| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 91969 | NA (NA) | 11 (0.040) | 5/250 | NT | NA | intergenic (+131/‑39) | EO946_RS00485/EO946_RS00490 | 16S ribosomal RNA/23S ribosomal RNA |
| ? | NZ_CP034943 | 91973 = | NA (NA) | intergenic (+135/‑35) | EO946_RS00485/EO946_RS00490 | 16S ribosomal RNA/23S ribosomal RNA | |||||
ACCTCCTTTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/91830‑91969‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aGTAAGACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGGACGAACACCGATATGCTTCGGGGAGC > NZ_CP034943/91973‑92093 ACCTCCTTTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAA < 1:4803510/140‑1ACCTCCTTTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAA < 2:560892/140‑1ACCTCCTTTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAA > 2:1796327/1‑140ACCTCCTTTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAA > 1:4149635/1‑140 TTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAgtac > 1:3593052/1‑136 TTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTACTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTCGACATCACATACAAGTAgtaa > 2:3735986/1‑136 TTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTT > 2:4557671/1‑140 TTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCACGTAATACAAGATATCACATAGTGATTCTTGTTAACGGTTAAGTGAGAAAGGGCCCACGGGTGTTGCCTTGGCAg > 2:3517500/1‑139 TTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTCACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCAC > 2:3517271/1‑140 gGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGAG > 1:4637553/2‑140 gGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGAG > 1:1644558/2‑140 gGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGAG > 1:1806596/2‑140 TCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGAC > 1:2460647/1‑140 TCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGAC > 1:210310/1‑140 GATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGGACGAACACCGATATGCTTCGG < 2:210310/140‑1 GATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGGACGAACACCGATATGCTTCGG < 2:2460647/140‑1 CAGTAGACAACCCATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTACGTTAGACAGGGCGCACGGGGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGGACGAACACCGATATGCTTCGGGGAGC < 1:1897882/140‑1 ACCTCCTTTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/91830‑91969‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aGTAAGACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGGACGAACACCGATATGCTTCGGGGAGC > NZ_CP034943/91973‑92093 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |