Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP034943 | 2,270,052 | 0 | G | C | 30.6% | 138.0 / 17.1 | 89 | L43V (CTT→GTT) | prsW | glutamic‑type intramembrane protease PrsW |
Reads supporting (aligned to +/- strand): ref base G (33/26); new base C (1/25); total (36/53) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.18e-06 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
GGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACCTCTT > NZ_CP034943/2269914‑2270191 | ggTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGa > 1:416948/1‑140 (MQ=255) acTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAAccc < 1:558627/140‑1 (MQ=255) cTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCGGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGGGGGAAATACAAGAACAAcccc > 2:1102642/1‑140 (MQ=255) tGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCt > 2:1345153/1‑140 (MQ=255) aacATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCAGAATATAAAAAAGAAACGAAAAAGCTTCCGCCTCCAACATACTCTTTTTCAAGCAAGTAATGGATAAACATTTTGTGAAATACAAAAACAAAACCTAg > 2:164033/3‑140 (MQ=255) aCCATCAGTATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 1:993607/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTac > 2:1555089/1‑139 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 1:612078/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 1:317713/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 1:209446/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 2:166569/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 1:937485/1‑140 (MQ=255) aCCATCAGAAGAAACAATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAATAAACGAAAAACCTTCCGACTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAATAACAAACCATAg > 2:1598900/1‑140 (MQ=255) tCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGaaaa > 2:608842/1‑140 (MQ=255) tCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGaaaa > 2:607384/1‑140 (MQ=255) cataaTAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCAACAGTCTCTTTTTCATTCACGTACTGGCTAAACATTGTGGGAAATACAACAACAACCCCTAGaaaaa > 1:891770/4‑140 (MQ=255) cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGaaaaa > 1:719845/1‑140 (MQ=255) tAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGAc > 2:1944290/1‑140 (MQ=255) aaCCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGACATACAAGAACAACCCCTCGAAACAACGACCg > 1:1092513/1‑140 (MQ=255) aaCAATTTTATTGTTTCATACAAAAACCATTAATATAAAAAACAAACAAACACGCTTCCGCAGCCCACATTCTCTTTTTCAAGCAGGTCCTGTATAAAAATTGTGTGAAATACAATAACAACCCCTATAAAAAACGACCg < 1:1944290/140‑1 (MQ=255) aCCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGa > 2:752117/1‑140 (MQ=255) tttttAATGTTTCCTCCAAAACCCCTGAACATAAAAAACAACCGAAAACGCTCCCGCCTCCCACATTCTCTTTTTCAAGCACGTCCTGGATAAACTTTGTGGGAAATACACGAACACCCCCTACAAAAAACGACCGAAGc < 2:294558/139‑1 (MQ=255) aTTTTTTTGATTCCTAAAAAACCCCTTAACATAAAAAATAAACCAAAAAGCTTCCGCCTCCCACTTTATGTTTTTAAACCACTTACTGTATAAACTTTGTGGTAAATACAACAACACCCCCTACAAAAAACGACCGAAGc < 1:369078/140‑1 (MQ=255) aTTTTAATTATACCTCCAAAAACCCTTAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAAAATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGc < 2:1891257/140‑1 (MQ=255) tttAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCAc > 1:294558/1‑140 (MQ=255) tttAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTCTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCAc > 2:554818/1‑140 (MQ=255) tatagtGATTCCTCCAAAAACCATTAAAAAAAAAAATAAAACAAAAAGATTACGCCTCCCACATTCTCTTATTAAAGAACGTACTGGATAAACATTGAGGTAAATACAAGAACAACCACTAGAAAAAACGACCGAAGCAc > 2:1461039/6‑140 (MQ=255) ttAATTATTCCTCAAAAAACCCTGAATATAAAAAATAAACCAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCACGCACGTACTGGATAAACTTTGTGGGAAATACAAGAACAACCCCTACAAAAAACGACCGAAGCAcc < 1:636942/140‑1 (MQ=255) aaTTATTCCTCAAAAAACCCTGAATATAAAAAAGAAACGAAAAAGCTTCCGCCGCCCACTTTCTCTTTTTCAAGCACGTACTGGATAAACTTTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCat < 2:831623/140‑1 (MQ=255) aaTGATTCCTCCAAAAACACTGAAGATAAAAAAGAAACGAAACAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACTTTTTGGGAAATACAAGAAAAACCCCTATAAAAAACGACCGAAGCACCat < 2:1838936/140‑1 (MQ=255) aTGATTCCACAAAAAACCCGCAACATAAAAAATAAACCAAAACGCTTCCCCCGCCCAAATTCTATTTTTAAAGCCCGTACTGCATAAACTTTGGGGTAAATACACGAACACCCCATACAAAAAACGACCGAAGCACCata < 1:986256/140‑1 (MQ=255) ttcaacaaaaaaCCCTCAAAATAAAAAACAAACCAAAAAGCTCCCGCCACCCACATTCTCTTTTTCAAGCACGTACTGTATAAACATTGTGGCAAATACAACAACAACCCCTACAAAAAACGACCGAAGCACCATATGTa < 1:1032286/133‑1 (MQ=255) ttCCTCAAAAACCCCTGAAGATAAAAAAGACACGAAAAAGCTTCCGCCTCCCACATTCTCTTGTTCAAGCTCGTACTGGATAAACATTGTGGGAAATACACGAACACCCCCTACAAAAAACGACCGAAGCACCATATGTa < 2:1067719/140‑1 (MQ=255) ttCCACCAAAAACCATCACTATAAAAAAGAAACGAAAAAGCTTCCGCATCCCCCATTCTCTTTTTCAAGCACGTACTGTATAAACATTGTGGTAAATACAAGAACAACCCCTACAAAAAACGACCGAAGCACCATATGTa < 2:1352343/140‑1 (MQ=255) ttCATCCAAAAACCCTGAAGATAAAAAATAAACTAAAATGATTCCGCATCCAAAATTATCTTTTTAAAGCAGGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTa < 2:830046/140‑1 (MQ=255) tcccacaaaaaaCCCTCAACAAAAAAAACACACCAAAAAGATTCCCACACCAAAATACTATTTTTCAACCACCAACGGCATAAAAATTTTGGCAAAAACAACAACAACCCCTACACAAAACGACCGAAGCACCATATGTa < 1:564620/133‑1 (MQ=255) tacaacaaaaacCCCTGACAAAAAAAAACAAACCAAAAAGCTTCCGCCTCCCACATTATATTTTTCAAGCACGTAGTGTATAAACATTGTGGGAAATACACCAAAAACCCCTACAAAAAACGACCGAAGCACCATATGTa < 1:118724/133‑1 (MQ=255) tacaacaaaaaaCCCTTAACAAAAAAAAAAAACTAAAAAGCTGCCGCCTCCCACATTATTTTTTTAAAGCACGTACTGTATAAAATTTGTGGTAAATACAACAACACCCCCTACAAAAAACGACCGAAGCACCATATGTa < 1:1721111/133‑1 (MQ=255) tcctccAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTAc < 2:612078/140‑1 (MQ=255) cAAAACCCCTCAAGAAAAAAAATAAACCAAAACGCTTCCGCCTCCCACATTATCTTTTACACGCACTTACTGGATAAATATTGTGGTAAATACAACAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:1703808/140‑1 (MQ=255) cAAAAACCCTTAATATAAAAAACAAACCAAAACGCTTCCGCCCCCAACATTCTCTTTTTCAAGCACGTACTGTATAAACATTGTGGCAAATACACCAACAACCCCTACAAAACACGACCGAAGCACCATATGTACAGGtt < 2:719845/140‑1 (MQ=255) cAAAAACCCTTAAGATAAAAAAGAAACGAAAATGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGTAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:626250/140‑1 (MQ=255) cAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTATTTTTCAAGCACGTAGTGTATAAACATTGTGGTAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:1004348/140‑1 (MQ=255) cAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCCCCTCCCCCATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:801392/140‑1 (MQ=255) cAAAAACCCTCAACAAAAAAAACAAACCAAAAAGCTTCCGCCACCCACATTATCTTTTTCAACCACGTACTGGATAAACTTTGTGGCAAATACAACAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:379499/140‑1 (MQ=255) aaaaacCCCTCAAGAAAAAAAACAAACCAAAACGCTCCCGCCCCCCAAATTCTCTTTTTCAAGCCCGTAGTGGATAAACATTGTGGGAAATACAACAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:857225/139‑1 (MQ=255) aaaaaaCCTTCAATATAAAAAATAAACTAAAAATGTTCCGCGTCACAATTTCTGTTTTTCAAGCAATTACTTGTTAAACATTGTGGGAAATACAATACCAACCCAGAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:891770/139‑1 (MQ=255) aaaaaaCCCTTAAAATAAAAAACAACCCAAAAAGCTCCCGCCTCCCACTTTCTGTTTTTAAAGCACTTACTGTATAAACTTTGTGGCAAATACAACAACACCCCCTACAAAACACGACCGAAGCACCATATGTACAGGtt < 1:752117/139‑1 (MQ=255) aaaaaaCCCTGAAGATAAAAAACACACCAAAAAGCTGCCGCCCCCCAATTTCTCTTTTTAAAGCACGTCGTGTATAAACTTTGTGGGAAATCAACCAACACCCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:1237369/139‑1 (MQ=255) aaaaaaCCCTGAAGATAAAAAACAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAAAATTGTGGGAAATACAAGAACACCCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:625110/139‑1 (MQ=255) aaaaaaCCCTCAACATAAAAAAGAAACTAAAACGCTCCCGCCTCCCACATTCTCTTTTTCAAGCCCGTACTGGATAAACATTGTGGGAAATACAACAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:521524/139‑1 (MQ=255) aaaaaaCCCTAAAAAAAAAAAAAAAACCAAAAAGCTGCCGCCTCCCAATTTCTATTTTTAAACCACGTACTGGATAAACCTTGTGGCAAATACAACAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:841961/139‑1 (MQ=255) aaaaaaCCATCAATATAAAAAAAAAACCAAAACGCTTCCGCCTCCCAATTTCTCTTTTTAAAGCACTTACTGGATAAACTTTGTGGTAAAAACACCAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:858019/139‑1 (MQ=255) aaaCCCTGAAGATAAAAAAGAAACGAAACAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGCTAAACCTTGTGGGAAATACAAGAACAACCCCTAGCAAAAACGACCGATGCTCCATATGTACAGGTTCAt > 2:191772/1‑140 (MQ=255) gAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACTTTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATa < 2:10096/140‑1 (MQ=255) aaaaaGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCt > 1:1324358/1‑140 (MQ=255) aaaaaGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCt > 2:822676/1‑140 (MQ=255) taaaCTAAAAAGCTTCCGCATCCAACATTCTATTTTTCAAGCACGTACTGTTTAAAAATTGTGGTAAATAAAACAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTtaa < 1:1453193/139‑1 (MQ=255) caaaCCAAAACGCTTCCGCCCCCCAAATTATCTTTTTAAAGCACGTACTGGATAAACATTGTGGCAAATACAACAACACCCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTtaa < 1:1360975/139‑1 (MQ=255) gAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTtaaataaa < 2:937485/140‑1 (MQ=255) caaaacGCTCCCGCCTCCCACATTCTCTTTTTCAAGCACGTATGGGATAAACATTGTGGGAAATACCAGCACAACCCCTAGAAAAAACGACCGAAGCACCCTATGTACAGGTTCATTATCATACTGATCTTTtaaataaa < 1:1826485/139‑1 (MQ=255) caaaaaGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGTATAAACATTGTGGTAAATAAAACAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTtaaataaa < 1:1345153/139‑1 (MQ=255) ccGCATCCCACATTCTCTGTTTCAAGCACGTACTGTATAAACTTTGTGGTAAATACAACAACAACCCCTATAAAACACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTaa < 1:554818/140‑1 (MQ=255) ccccACATTCTCTTTTTCAAGCACGTACTGTATAAACATTGTGGGAAATACAACAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAgcg < 1:587011/139‑1 (MQ=255) ttCACTTTTACAAGCACGTACTGGATAAACATTGTGGGAAATACACCAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGcc < 1:1369394/140‑1 (MQ=255) tctcTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCg > 2:454147/1‑140 (MQ=255) tCAAGCACGTCCTGGAAAAACATGGTGGGAAAGACCACAACAACCCCCCCAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAAt < 1:704978/140‑1 (MQ=255) tCAAGCACGTACTGGATAAACATGGTGGGAAATACAAGAACAACCCCTCCAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGAGGCCGGGAGCAAt < 1:1387482/140‑1 (MQ=255) gCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGAGCGATGCCGGGAGCAATTCCt > 2:1088736/1‑140 (MQ=255) cACGTACTGGATAAACATTGTGGTAAATACAAGAACAACCCCTATAAAACACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTg < 2:30830/140‑1 (MQ=255) cACGTACTGGAAAAACTGTGTGGTAAATACAAGAACAACCCCTATAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAACATAACTTAACAGCGCGATGCCGGGAGCAATTCCTg < 2:30809/140‑1 (MQ=255) cACCTACTGTATAAACATTGTGGCAAATACAAGAACAACCCCTAGACAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTg < 2:745314/140‑1 (MQ=255) cgcaCTGGATAAACATTGTGGGAAATACAACAACAACCCCTACAAAACACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCa < 1:121820/137‑1 (MQ=255) aCTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCagag > 2:412591/1‑140 (MQ=255) tgtaTAAACATTGTGGTAAATAACACAAAAACCCCTATAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAgat < 1:1048264/137‑1 (MQ=255) aCATTGTGGTAAAAACAACAACAACCCCTCGAAAACACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGAGGCCGGGGGCAATTCCTGCAGAGATGATTGCa < 1:262275/140‑1 (MQ=255) gtgGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATCTGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt > 1:1307792/1‑140 (MQ=255) gtgGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt > 1:390502/1‑140 (MQ=255) gtgGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt > 1:1419481/1‑140 (MQ=255) gtgGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt > 2:1278194/1‑140 (MQ=255) gtgGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt > 1:404786/1‑140 (MQ=255) gtgGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt > 2:1278182/1‑140 (MQ=255) gggAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCa > 1:1791853/1‑140 (MQ=255) aaaTACAAGAACACCCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGc < 1:661514/140‑1 (MQ=255) aaaTACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGc < 1:1462711/140‑1 (MQ=255) aaaTACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGc > 1:1831216/1‑140 (MQ=255) aaaTAAAACAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGc < 1:409098/140‑1 (MQ=255) aGAACACCCCCTACAAAAAACGACCGAAGCACCATATCGACAGATTCATTCTCATACTGATCTTTTAAATAAAAATCACTTAACAGCGCGACGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACctct < 1:478200/140‑1 (MQ=255) aGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACctct < 2:1671654/140‑1 (MQ=255) gAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACCTCtt > 1:1056294/1‑140 (MQ=255) | GGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACCTCTT > NZ_CP034943/2269914‑2270191 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |