BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	1,484,245	T→C	pseudogene (726/750 nt)	gapC ←	pseudogene, GAP dehydrogenase; glyceraldehyde‑3‑phosphate dehydrogenase (second fragment)

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	1,484,245	0	T	C	100.0%	1067.2 / NA	278	pseudogene (726/750 nt)	gapC	pseudogene, GAP dehydrogenase; glyceraldehyde‑3‑phosphate dehydrogenase (second fragment)
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (153/125); total (153/125)

Only 100 of 278 total aligned reads displayed.

AAACACCGAACCGAAATGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑AC‑TTT‑TTTCCGAGAATCGATACCAGTTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTA  >  CP009273/1484099‑1484390

aaaCACCGAACCGAAATGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTc                                                                                                                                                 <  1:284129/150‑1 (MQ=255)

 aaCACCGAACCGAAATGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCa                                                                                                                                                <  2:1219892/150‑1 (MQ=255)

  acacCGAACCGAAATGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAg                                                                                                                                               <  2:1988177/150‑1 (MQ=255)

   cacCGAACCGAAATGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGt                                                                                                                                              >  1:619135/1‑150 (MQ=255)

    accgaaccgaAATGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGt                                                                                                                                              >  1:2113030/1‑149 (MQ=255)

     ccgaaccgaaATGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGa                                                                                                                                            <  1:1530900/150‑1 (MQ=255)

       gaaccgaaATGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGAcc                                                                                                                                          <  1:747563/150‑1 (MQ=255)

       gaaccgaaATGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGAcc                                                                                                                                          >  1:943426/1‑150 (MQ=255)

        aaccgaaATGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGAcc                                                                                                                                          >  2:2284730/1‑149 (MQ=255)

         accgaaATGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCg                                                                                                                                         >  2:136474/1‑149 (MQ=255)

            gaaATGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAAcc                                                                                                                                     >  1:679236/1‑150 (MQ=255)

            gaaATGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAAcc                                                                                                                                     <  1:2343312/150‑1 (MQ=255)

             aaaTGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCt                                                                                                                                    <  1:2416302/150‑1 (MQ=255)

             aaaTGGCTGCCAATGATATCGGAAGAGACTATTTCTGCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCt                                                                                                                                    >  1:1807071/1‑150 (MQ=255)

              aaTGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTg                                                                                                                                   <  2:1002646/150‑1 (MQ=255)

              aaTGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTg                                                                                                                                   >  2:1098686/1‑150 (MQ=255)

               aTGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGt                                                                                                                                  >  2:2105829/1‑150 (MQ=255)

                tGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGtt                                                                                                                                 >  2:1660713/1‑150 (MQ=255)

                          tGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCa                                                                                                                       >  1:1081479/1‑150 (MQ=255)

                           gATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCATCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCAc                                                                                                                      >  2:1652002/1‑150 (MQ=255)

                            atatCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCAcg                                                                                                                     >  1:1644590/1‑150 (MQ=255)

                            atatCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCAcg                                                                                                                     >  1:216183/1‑150 (MQ=255)

                                cGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGtt                                                                                                                 >  1:1103685/1‑150 (MQ=255)

                                 ggAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGtt                                                                                                                 <  1:1569622/149‑1 (MQ=255)

                                 ggAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTg                                                                                                                >  2:2007514/1‑150 (MQ=255)

                                 ggAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTg                                                                                                                <  2:1322109/150‑1 (MQ=255)

                                  gAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTgc                                                                                                               >  2:1127660/1‑150 (MQ=255)

                                   aaGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTgcg                                                                                                              <  2:1833283/150‑1 (MQ=255)

                                   aaGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTgcg                                                                                                              >  2:734842/1‑150 (MQ=255)

                                       gaCTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATg                                                                                                          <  1:2252998/150‑1 (MQ=255)

                                         cTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTCAAT‑TTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGAGTTGCGCATGAc                                                                                                        >  1:1453455/1‑150 (MQ=255)

                                           aTTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCt                                                                                                      >  2:1058589/1‑150 (MQ=255)

                                            tttCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCtt                                                                                                     >  2:174573/1‑150 (MQ=255)

                                              tcttcATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCttt                                                                                                    >  2:272127/1‑149 (MQ=255)

                                              tcttcATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCttt                                                                                                    <  1:359010/149‑1 (MQ=255)

                                               cttcATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTc                                                                                                   <  2:1807071/149‑1 (MQ=255)

                                                  cATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCa                                                                                                  <  2:2035459/147‑1 (MQ=255)

                                                  cATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAg                                                                                                 <  2:885135/148‑1 (MQ=255)

                                                   aTCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGttt                                                                                              <  1:1037996/150‑1 (MQ=255)

                                                     cGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCACCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGc                                                                                            >  2:2225469/1‑150 (MQ=255)

                                                      ggTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGcc                                                                                           >  1:1154503/1‑150 (MQ=255)

                                                               aaaTGACCCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTAACCGAACCTGTTTTCACCGGCACGCGTCGCGCATGACCTTTCAGTTTGCCGCTCAGTTc                                                                                  >  2:2281498/1‑150 (MQ=255)

                                                                aaTGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTcc                                                                                 <  1:127402/150‑1 (MQ=255)

                                                                    aCTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGa                                                                             >  1:1350984/1‑150 (MQ=255)

                                                                     cTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGAt                                                                            >  1:1631785/1‑150 (MQ=255)

                                                                        gTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCAc                                                                         >  1:319908/1‑150 (MQ=255)

                                                                        gTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCAc                                                                         >  2:1197116/1‑150 (MQ=255)

                                                                        gTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGCACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTTCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCAc                                                                         <  1:2277746/150‑1 (MQ=255)

                                                                               gtggtTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCATGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGAcc                                                                   <  2:972208/149‑1 (MQ=255)

                                                                                tggtTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCaa                                                                 >  2:1931801/1‑150 (MQ=255)

                                                                                 ggtTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAAt                                                                >  2:311333/1‑150 (MQ=255)

                                                                                 ggtTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAAt                                                                >  1:175537/1‑150 (MQ=255)

                                                                                  gtTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAAt                                                                <  1:616366/149‑1 (MQ=255)

                                                                                     gCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGc                                                             <  1:1136850/149‑1 (MQ=255)

                                                                                          tttAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTgc                                                       >  2:1411888/1‑150 (MQ=255)

                                                                                          tttAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTg                                                        <  1:1912049/149‑1 (MQ=255)

                                                                                          tttAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTg                                                        <  2:1690423/149‑1 (MQ=255)

                                                                                           ttAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTgcc                                                      >  2:215000/1‑150 (MQ=255)

                                                                                            tAAGTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTgccg                                                     >  1:813671/1‑150 (MQ=255)

                                                                                               gTGCGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGccc                                                  <  1:395209/150‑1 (MQ=255)

                                                                                                  cGTTATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCg                                               <  2:1865450/150‑1 (MQ=255)

                                                                                                    ttATTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTa                                             <  2:2116107/150‑1 (MQ=255)

                                                                                                      aTTCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAgt                                           >  1:1959336/1‑150 (MQ=255)

                                                                                                       ttCACCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAgtg                                          <  2:943426/150‑1 (MQ=255)

                                                                                                       ttCACCTCTTCGGCAGTC‑AC‑TTTATTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAgt                                           <  1:2035714/149‑1 (MQ=255)

                                                                                                          aCCTCTTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGtgtg                                        <  1:1212743/149‑1 (MQ=255)

                                                                                                            ctctTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTggg                                      >  1:372394/1‑149 (MQ=255)

                                                                                                              ctTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGaa                                   >  2:564659/1‑150 (MQ=255)

                                                                                                              ctTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGaa                                   >  2:707569/1‑150 (MQ=255)

                                                                                                              ctTCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGaa                                   >  1:90606/1‑150 (MQ=255)

                                                                                                               ttCGGCAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAAt                                  >  2:1895459/1‑150 (MQ=255)

                                                                                                                    cAGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTCTTTTCACCGGCACGCGCAGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGatat                             >  2:1948732/1‑150 (MQ=255)

                                                                                                                     aGTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATAtt                            <  1:2284730/150‑1 (MQ=255)

                                                                                                                      gTC‑ACTTTT‑TTTCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATAttt                           <  2:1714008/150‑1 (MQ=255)

                                                                                                                        tcactttt‑tttCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATAtttt                          >  1:1976882/6‑150 (MQ=255)

                                                                                                                         cactttt‑tttCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTc                         >  1:300359/5‑150 (MQ=255)

                                                                                                                          actttt‑tttCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTc                         <  2:1525159/146‑1 (MQ=255)

                                                                                                                          actttt‑tttCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCt                        >  1:1520682/4‑150 (MQ=255)

                                                                                                                          actttt‑tttCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCt                        <  1:1717961/147‑1 (MQ=255)

                                                                                                                           ctttt‑tttCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTg                       <  1:967506/148‑1 (MQ=255)

                                                                                                                             ttt‑tttCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATAtttt                          <  2:340326/145‑1 (MQ=255)

                                                                                                                             ttt‑tttCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGcc                     >  2:628932/1‑150 (MQ=255)

                                                                                                                             ttt‑tttCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGcc                     >  1:703236/1‑150 (MQ=255)

                                                                                                                              tt‑tttCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGc                      <  2:1631785/148‑1 (MQ=255)

                                                                                                                               t‑tttCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCg                    <  2:619135/149‑1 (MQ=255)

                                                                                                                                 tttCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCt                  >  1:1011498/1‑150 (MQ=255)

                                                                                                                                   tCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTgc                >  2:538532/1‑150 (MQ=255)

                                                                                                                                   tCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTgc                >  1:1696793/1‑150 (MQ=255)

                                                                                                                                   tCCGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTg                 <  2:679236/149‑1 (MQ=255)

                                                                                                                                    ccGAGAATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCGGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTgcg               >  2:857599/1‑150 (MQ=255)

                                                                                                                                      gagaATGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGcgcg             >  2:1454430/1‑150 (MQ=255)

                                                                                                                                         aatggacaCCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGa          <  1:776617/143‑1 (MQ=255)

                                                                                                                                         aaTGGACACCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTg           >  2:988560/1‑149 (MQ=255)

                                                                                                                                          atggacaCCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGaa         <  1:1381079/144‑1 (MQ=255)

                                                                                                                                             gacaCCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCa      <  2:378717/147‑1 (MQ=255)

                                                                                                                                             gacaCCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCa      <  1:452601/147‑1 (MQ=255)

                                                                                                                                             gacaCCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCa      <  1:564659/147‑1 (MQ=255)

                                                                                                                                               caCCAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACg    >  2:1461045/2‑150 (MQ=255)

                                                                                                                                                 ccAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGt   >  2:427222/1‑149 (MQ=255)

                                                                                                                                                  cAGCTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGa          >  1:185493/1‑141 (MQ=255)

AAACACCGAACCGAAATGGCTGCCAATGATATCGGAAGAGACTATTTCTTCATCGGTATAACCAAATGACTCGTTATTGGTGGTTGCTTGTTTAAGTGCGTTATTCACCTCTTCGGCAGTC‑AC‑TTT‑TTTCCGAGAATCGATACCAGTTCAGTGACCGAACCTGTTTTCACCGGCACGCGTTGCGCATGACCTTTCAGTTTGCCGCTCAGTTCCGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTA  >  CP009273/1484099‑1484390

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`