| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,512,617 | 0 | G | T | 24.7% | 166.8 / 11.8 | 81 | A11A (GCG→GCT) | typA | translational GTPase TypA |
| Reads supporting (aligned to +/- strand): ref base G (40/21); new base T (0/20); total (40/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.67e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAATGATCTTGAACGTGAACGCGGCATTACA > NZ_CP034943/1512481‑1512755 | tacccTTTTCAGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGatt < 2:1465377/138‑1 (MQ=255)tCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGatt < 2:1499873/140‑1 (MQ=255) ttttACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGc < 1:1514358/140‑1 (MQ=255) ttttACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGc < 1:217457/140‑1 (MQ=255) ttttACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGc < 1:652580/140‑1 (MQ=255) ttttACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGc < 1:1448056/140‑1 (MQ=255) ttttACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGc < 1:651665/140‑1 (MQ=255) tttACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGcc < 1:1895589/140‑1 (MQ=255) tttACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGcc > 1:765645/1‑140 (MQ=255) tttACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGcc < 1:1493858/140‑1 (MQ=255) ttACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACCTCGCGATTATTGccc > 2:1099104/1‑140 (MQ=255) cGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACg < 1:1934417/140‑1 (MQ=255) tattATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGtt < 2:1429333/138‑1 (MQ=255) ttATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGa > 2:290260/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 1:441653/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 1:1765388/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 1:655628/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 1:1276113/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 1:1521409/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 1:655460/1‑140 (MQ=255) tttACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGaaa > 2:168173/1‑140 (MQ=255) ctgCTTTTAAATAGTTTTTGTTTTTTATTGTTAATTTTATATAATTTTTTTAGGTTATCAAATTTTTAATCTTCGAATTTATCTTCCAAACATCGCGTTTTTTGCCCAGGTTTACAATGGGAAAACGACTCTAGTCGATc < 2:32744/138‑1 (MQ=255) actattttAAAGAGGATGTGTGTCATACTTTGAAAGTTATCTATTTTTATTCGGAGATTAAAAAGTGAAATTTCTAAATGATGTTCGCAACAGCGGTTTTTTTGCCCCCGTTGACCATGGGAAAACGACTCTAGTCGATc < 2:286400/136‑1 (MQ=255) aCGATTTTAAAGTTGTTGTGTGTTATATTTTTAAATTTATATAATTTTATTAGTATATTAAAAATTTAAACTTCCAAATGATATTCGAAACATCGCTATTAGGGCCCACGTTGACCAGGGCAAAACGACTCTAGTCGATc < 1:886023/140‑1 (MQ=255) tttAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCtt > 1:308806/1‑140 (MQ=255) gtggttgtgtgTTATAATTTTAATTTTATATAATTTTTTTTGTATATCAAAAAGTCAAAGTGCGAAATTATCTTCGAAACAGCGCTTTTTTGCCCCCCGTTCACCTTGGCAAAACGACTCTAGTCGATCAGCTTTTacac < 1:168173/135‑1 (MQ=255) gtttttttgGTTTAATTTTAAATTTATATAATTTTATTCGGAGATTAAAAAGTTAAACTTCGAAATGATGTTCGCAACATCGCGATTATTGCCCACGTTCACCTTGGCAAAACGACTCTAGTCGATCAGCTTTTACACCa < 2:638354/133‑1 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 2:1056616/1‑140 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 1:850430/1‑140 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 1:128117/1‑140 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACAAg > 1:275830/1‑140 (MQ=255) ttgtttgGTTTATTTTTAAATTTATATAATTTTATTAGGTTTTTAAAAAGTTAAAGTTCTAATTTATATTCGCAACATCGCGATTTTTCCCCCCTTTGACAATGGTAAAACGACTCTAGTCGATCAGCTTTTACACCAgg < 2:427987/139‑1 (MQ=255) tggtgtgtTATAATGTGAACTTTATCTATTTTTATTAGGAGATGAAAAAGTTAAACTTCGAAATTATGTTCGCAACACGGCGTTTTTTGCCCCGGTTGACCTTGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAgg < 1:1848834/138‑1 (MQ=255) cggtgtgtTATTATTTTAAATTTATATATTTTTATTTGTATATTAAAAAGTCAAATTTCGAATTTATCTCCCAAACATCGCTTTTTTTGCCCCCTTTCACCTGGGCAACACGACTCTAGTCGATCAGCTTTTACACCAgg < 1:1625435/138‑1 (MQ=255) atttgtgGTATAATGTTAATTTTATCTAATTTTATTAGCAGATCAAAATGTTAAACTCCGAATTGTTCTTCGCAAAATCGCTTTTATTGCCCACTTTGACCTTGGCAAAACGACTCTAGTCGATCAGCTTTTACACCAgg < 2:1497864/137‑1 (MQ=255) ttgTATATTGTTAAATTTAACAAATTTTATTAGTTTTTTAAAAAGTTAAACTTCTAAATTATGTTGGAAACATCGGTATTTTTGCCCAGGTTCACCTTGGTAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGt < 2:175143/138‑1 (MQ=255) gttataTTGTTAAATTTATATAATTTTATTTGGAGATTAAAAAGTGAAAATTCTAATTGATGTTCGCAACATCGCGTTTTTTGCCCAGGTTGACCTTGGCAACACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTa < 1:461642/138‑1 (MQ=255) gTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGACAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTAc > 1:693968/1‑140 (MQ=255) gTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTAc > 1:422249/1‑140 (MQ=255) tgtgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTcct > 2:1625435/1‑139 (MQ=255) tgtgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCg > 1:1789324/1‑140 (MQ=255) tgtgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCg > 1:571334/1‑140 (MQ=255) tgtgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCg > 1:1645015/1‑140 (MQ=255) tgtgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCg > 1:1387866/1‑140 (MQ=255) tgtgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCg > 1:1234716/1‑140 (MQ=255) tgtgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCAAAGTTGAACATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCg > 2:1655829/1‑140 (MQ=255) tgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACTACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTg > 1:887727/1‑140 (MQ=255) tgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTg > 2:1459087/1‑140 (MQ=255) tgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTg > 2:963052/1‑140 (MQ=255) tgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTAGTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCCGGCTGGTACGTTCCGTg > 2:781853/1‑140 (MQ=255) aaaTTTATCTAATTTTTTTAGGATATTAAAAATTTAAACTTCGAAATTATCTCCGCAAAATCGCTTTTATGGCCCACGTTCACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGcc < 2:349814/140‑1 (MQ=255) aaaGTTATCTAATTTTCTTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCACCATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCGGGGACGTTCCGTGcc > 1:1402542/1‑140 (MQ=255) aaaGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACTACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGcc > 1:505856/1‑140 (MQ=255) aaaGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGcc > 1:1451268/1‑140 (MQ=255) aaGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCa > 1:373360/1‑140 (MQ=255) aTCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACGATGGGAAATCGACTCTAGTCGATCAGCTTATACACCAGGCTGGTACGTTCCGTGCCAACGaa > 2:1647879/1‑140 (MQ=255) aTCTAATTTCATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCGGGTACGTTCCGTGCCAACGaa > 1:1957047/1‑140 (MQ=255) tCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAAc > 1:238396/1‑140 (MQ=255) ttaGGAGATTAAAAAGTCAAACTTCGAATTGATCTTCGAAACAGCGCGATTATGGCCCACGTTGACCATGGCAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGa < 2:872852/140‑1 (MQ=255) ttaGGACATCAAAAAGTCAAATTTCTATATAATCTTCCCAAACTGCCGTTTATGCCACACGTTTACCTGGGTAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTTGTACGGTCCGTGCCAACGAACAGGTTGCTGa < 2:505856/140‑1 (MQ=255) ttcaaaaaGTGAAATTTCTAAAGTATCTGCGCAACTTCGCGATTTTGGCCCAGGTTCACAATGGTAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCa < 2:1359412/137‑1 (MQ=255) aTGAAAAAGTCAAACTTCGAAAGTCAGTGCCCCACAGCGCTTTTTTGGCCCCCGTTGCCCTTGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCa < 1:1428732/140‑1 (MQ=255) caaaaaGTCAAACTTCGAAATGATCTTCGCAACATCGCTTTTATGGCCCACTTTCACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAAt < 2:238396/139‑1 (MQ=255) aaacaGTGAAAGTTCGAATGGATCCTCGCAAGCTCGGGATTCTTCCCCCCGTTGACCCTGGGATAACGACTCTAGTCGATCAGCTGTTACACCCGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATg < 2:1094545/140‑1 (MQ=255) aaaatGTCAAACTTCGAAATTATGTTCGAAACAGCGCTATTATTCCCCCCGTTGACCATGGCAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATg < 1:1055316/140‑1 (MQ=255) aaaaaTTCAAACTTCTAAATTATCTTCCCAACTTCGCTTTTATTGCCCACGTTGACCATGGCAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATg < 1:1002594/140‑1 (MQ=255) aaaaaGTTAAACTTCTAAATTATCTTCGCAACATCGCTTTTATTGCCCAGGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATg < 2:1765388/140‑1 (MQ=255) aaaGTCAAACTTCCAATTGATCTCCGAAACAGCGCTATTATTGCCCACTTTCACCTTGGTAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGa < 1:551991/140‑1 (MQ=255) gTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAAAGGActc > 1:167739/1‑140 (MQ=255) taaaCTTCAAAATCATATTCGCAACATGGCTATTATTGCCCAGTTGGACCTTGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTAGCTGAACGCGCAATGGACTCTa < 2:298068/139‑1 (MQ=255) caaaCTTCGAATTCTTCTCCGCAACAGCGCTTTTATGGCCCCCGTTGCCCCTGGCAACACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTa < 1:290260/139‑1 (MQ=255) aatttCCAAATTATCTTCCAAACTTCGCTATTATTGCCCCGGTTGACCAGGGCAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAAt < 1:1630424/137‑1 (MQ=255) aagttCGAAATGATCTGCCCAACAGCGCTTTTATTGCCCACGTGCACCATGGCAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAAt < 1:330519/137‑1 (MQ=255) aaCTTCGAAATGATCTTCGCAACATCGCTTTTTTTGCCCACGTTGACCTTGGTAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAAt < 1:1374990/140‑1 (MQ=255) aaaTGATCTTCGCAACCTCGCTATTTTTGCCCACGTTGACCATGGTAACACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAATGATCTtg < 2:765645/140‑1 (MQ=255) tCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAATGATCTtgaacgtg > 1:611940/1‑140 (MQ=255) tCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAATGATCTtgaacgtg > 1:1491361/1‑140 (MQ=255) tCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAATGATCTtgaacgtg > 1:1587915/1‑140 (MQ=255) tCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAATGATCTtgaacgtgaac > 1:723431/1‑140 (MQ=255) cgaaaaaTCGCTTTTATTGCCCAGGTTTACCATGGTAAAACGACTCTAGTCGATCATCTTTTACACCAGGCTGGTAAGTTCCGTGCCAACGAACATGTTGCTGAACGCGCAATGGACTCTAATGATCTtgaacgtgaacg < 2:787738/134‑1 (MQ=255) ccaaaCATGGCGTTTTTGGCCCCCGTTGACCTGGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAATGATCTtgaacgtgaacg < 1:1881863/137‑1 (MQ=255) cgcgATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAATGATCTTGAACGTGAACGCGGCATTa > 2:425308/1‑140 (MQ=255) cgcgATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAATGATCTTGAACGTGAACGCGGCATTa > 2:688298/1‑140 (MQ=255) cgcgATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAATGATCTTGAACGTGAACGCGGCATTa > 1:185516/1‑140 (MQ=255) cgcgATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAATGATCTTGAACGTGAACGCGGCATTa > 1:281378/1‑140 (MQ=255) cgATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAATGATCTTGAACGTGAACGCGGCATTACa > 2:943309/1‑140 (MQ=255) | TCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAACGAACAGGTTGCTGAACGCGCAATGGACTCTAATGATCTTGAACGTGAACGCGGCATTACA > NZ_CP034943/1512481‑1512755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |