1476137‑M1/1‑15 (MQ=255) ctTATAGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtacca < 2:1968117‑M1/148‑135 (MQ=255) tccaGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGTTTCCTGTGAt > 1:2004993‑M2/5‑150 (MQ=255) aGCGGGCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacagg > 1:477422‑M1/1‑9 (MQ=255) caGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGTTTCCTGTGATTg < 2:1762136‑M2/148‑1 (MQ=255) ggCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGTTTCCTGTGATTGCg < 1:136243/150‑1 (MQ=255) | ACGAGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGTTTCCTGTGATTGCG > CP009273/997211‑997509 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |