| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BA000036 | 1,994,392 | 0 | A | G | 25.4% | 259.8 / 86.2 | 128 | intergenic (‑271/+213) | Cgl1890/Cgl1891 | Hypothetical protein/Hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (45/49); new base G (17/15); total (63/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 128 total aligned reads displayed.
GGTAACTCGATAACATCTGAACGCATGTCCCCTGCAACTATGTCCCGCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCGAACACAGTCTACAAATCCGCTGCGATCAAAATAAACATCGACATCGGTGGTTCGTAGCGCAACGATTTCACCGAATCGAAGTGCGCCG > BA000036/1994096‑1994684 | ggTAACTCGATAACATCTGAACGCATGTCCCCTGCAACTATGTCCCGCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGAca < 1:523778/300‑1 (MQ=255) aCTCGATAACATCTGAACGCATGTCCCCTGCAACTATGTCCCGCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGAATTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAAcagca < 1:252150/299‑1 (MQ=255) aTCTGAGCGCATGTCCCCTGCAACTATTTCCCGCTTAGGCAGCGGGAGTTCCTCGCCATTTTCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCAc < 2:226685/300‑1 (MQ=255) tGAACGCATGTCCCCTGCAACTATGTCCCGCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAg > 2:18728/1‑300 (MQ=255) atcGCATGGCCCCTGCAACTATGTCCCGCTTAGGCGGCTGGAGTTCCTCGACATTATCTTTGCTATCGTTGCCTTGCTCAGGATACTCAACGACGACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAGCTACTCATCAGTGATTTCTTCTACAAGCTCAGA‑TAGATCTTCCACCTGTGCTTAGGCCGCCGGAGATGCAACCCCGATGGCCAGCAACATAGCAGCAGAAAC‑CCCCGCTAGt < 2:78455/297‑1 (MQ=255) aaCGCATGTCCCCTGCAACTATGTCCCGCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAg < 2:188624/298‑1 (MQ=255) aaCGCATGGCCCCTGCAACTCTGTCCCGCTTAGGCCGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGGATTGCTCGTGATACGCAACGACGACTTCTTGATGTGCTGTTTCGTAATCCTCAAGTTGGTCCTCAACTGTGGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAg < 2:82491/298‑1 (MQ=17) aCGCATGTCCCCTGCAACTATGTCCCGCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCt < 2:69731/300‑1 (MQ=255) cGCATGTCCCCTGCAACTATGTCCCGCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCtt > 1:488451/1‑300 (MQ=255) gCATGTCCCCTGCAACTATGTCCCGCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAgtcgtc < 1:513457/300‑1 (MQ=255) cccTGCAACTATGTCCCGCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCACA‑TTGATCTTCCACCTGTGCTTGTGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTAccca > 2:444987/1‑298 (MQ=255) ccTGCAACTATGTCCCGCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAAc > 1:289067/1‑300 (MQ=255) tGCAACTATGTCCCGCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCg > 2:102887/1‑300 (MQ=255) aaCTATGTCCCGCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGctt < 2:108894/300‑3 (MQ=255) tGTCCCGCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGCttatat < 2:206327/299‑1 (MQ=255) tGTCCCGCTTAGGCAGCGAGAGTTCCTCGACATTATCTGTACGATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGTATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGGGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAGCCGCatata < 1:330211/298‑1 (MQ=255) tCCCGCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTTTACAA‑CTCAAATTTAACCTTCAACTTGTGCTTAAGCCACCGGAGATCAAACCCCGTTGGCCAGCAACAGACAAGAAGAAAC‑CCCCACTAGCCTCCGTACCAAACGctattatca > 2:180183/1‑291 (MQ=255) cccGCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGCTGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTGATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAACCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAACACCCCAC‑ACACTTCGTACCAACCCCTTATATCaaa > 1:270604/1‑300 (MQ=14) gCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCt > 1:549724/1‑300 (MQ=255) gtaagccAGCGGGAGTTGCTCGACATTATCTTAACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGCTTATATCAAACCtt < 2:116322/294‑1 (MQ=255) aGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTa < 2:417031/299‑1 (MQ=255) gCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGCTTATATCAAACCTTTACCTGTc > 2:443997/1‑300 (MQ=255) ggAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGCTTATATCAAACCTTTACCTGTCgg > 1:57467/1‑299 (MQ=255) cTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAAtg < 2:17262/299‑1 (MQ=255) cTCGACAGTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAAGCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAAtg < 2:17274/299‑1 (MQ=255) gACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATTTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCGTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTGGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGCTTATATCAAACCTTTACCTGTCGGaaaatatgt < 1:297543/298‑6 (MQ=255) gACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGCTTATATCAAACCTTTACCTGTCGGaaaatatgt < 1:297563/298‑6 (MQ=255) aCATTATCTTTACTATCGTAGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACGCATCACTGATTCCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACACGACAGAAGAAAC‑ACCCACTAGTAGTCGGACCAAACGCCTAGATCAAACCCACAACTGTCGGacaatatgtac > 2:135837/1‑292 (MQ=14) cATTATCTTTACTCTCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGCTTATATCAAACCTTTACCTGTCGG‑AAAATATGTACa > 1:362062/1‑299 (MQ=255) cATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAAc > 1:362206/1‑260 (MQ=255) atcaTCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCCGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACAGCTTATATCAAACCTTTACCTGTCGG‑AAAATTTGTACaaa > 2:30936/4‑299 (MQ=11) aTTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAAcc < 2:362206/260‑1 (MQ=255) aTTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGCTTATATCAAACCttt > 2:161222/1‑277 (MQ=255) ttATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGCTTATATCAAACCTTTa < 1:161222/277‑1 (MQ=255) tCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCt < 2:543321/299‑1 (MQ=255) tCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCt > 2:249423/1‑299 (MQ=255) tCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTGCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTGCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCt < 2:152234/299‑1 (MQ=255) ttACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGCTTATATCAAACCTTTCCCTGTCGG‑AAAATATGTACAAACTGAgg > 2:57655/1‑299 (MQ=255) aCTATCGTTGACTTGCTCCTGCTACTCCACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGTAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGa < 1:133925/299‑1 (MQ=255) cTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGCTTATATCAAACCTTTACCTGTCGG‑AAAATATGTACAAACTGAGGATag > 1:107645/1‑299 (MQ=255) cTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGCTTATATCAAACCTTTACCTGTCGG‑AAAATATGTACAAACTGAGGATa < 1:483138/299‑1 (MQ=255) cGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCa > 1:400346/1‑300 (MQ=255) gTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGCTTATATCAAACCTTTACCTGTCGG‑AAAATATGTACAAACTGAGGATaggta > 1:167245/1‑294 (MQ=255) gTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGCTTATATCAAACCTTTACCGGGCGG‑AAAATATGTACAAACTGAGGATaggtaaa < 2:289067/300‑7 (MQ=11) gACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATaa < 2:299150/299‑1 (MQ=255) ttGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTc > 2:281718/1‑300 (MQ=255) ttGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTc > 2:281701/1‑300 (MQ=255) gCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCACCTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGCTTATATCAAACCTTTACCTGTCGG‑AAAATATGTACAAACTGAGGATaggtaaagaattag < 2:149396/299‑14 (MQ=1) gCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCACTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATGACAGCAGAAAC‑ACCCACTAGTCTTCGTACCAACCGCTTATATCAAACCTTTACCTGTCGG‑AAAATATGTACAAACTGAGGATaggtaaagaatta < 1:280878/298‑13 (MQ=11) cGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATGAATTCGCtt > 1:352006/1‑299 (MQ=255) tgctACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGTAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACACGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCCACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTCCCTGTCGGAAACATGTGTACAAGCTGAGGCTAAGCCTAAATTCGCtt > 2:373039/4‑297 (MQ=255) tgctACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCtt > 2:373050/4‑297 (MQ=255) aTACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAagag > 1:298438/1‑300 (MQ=255) aTACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAaga < 1:149231/299‑1 (MQ=255) aTACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCCGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAaga < 2:174766/299‑1 (MQ=255) tACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGc > 2:325379/1‑300 (MQ=255) gACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATa > 1:453330/1‑277 (MQ=255) actactTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATaa < 2:453330/277‑1 (MQ=255) actactTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGa > 1:121765/1‑298 (MQ=255) actactTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGa > 1:202060/1‑298 (MQ=255) actactTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGa > 1:202064/1‑298 (MQ=255) tgCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGctcct < 1:281701/300‑1 (MQ=255) gCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGctcct < 1:281718/299‑1 (MQ=255) cTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCctct < 1:332304/300‑1 (MQ=255) tttCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCctctc < 1:489657/298‑2 (MQ=255) ttCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCtttt < 1:136570/299‑1 (MQ=255) tAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAAtt > 2:3173/1‑256 (MQ=255) tAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCGTCTACAAGCTCAAA‑TTGATCGTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCAAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAAGTCGCTTAAGAGCTGGATGAAAGAGGAAACGCGCCTCTGTTCTAcc < 1:373039/300‑1 (MQ=255) aaTCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTc < 1:3173/256‑1 (MQ=255) ccTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGa > 1:168111/1‑299 (MQ=255) aaGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGaaaa < 1:419484/298‑1 (MQ=255) aGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATAAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAAACCCGATGGCCAGCAACATAACAGCAGAAAC‑ACCCACTAGTCATCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAAGGTGTACAAGCTGAGGATAAGCAGAAATTCGTTTAAGAGCGGGATGAAAGAGGACACGCTCCTCTTATCTACCCGAACAAgg > 1:224936/1‑300 (MQ=255) gttgttCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAggg < 2:469039/300‑1 (MQ=255) tCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCGTTTCTACCCGAAAAAGGGTGTa < 2:400346/299‑1 (MQ=255) ccTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGCTCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTTTCGGAAAAATGTGTACAACCTGAGGATAAGCATAAATTCGCTTAAGAGACGGATGAAAGAGGAAACGTTCCTCTTTTCTACCCGACAACGGGTGTAAg > 2:76321/1‑300 (MQ=255) ccTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTaa < 2:298438/299‑1 (MQ=255) ttGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCa < 1:504532/298‑1 (MQ=255) ttGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCAc < 2:202064/299‑1 (MQ=255) aTTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACATTTACCTGTCAGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAACGGGTGTAAGGATTGCACTGCTTAAg > 2:369690/1‑300 (MQ=255) tCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGt > 2:16982/1‑299 (MQ=255) cAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCggg > 1:116372/1‑300 (MQ=255) cAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTAACAGCGCAAA‑GTGATCATCCGCCGGTGCTTGAGCCACCGGAGATGCAGCCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTGTACCTGTCGGAAAAATGGGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCggg < 2:541061/300‑1 (MQ=255) acCATCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTTTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCaaa < 1:393651/300‑1 (MQ=255) atcaGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATTACAGCAGAAAA‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGCAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGTTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGACAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTATGCCCTCCCTGGCAAATCCTTa > 1:369533/1‑300 (MQ=255) caGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGACAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTCAGTGACATTAGGCCCTCCCGGGCAAATCCTTAtt > 2:387634/1‑300 (MQ=255) gCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCg < 1:360092/300‑1 (MQ=255) ctCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCGAAcaca < 1:214795/298‑1 (MQ=255) aGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCGAACACAGTCTACa > 2:527910/1‑299 (MQ=255) aGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGCAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCGAACACAGTCTACa > 2:527922/1‑299 (MQ=255) aTTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCGAACCAAGTCTACAAATcc > 1:512398/1‑300 (MQ=255) tttCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCGAACACAGTCTACAAATCCg < 1:249423/300‑1 (MQ=255) ccACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCGAACACAGTCTACAAATCCGCTGCGATCAAAATAAacatcgcaatcg > 1:63252/1‑300 (MQ=255) ccACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCGAACACAGTCTACAAATCCGCTGCGATCAAAATAAacatcgacat < 1:141463/298‑1 (MQ=255) aCCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCGAACACAGTCTACAAATCCGCTGCGATCAAAATCAACATCGACATCggt > 2:66984/1‑300 (MQ=255) tgtgCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCGAACACAGTCTACAAATCCGCTGCGATCAAAATAAACATCGACATCggtggt > 1:119931/1‑300 (MQ=255) gtgCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCGAACACAGTCTACAAATCCGCTGCGATCAAAATAAACATCGACATCGGTGGtt > 2:116380/1‑300 (MQ=255) cTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATGAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCGAACACAGTCTACAAATCCGCTGCGATCAAAATAAACATCGACATCGGTGGTTCGt < 2:352006/300‑1 (MQ=255) gATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCGAACACAGTCTACAAATCCGCTGCGATCAAAATAAACATCGACAGCGGTGGTTCGTAGCGCAACGATTTCACGGAAtag > 2:301978/1‑296 (MQ=255) gCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCGAACACAGTCTACAAATCCGCTGCGATCAAAATAAACATCGACATCGGTGGTTCGTAGCGCAACGATTTCACCGAATCGAAGTg < 1:325379/299‑1 (MQ=255) gCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCAGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCGAACACAGTCTACAAATCCGCTGCGATCAAAATAAACATCGACATCGGTGGTTCGTAGCGCAACGATTTCACCGAATCGAAGTGCGCCg < 1:369690/300‑1 (MQ=255) | GGTAACTCGATAACATCTGAACGCATGTCCCCTGCAACTATGTCCCGCTTAGGCAGCGGGAGTTCCTCGACATTATCTTTACTATCGTTGACTTGCTCGTGATACTCAACGACTACTTCTGGATGTGCTGTTTCGTAATCCTCAAGTTGTTCCTCAACTGTTGGAGCATTCCTATTGGGAACATAATCAACACCGTCATCAGCAAACTACTCATCAGTGATTTCTTCTACAAGCTCAAA‑TTGATCTTCCACCTGTGCTTGAGCCACCGGAGATGCAACCCCGATGGCCAGCAACATAACAGCAGAAAC‑CCCCACTAGTCTTCGTACCAACCGCATATATCAAACCTTTACCTGTCGGAAAAATGTGTACAAGCTGAGGATAAGCATAAATTCGCTTAAGAGCTGGATGAAAGAGGAAACGCTCCTCTTTTCTACCCGAAAAAGGGTGTAAGGATTGCACTGCTTAAGTGACATTAGGCCCTCCCGGGCAAATCCTTATTCGAACACAGTCTACAAATCCGCTGCGATCAAAATAAACATCGACATCGGTGGTTCGTAGCGCAACGATTTCACCGAATCGAAGTGCGCCG > BA000036/1994096‑1994684 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |