| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3180785 | NA (NA) | 250 (1.640) | 167/296 | 0.0 | 96.2% | pseudogene (6/2445 nt) | yqiG | pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein |
| ? | CP009273 | 3372448 = | 10 (0.070) | coding (909/1128 nt) | yhcM | putative AFG1‑like family P‑loop ATPase | |||||
Only 100 of 516 total aligned reads displayed.
TGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAA > CP009273/3372299‑3372597 | gcaaagcaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctccggcagcgggcttgtaaagggttaagtgataacagatgtctggaaatataggggcaaatccat < 2:1956673‑M2/1‑1 (MQ=255) caaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTa > 2:1793560‑M2/149‑150 (MQ=255) aagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACa > 2:818730‑M2/147‑150 (MQ=255) aaCTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACa < 2:585520/150‑1 (MQ=255) aCTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACAt > 2:923613/1‑150 (MQ=255) gaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATc < 2:2139287‑M2/6‑1 (MQ=255) cTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATt < 2:792534‑M1/150‑2 (MQ=255) cttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAaac < 2:2061856‑M2/10‑1 (MQ=255) aaCTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagac < 1:214587‑M1/150‑6 (MQ=255) tCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggc > 1:552768‑M1/1‑141 (MQ=255) agaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgttcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACAt < 2:1242087‑M2/15‑1 (MQ=255) agaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACAt < 2:209355‑M2/15‑1 (MQ=255) agaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACAt < 1:179493‑M2/15‑1 (MQ=255) aGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccc > 2:1580615‑M1/1‑139 (MQ=255) gcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGAcc < 1:2102286‑M2/19‑1 (MQ=255) cgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCg < 1:1335195‑M2/20‑1 (MQ=255) cgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCg < 1:363487‑M2/20‑1 (MQ=255) ttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTa > 1:2294468‑M2/129‑150 (MQ=255) gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGa < 1:1531472‑M2/25‑1 (MQ=255) cccTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGGCATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatct < 1:714845‑M1/150‑21 (MQ=255) ccTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctc > 2:1111871‑M1/1‑129 (MQ=255) aTAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccaga < 2:1639367‑M1/150‑26 (MQ=255) aTAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccaga > 1:1084811‑M1/1‑125 (MQ=255) aTAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccag < 1:733757‑M1/149‑25 (MQ=255) tttCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaacc < 2:1223803‑M1/150‑31 (MQ=255) acgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGt < 2:297978‑M2/34‑1 (MQ=255) aatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTga > 1:2403334‑M2/113‑148 (MQ=255) gcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataatagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAgcgc < 2:2290198‑M2/42‑1 (MQ=255) atccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCaa < 2:2364237‑M2/44‑1 (MQ=255) gcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAAtata < 2:1466563‑M2/48‑1 (MQ=255) aCTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaat < 1:815271‑M1/150‑45 (MQ=255) tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTc < 2:346260‑M2/51‑1 (MQ=255) gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCa < 1:1619190‑M2/52‑1 (MQ=255) gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCAt > 2:1385519‑M2/98‑150 (MQ=255) tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAg > 2:405389‑M2/97‑145 (MQ=255) gcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGt < 1:405389‑M2/50‑1 (MQ=255) gcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGc > 1:897453‑M2/96‑150 (MQ=255) cACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgat < 1:1852951‑M1/150‑52 (MQ=255) cACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtg < 1:1235370‑M1/148‑50 (MQ=255) tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGAc > 2:693740‑M2/92‑150 (MQ=255) accacTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtc < 2:1617778‑M1/149‑56 (MQ=255) ttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCg > 1:2231960‑M2/88‑150 (MQ=255) cacTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctt > 1:1057993‑M1/1‑92 (MQ=255) tatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCgg > 2:725620‑M2/87‑150 (MQ=255) aTTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatac > 1:775212‑M1/1‑87 (MQ=255) tttGACATGGCGCTCGTAAATCTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatacta < 2:548273‑M1/150‑65 (MQ=255) ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTc < 1:850177‑M2/69‑1 (MQ=255) ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTAACTGCGGGCGTc > 2:1511074‑M2/82‑150 (MQ=255) tcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTc > 2:1816622‑M2/81‑149 (MQ=255) gccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCg < 1:1640646‑M2/70‑1 (MQ=255) aCATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtt < 2:849552‑M1/149‑68 (MQ=255) aTGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggcccccttaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt < 2:1877886‑M1/150‑71 (MQ=255) cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTTAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGca > 2:104486‑M2/75‑149 (MQ=255) gggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGca > 1:1694923‑M2/74‑148 (MQ=255) gcgcTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga < 2:216529‑M1/150‑74 (MQ=255) gcTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac > 2:508536‑M1/1‑75 (MQ=255) tatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCg > 1:1776549‑M2/69‑148 (MQ=255) cGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt > 1:1454908‑M1/1‑72 (MQ=255) gTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCCTCATAACTGGTACATtagattggcgccctgaatctccagacaaccaatatcacttaattaagtgatagtcttaatactagtttttagactagt < 2:1908607‑M1/149‑79 (MQ=255) tAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtca > 2:629957‑M1/1‑70 (MQ=255) aaaCTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatt > 1:450128‑M1/1‑68 (MQ=255) aaaCTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatt < 2:222592‑M1/150‑83 (MQ=255) ggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTaa > 1:1726499‑M2/62‑147 (MQ=255) cagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTaaaa > 2:1262012‑M2/60‑147 (MQ=255) agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAgaga < 1:1665107‑M2/92‑1 (MQ=255) ttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAg > 1:129212‑M2/52‑150 (MQ=255) taatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGCGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGt < 2:2266342‑M2/102‑1 (MQ=255) aatgggttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTc > 2:2206988‑M2/48‑150 (MQ=255) gttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGtt < 2:1010738‑M2/108‑1 (MQ=255) ttaagtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTTCGGGCGTCGACGCACAGCGTAGTAACAGAGACCGCCAGCGTCTGGTtc > 1:1018295‑M2/42‑150 (MQ=255) cgccgcGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttag > 1:1413688‑M1/1‑43 (MQ=255) agtgataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTtctc < 1:1511074‑M2/111‑1 (MQ=255) gccgcGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagg < 2:434492‑M1/150‑109 (MQ=255) gccgcGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagg > 1:2328124‑M1/1‑42 (MQ=255) ataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGc > 1:665216‑M2/35‑150 (MQ=255) ataacagatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGc > 2:1747082‑M2/35‑150 (MQ=255) gatgtctggaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCAttg < 2:1432300‑M2/122‑1 (MQ=255) tctcCATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacg > 1:2050459‑M1/1‑30 (MQ=255) ccATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacg > 2:242304‑M1/1‑27 (MQ=255) cATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcaga < 1:923613‑M1/150‑125 (MQ=255) cATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcag < 1:608561‑M1/149‑124 (MQ=255) cATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgca < 1:1883410‑M1/148‑123 (MQ=255) cATCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgc < 2:954884‑M1/147‑122 (MQ=255) gaaatataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCt < 2:1342305‑M2/127‑1 (MQ=255) aTCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagac < 2:1074718‑M1/150‑126 (MQ=255) aTCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagac < 1:197445‑M1/150‑126 (MQ=255) tCAACCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacg > 1:1112940‑M1/1‑24 (MQ=255) atataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGc > 2:2398589‑M2/18‑150 (MQ=255) aaCCGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggc < 1:1174041‑M1/150‑129 (MQ=255) ccGCGTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgt < 2:1179858‑M1/150‑131 (MQ=255) ataggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGcc > 1:278168‑M2/16‑149 (MQ=255) gcgTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttatggccggagaaacgcagacggcgtac < 2:379272‑M1/150‑133 (MQ=255) gcgTCATAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctcaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtac < 1:1361223‑M1/150‑133 (MQ=255) aggggcaaatccaTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGAt > 1:1939163‑M2/14‑150 (MQ=255) cATAACTGGTACATtagactggccccctgtatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggctggagaaacgcagacggcgtaccaca > 1:2167080‑M1/1‑14 (MQ=255) aTAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagtaacgcagacggcgtacc > 1:2263710‑M1/1‑13 (MQ=255) tAACTGGTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacaca < 1:508536‑M1/150‑139 (MQ=255) ggTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaa > 1:321526‑M1/1‑7 (MQ=255) caTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTc > 1:694179‑M2/3‑149 (MQ=255) gTACATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaa < 2:1703839‑M1/150‑145 (MQ=255) | TGGAACTCAAACTTCAGCCGATCGCCCTGATAAATTTCATACAGCGGCACTTCTGCACTCACCACTAATTTGACATGGCGCTCGTAAAACTCATCCACCAGCGCAATAAAGCGCCGCGCTTCGCTCTCCATCAACCGCGTCATAACTGGTACATCAAACAACATGACCGTATGAAAGAGACGTGAGAGCGCAATATAGTCATGCTGACTGCGGGCGTCGACGCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAA > CP009273/3372299‑3372597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |