| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2163652 = | NA (NA) | 142 (0.930) | 113/296 | 0.2 | 96.6% | intergenic (‑4/‑65) | gatR/insE1 | pseudogene, repressor for gat operon; interrupted by IS3; split galactitol utilization operon repressor, fragment 2; split galactitol utilization operon repressor, interrupted/IS3 transposase A |
| ? | CP009273 | = 2460975 | 5 (0.030) | coding (952/1158 nt) | intS | CPS‑53 (KpLE1) prophage; putative prophage CPS‑53 integrase | |||||
Only 100 of 266 total aligned reads displayed.
TCCTATGTCAGACCAGGTAGTTGAACTTCTCACTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGTATCTCGAT > CP009273/2460827‑2461124 | ccTATGTCAGACCAGGTAGTTGACCTTCTCACTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGt > 2:2338166‑M2/1‑148 (MQ=255) aataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAg > 1:784505‑M2/146‑150 (MQ=255) cTATGTCAGACCAGGTAGTTGAACTTCTCACTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtga < 1:1022316‑M2/150‑4 (MQ=255) tGTCAGACCAGGTAGTTGAACTTCTCACTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatct > 1:1590653‑M2/1‑144 (MQ=255) atgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGt < 2:1270316‑M2/8‑1 (MQ=255) gggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTgg > 2:1307874‑M2/138‑149 (MQ=255) ggcagccgtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttgctgtggcggcctcagtccggaacaatttgaaaataagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGaa < 2:501446‑M2/14‑1 (MQ=255) gACCAGGTAGTTGAACTTCTCACTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacc < 2:807656‑M2/149‑11 (MQ=255) caacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAg < 1:1346542‑M2/16‑1 (MQ=255) cAGGTAGTTGAACTTCTCACTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagc > 1:1920365‑M2/1‑136 (MQ=255) cAGGTAGTTGAACTTCTCACTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccag < 1:2142435‑M2/149‑14 (MQ=255) aacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGc > 2:1950518‑M2/134‑150 (MQ=255) cggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCgg > 1:2033475‑M2/132‑150 (MQ=255) ggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGt > 1:2364727‑M2/131‑150 (MQ=255) tAGTTGAACTTCTCACTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaata > 1:1083696‑M2/1‑132 (MQ=255) tgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCa > 1:426319‑M2/129‑150 (MQ=255) ttGAACTTCTCACTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtg < 2:1673044‑M2/150‑22 (MQ=255) aaCTTCTCACTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtgga > 2:1085963‑M2/1‑126 (MQ=255) aaCTTCTCACTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtgga > 1:207677‑M2/1‑126 (MQ=255) attatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGAtt > 1:278520‑M2/123‑150 (MQ=255) tctcACTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatct < 2:2298152‑M2/128‑7 (MQ=255) ctcACTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcg < 2:602524‑M2/150‑30 (MQ=255) aCTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggatacgcgg > 2:622633‑M2/1‑118 (MQ=255) cTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggct < 1:1502789‑M2/149‑33 (MQ=255) aCGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaag < 1:834520‑M2/150‑36 (MQ=255) gCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagt < 1:1690924‑M2/149‑37 (MQ=255) tgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTc < 2:1794175‑M2/41‑1 (MQ=255) tAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgag < 2:1336468‑M2/150‑40 (MQ=255) aGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagta > 2:22425‑M2/1‑109 (MQ=255) gCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaa > 2:1761191‑M2/1‑108 (MQ=255) aCCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcag > 1:1741264‑M2/1‑100 (MQ=255) gcggcggcacagttggtgtggcggcctcagtccggaacaatttgaagacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAAc < 1:1297859‑M2/56‑1 (MQ=255) gcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGaa < 1:1384108‑M2/55‑1 (MQ=255) ggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGa < 1:985647‑M2/58‑1 (MQ=255) gcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAg < 2:358371‑M2/59‑1 (MQ=255) cAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagagg < 2:1534607‑M2/150‑58 (MQ=255) ggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCa < 2:784505‑M2/61‑1 (MQ=255) ggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCa < 2:1147768‑M2/61‑1 (MQ=255) gTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtg > 2:290856‑M2/1‑91 (MQ=255) tctcAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtga > 1:1261100‑M2/1‑90 (MQ=255) agttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAAt > 2:1804499‑M2/85‑150 (MQ=255) agttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAAt > 1:1835998‑M2/85‑150 (MQ=255) agagTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgac > 1:80374‑M2/1‑86 (MQ=255) ttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATgg < 1:342208‑M2/68‑1 (MQ=255) gagTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTACGAGAACGCGGTACTGCTTGTGATCAAACAAATGGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactca < 2:680066‑M2/149‑65 (MQ=255) tttgtttTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatg > 1:956157‑M2/1‑82 (MQ=255) tgtttTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatga > 2:1502789‑M2/1‑80 (MQ=255) tttttGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgaca < 1:737715‑M2/149‑72 (MQ=255) tttttGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgaca < 1:1041339‑M2/149‑72 (MQ=255) gCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaac > 2:1573569‑M2/1‑73 (MQ=255) ccGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaaca > 1:1967011‑M2/1‑72 (MQ=255) gggCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagta > 2:1639103‑M2/1‑70 (MQ=255) agtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTAt < 1:2234741‑M2/82‑1 (MQ=255) tccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGaa < 2:2033475‑M2/86‑1 (MQ=255) aTAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagta > 1:1819811‑M2/1‑60 (MQ=255) agaagaagCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaa < 2:1358123‑M2/149‑93 (MQ=255) agaagaagCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaa > 1:602524‑M2/1‑57 (MQ=255) agaagaagCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaa < 2:2184427‑M2/149‑93 (MQ=255) gaagaagCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaa > 2:1022316‑M2/1‑56 (MQ=255) aagaagCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaa > 2:1507337‑M2/1‑55 (MQ=255) gaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGca > 2:436086‑M2/52‑149 (MQ=255) agaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCaaa < 1:1331134‑M2/106‑1 (MQ=255) gaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAAc < 1:2281564‑M2/107‑1 (MQ=255) gaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAAc > 1:1006652‑M2/44‑150 (MQ=255) gaacctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAAc > 1:2252347‑M2/44‑150 (MQ=255) aTCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaa > 1:876646‑M2/1‑46 (MQ=255) cctcgcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAAcggc > 2:190440‑M2/41‑150 (MQ=255) gagaACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcat > 2:834520‑M2/1‑40 (MQ=255) gcttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGAt < 2:2000956‑M2/114‑1 (MQ=255) cttaggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATc < 2:1595927‑M2/115‑1 (MQ=255) aaCGCGGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcg > 1:1444285‑M2/1‑37 (MQ=255) taggcctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCtg > 1:1224134‑M2/34‑150 (MQ=255) gcgGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcct > 1:72246‑M2/1‑34 (MQ=255) cgGTACTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcct < 2:1858284‑M2/149‑117 (MQ=255) cctgtgtccatattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCg > 2:1734419‑M2/30‑150 (MQ=255) cTGCTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaattt > 1:591838‑M2/1‑28 (MQ=255) cTTGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttc > 2:208391‑M2/1‑25 (MQ=255) ttGTGATCAAACAAATCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatcacataaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcg < 2:1918009‑M2/148‑125 (MQ=255) catattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGAtt < 2:2158408‑M2/128‑1 (MQ=255) atattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTa < 1:2169297‑M2/130‑1 (MQ=255) atattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTa > 1:1059885‑M2/21‑150 (MQ=255) atattacgtgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTa > 2:1824745‑M2/21‑150 (MQ=255) aaacaaaTCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagcc < 2:55990‑M2/150‑135 (MQ=255) tgggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATg < 1:479016‑M2/138‑1 (MQ=255) aacaaaTCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccc < 2:925938‑M2/150‑136 (MQ=255) ggtaggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGAATTACAACCATGc < 1:445064‑M2/139‑1 (MQ=255) aaaTCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctg < 1:662968‑M2/149‑138 (MQ=255) aaaTCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctg < 2:1873924‑M2/149‑138 (MQ=255) taggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCt > 2:46976‑M2/9‑148 (MQ=255) taggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCa < 2:2364727‑M2/142‑1 (MQ=255) aggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAg > 2:1467941‑M2/8‑150 (MQ=255) tCGGCTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagc > 2:1690924‑M2/1‑9 (MQ=255) ggatcaATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAg > 1:1766209‑M2/7‑149 (MQ=255) cTATGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgc < 1:532988‑M2/150‑146 (MQ=255) aATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGTAtct < 1:1804499‑M2/148‑1 (MQ=255) tgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctga > 1:1543208‑M2/1‑2 (MQ=255) tgtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctg < 2:867088‑M2/149‑148 (MQ=255) tGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGTATCTCGa > 2:1208397/1‑150 (MQ=255) tGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGTATCTCGa < 1:1657585/150‑1 (MQ=255) gtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaa < 2:658790‑M2/150‑150 (MQ=255) | TCCTATGTCAGACCAGGTAGTTGAACTTCTCACTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGTATCTCGAT > CP009273/2460827‑2461124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |