| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BA000036 | 414,931 | 0 | C | A | 25.0% | 65.0 / 11.5 | 40 | S73Y (TCC→TAC) | Cgl0391 | ABC‑type transporter, ATPase component |
| Reads supporting (aligned to +/- strand): ref base C (22/8); new base A (0/10); total (22/18) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.16e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GATCGGCATTTTCACAGCGCTGGTCGGCGGCCCAACATTCTTCATAATGTTGCGCCGAATGATGAAAAAGGGCGTGCACTAAATGGCCATTGTTTCCCTCGACAACGTCACCGTATCCATTGAAGGAAAAAAGCTTCTCGACGCCGTCTCCCTCAAGGCCTACCCCGGGGAAGTGTTGGGACTCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCGAACGTGAAATCACCACACTGTCAGGCGGCGAGCGGGCACGCGTTGCCTTGTCCCGTGTCCTTGCTCAGCAAACCCCCATTGTGCTGTTGGACGAACCAACAGCCGCGATGGATATCAGCCA > BA000036/414632‑415228 | gATCGGCATTTTCACAGCGCTGGTCGGCGGCCCAACATTCTTCATAATGTTGCGCCGAATGATGAACAAGGGCGTGCACTAAATGGCCATTGTTTCCCTCGACAACGTCACCGTATCCATTGAAGGAAAAAAGCTTCTCGACGCCGTCTCCCTCAAGGCCTACCCCGGGGAAGTGTTGGGACTCATCGGCCCAAACGGTGCCGGTAAATCCACTCTGCTGAGTGTCCTTTAAGGCGATCGGCTTCCCGATTAAGGCGACGTCAACGTCGGTGGCTTAGATCACGCAACAG‑TAC‑CGGCGTc > 2:351378/1‑300 (MQ=255) cccAACATTCTTCATAATGTTGCGCCGAATGATGAAAAAGGGCGTGCACTAAATGGCCATTGTTTCCCTCGACAACGTCACCGTATCCATTGAAGGAAAAAAGCTTCTCGACGCCGTCTCCCTCAAGGCCTACCCCGGGGAAGTGTTGGGACTCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATAGGGCCAGGGTGCGCGCacgcaagcc > 1:423599/1‑292 (MQ=255) aaCATTCTTCATAATGTTGCGCCGAATGATGAAAAAGGGCGTGCACTAAATGGCCATTGTTTCCCTCGACAACGTCACCGTACCCATTGAAGGAAAAAAGCTTCTCGACGCCGTCTCCCTCAAGGCCTACCCCGGGGAAGTGTTGGGACTCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTc > 1:231626/1‑299 (MQ=255) cttcATAATGTTGCGCCGAATGATGAAAAAGGGCGTGCACTAAATGGCCATTGTTTCCCTCGACAACGTCACCGTATCCATTGAAGGAAAAAAGCTTCTCGACGCCGTCCCCCTCAAGGCCTACCCCGGGGAAGTGTTGGGCCTCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAGGTCAACGTCGCTGGCTTAGATCCCGCAACAG‑CCG‑CGGCATCCGCTAGGGCCAGGGGGCGATGCGTCATGCGTCaaacggt > 2:353350/1‑295 (MQ=255) tcATAATGTTGCGCCGAATGATGAAAAAGGGCGTGCACTAAATGGCCATTGTTTCCCTCGACAACGTCACCGTATCCATTGAAGGAAAAAAGCTTCTCGACGCCGTCTCCCTCAAGGCCTACCCCGGGGAAGTGTTTGGACTCATCGGCCCAAACGTTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCCGGGTGCGAGCAGTCCTGCTTCAAGATGTcg > 2:321834/1‑299 (MQ=255) gcCAAAGGATGAAAACGGGCGTGCACTAAATGGCGATTGTTTCCCGCGACAACGTCACCGTATCCATTGAAGGAAAAAAGCTTCTCGACGCCGTCTACCTCAAGGCCTACCCCGGGGAAGTGTTGGGACTCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCAtttt < 2:421516/300‑1 (MQ=255) gAATGATGAAAAAGGGCGTGCACTAAATGGCCATTGTTTCCCTCGACAACGTCACCGTATCCATTGAAGGAAAAAAGCTTCTCGACGCCGTCTCCCTCAAGGCCTACCCCGGGGAAGTGTTGGGACTCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGGAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCCGTGTGCGAGCAGTCATGCGTCAAGATGCAAGTGTGGCATTttcat > 2:147194/1‑298 (MQ=255) tgaAAAAGGGCGTGCACTAAATGGCCATTGTTTCCCTCGACAACGTCACCGTATCCATTGAAGGAAAAAAGCTTCTCGACGCCGTCTCCCTCAAGGCCTACCCCGGGGAAGTGTTGGGACTCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGACCCCGCAACAG‑CAC‑CGGCATCCGATATGGCCAGGGTGCGACCTGTCACGCTTCAAAATGTCAGCGGGGCATTTTCCTCACTCg > 1:137159/1‑300 (MQ=255) tAAATGGCCATTGTTTCCCTCGACAACGTCACCGTATCCATTGAAGGAAAAAAGCTTCTCGACGCCGTCTCCCTCAAGGCCTACCCCGGGGAAGTGTTGGGACTCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCATTCCTCGTGTGGGACGTCGTAGa > 1:257527/1‑299 (MQ=255) ccATTGTTTCCCTCGACAACGTCACCGTATCCATTGCAGGAAAAAAGCTTCTCGACGCCGTCTCCCTCAAGTCCTACCCCGGGGAAGTGTTGGGCCCCATCGGCCCAAACGGTGCCGGAAAATCCACACTGCTGAGCGTCCTTTCCGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTCAGAGCCCGCAACAG‑CAG‑CGGCCGCCGATATGGCCCGGGTGCTAGCAGTCATGCTTCAAGATGTCCGGGTGGCATTTTCCTTCCTCCGGTGGGACGTCGTGGAGATGGGcg > 2:436435/1‑299 (MQ=255) ccATTGTTTCCCTCGACAACGTCACCGTATCCATTGAAGGAAAAAAGCTTCTCGACGCCGTCTCCCTCAAGGCCTACCCCGGGGAAGTGTTGGGACTCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGCAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCCGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCCAGTGTGGGACGTCGTAGAAATggg > 2:436425/1‑298 (MQ=255) cACCGTATCCATTGAAGGAAAAAAGCTTCTCGACGCCGTCTCCCTCAAGGCCTACCCCGGGGAAGTGTTGGGACTCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATACGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTc < 1:351378/300‑1 (MQ=255) tCCATTGAAGGAAAAAAGCGTCTCGACGCCGGCTCCCTCAAGGCCTAACCCGGGGAAGTGTTGGGACTCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGAAACAG‑CAG‑CGGCATACGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAAccccc < 1:321834/300‑1 (MQ=255) aaGGAAAAAAGCTTCTCGACGCCGTCTCCCTCAAGGCCTACCCCGGGGAAGTGTTGGGACTCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAagag < 2:231626/299‑1 (MQ=255) agtaaaaaaGCTTCTCGACGCTGTCTCCCACAAGGCCTACCCCGGGGAAGTGGTGGGACTCATCGGCCCAAACGGTGCCGGAAAACCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATCCAGGCGAAGTCAACGTCGGTGGCTTAGTTCCCGCAACAG‑CAG‑CGGCATACGAGATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGa < 1:187738/297‑1 (MQ=255) caaCGCCGTCTCCCTCAAGGCCTACCCCGGGGAAGTGTTGGGACTCAGCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGTTTTTGTTTTC‑AAGCAG‑AAGACGGCATACGAGATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGa < 1:475330/298‑1 (MQ=255) gCCTATCTCGGGGAAGTGTTGGGACTAATCGGCCCAAACGGTGCCGGAAAACCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCTCGATTCAGGCGAAGTCAACGTCGGTGTTTTATTTTTC‑AAGCAG‑AAGACGGCATACGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCAcc < 1:485574/300‑1 (MQ=255) ccccGGGAAAGTGTTGGGACTCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACATCGGTGGCTTAGATCCCGCAACGG‑CAG‑CGGCATCCGAGATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCg < 1:427664/298‑1 (MQ=255) aGTGTTGGGACTCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCt < 1:465213/300‑1 (MQ=255) gggatgcATCTGCCCAGAAGGTGGCGGAAAATCCACTCTGCTTAGTGTACTTTCAAGCGATCGGCTGCACGATTCAGGCGAAGTAAACTTCGGTTGTTTTGTTTTC‑AAGCAG‑AAGACGGCATACGAGATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCGa < 1:312695/294‑1 (MQ=255) gggACTCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTATATCCCGCACCAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCg < 1:353350/299‑1 (MQ=255) ggACTCATCGTAGCAAACGTTGCCAGAAAAGCCACTCAGCGGAGTGGCGTTTCAGGCGATCTGGTTCCCGATTCAGACGAATACAACGTCGGTGTCTTTGTTTTC‑AAGCAGAAAA‑CGGCATACGAGATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCGa < 1:93873/299‑1 (MQ=255) tCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGCTCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCCGTCATGCTTCAAGATCTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAACGGGCAGGCGGCCGTGGCAGACGGCGTCAACCCCCGAAGAGGCTCATGAAATCATCGAAGCAGCGCTTGCCGCGTCCTCGGTATCGCACCCTGCCGATCgc > 2:350006/1‑298 (MQ=255) tCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCGAACGt > 2:438208/1‑299 (MQ=255) tCGGCCCAAACGGTGACGGAAAATCCACTCTGCTGAGTGTCCTTGCAGGCGATCGGCTTCCCGATGCAGGCGAAGTCAACGGCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCAGCCGATAGGGCCAGGGTGCGAGCAGTCATGCTGCAAGATGGCAGAGTGGCATTTTCCTTCGTCGTGTGGGACGACGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGGACACACCCGGAGAGGAGAATGAAATCATCGAAGCAGCGCGTGGCGCAACCGCGGTAGCGGACCTTACCGAACGAGaa > 2:359518/1‑299 (MQ=255) ggTGCCGGAAAATCCACTCTGCTGAGTGTCCTGTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑AAG‑CGGCATACGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCGAACGTGAAATCACCACACTg < 1:206050/300‑1 (MQ=255) gTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGCGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCCACCCCCGAAGAGGATCATGAAATCCTCGACGCCGCGCTTGCCGCCACCTCGGTACCGCCCCGTGCCGACAGTGAAATCACCACCCTgc > 2:119633/1‑299 (MQ=255) aaaTCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAGAAGGATCATGAAATCATCGAATCAGCGCTTGCCGCCACCTCGGTGTCGCACCTTGCCGAACGTGAAATACCCACACTGTCAgggg > 2:303028/1‑296 (MQ=255) ccACTCGGCTGAGTGCCCTTGCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCGAACGTGAAATCACCACACTGTCAGGCGGCGAGc < 2:137159/300‑1 (MQ=255) ccACTCGGCAGAGAGACATTTCAGGCGATCGGCTTCCCGAGCCAGGCGAAGTCAACGTCGGTGGCGTAGAGGCCGCAACAG‑CAG‑CGGCATCCGATATGGACAGGGTGCGAGCAGGCATGCGTCAAGATGTCAGCGTGGCATAGTCCTTCCGCGGGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGGAGAAGGAGGCAAACCGCGAAGAGGATCAGGAAATGGTTGAAGTAGTGCTGGACGCCACCACGGTAGACCACCTTGCCTAAGCTAAAATAACAAGACTGttcgacgggggcg > 2:479987/1‑288 (MQ=255) aGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCGAACGTGAAATCACCCCCCTGTCAGGCGGCGaccagtccagcgtt > 2:226027/1‑287 (MQ=255) gCTTCCCGATTCAGTCGAAGTCAACGTCGGTCGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAACATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGCCGTAGAAATGGGCAGGCGGCCGTGGCAGCAGGCGTCAACCCCCGAAGACGATCATGAAATCATCGCAGCAGCGCCTGCCGACACCGCGGGATCGCACCTTGCTCAACGTGCAATCCCCACCCCCTCAGGCGGCGAGCGGCCACGCGCTGCTCTGCCCAGTGGCCtttg > 2:77584/1‑298 (MQ=255) cTTCCCGATTCAGGCGAAGTCAACGTCGGTGCCTTAGATCCCGCACCGG‑CAG‑CGGCATCCGATAGGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCGAACGTGAAATCACCACACTGTCAGGCGGCGAGCGGGCACGCGTTGCCTTGTCCCGTGTCCTTGCt < 2:257527/300‑1 (MQ=255) aCGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCGAACGTGAAATCACCACACGGTCAGGCGGCGAGCGGGCACGCGTTGCCTTGTTCCGTATCCTTGCCCAGCAACCCCCCATTCTGCtcg > 2:35610/1‑298 (MQ=255) tAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGCAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCGAACGTGAAATCACCACACTGTCCGGCGGCGAGCGGGCCCGCGTTGCCTTGTCCCGTGTCCTTGCTCAGCAACCCCCCATTGTGCTGGTGGACGAACCa > 2:152279/1‑299 (MQ=255) tcccaagccggagacGGCATACGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCGAACGTGAAATCACCACACTGTCAGGCGGCGAGCGGGCACGCGTTGCCTTGTCCCGTGTCCTTGCTCAGCAAACCCCCATTGTGCTGTTGGACGAACCAACAg < 1:164483/285‑1 (MQ=255) aCAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTGTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGGCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCGACCGGGAAAGCAAGACACAGTCAGGCGGGGAGCGGGCACGGGGTGCAGTGACCCGTGTCCTTGCTCAGCAAACCCGCAGTGGGCGGGAGGACGAAacaacaacaggggtg > 2:386278/1‑291 (MQ=255) agaag‑cGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCGAACGTGAAATCACCACACTGTCAGGCGGCGAGCGGGCACGCGTTGCCTTGTCCCGTGTCCTTGCTCAGCAAACCCCCATTGTGCTGTTGGACGAACCAACAGCCGCGATGGa < 1:226027/297‑1 (MQ=255) cag‑cGGCATCCGATATGGCCCGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCACGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCGAAAGTGAAATCACCACACTGTCCGGCGGCGAGCGGGCACGCGTTGCCTTGTCCCGTGTCCTGGCTCAGCAAACCCCCACTGTGCTCGTGGGTGCACCAACTGCcgcaacggct > 2:257873/1‑292 (MQ=255) g‑cGGCATACGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCGAACGTGAAATCACCACACTGTCAGGCGGCGAGCGGGCACGCGTTGCCTTGTCCCGTGTCCTTGCTCAGCAAACCCCCATTGTGCTGTTGGACGAACCAACAGCCGCGATGGATATc < 1:121721/300‑1 (MQ=255) aTCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCCCCTTGCCGAACGTGAAATCACCACACTGTCAGGCGGCGAGCGGGCACGCGTTGCCTTGTCCCGTGTCCTTGCTCAGCAAACCCCCATTGTGCTGTTGGACGAACCAACAGCCGCGATGGATATCAGaca > 1:424369/1‑300 (MQ=255) | GATCGGCATTTTCACAGCGCTGGTCGGCGGCCCAACATTCTTCATAATGTTGCGCCGAATGATGAAAAAGGGCGTGCACTAAATGGCCATTGTTTCCCTCGACAACGTCACCGTATCCATTGAAGGAAAAAAGCTTCTCGACGCCGTCTCCCTCAAGGCCTACCCCGGGGAAGTGTTGGGACTCATCGGCCCAAACGGTGCCGGAAAATCCACTCTGCTGAGTGTCCTTTCAGGCGATCGGCTTCCCGATTCAGGCGAAGTCAACGTCGGTGGCTTAGATCCCGCAACAG‑CAG‑CGGCATCCGATATGGCCAGGGTGCGAGCAGTCATGCTTCAAGATGTCAGCGTGGCATTTTCCTTCCTCGTGTGGGACGTCGTAGAAATGGGCAGGCGGCCGTGGCAGAAGGCGTCAACCCCCGAAGAGGATCATGAAATCATCGAAGCAGCGCTTGCCGCCACCTCGGTATCGCACCTTGCCGAACGTGAAATCACCACACTGTCAGGCGGCGAGCGGGCACGCGTTGCCTTGTCCCGTGTCCTTGCTCAGCAAACCCCCATTGTGCTGTTGGACGAACCAACAGCCGCGATGGATATCAGCCA > BA000036/414632‑415228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |