BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	607,671	C→G	6.5%	P172A (CCA→GCA) ‡	EO946_RS03185 →	collagen‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	607,671	0	C	G	6.5%	477.0 / 22.6	189	P172A (CCA→GCA) ‡	EO946_RS03185	collagen‑like protein
Reads supporting (aligned to +/- strand): ref base C (89/83); new base G (11/2); total (103/86)
Fisher's exact test for biased strand distribution p-value = 2.33e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 194 total aligned reads displayed.

GGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTA  >  NZ_CP034943/607533‑607809

ggAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGCCGGACCTGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCTGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGAcc                                                                                                                                           >  2:1176858/1‑140 (MQ=17)

    cTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCGACGGGGGAAGCCGGACCAGCCGGCGCGACAGGCGCTACCGGGGACGCCGGACCAGCCGGCGCGCCAGGAGCTACCGGGGAAGCCGGACCAAcc                                                                                                                                       >  1:3451431/1‑140 (MQ=18)

      acgggggAACCGGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                                                                     <  2:2909551/137‑1 (MQ=255)

      aCCGGGGCAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTCCGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                                                                     <  2:608775/140‑1 (MQ=255)

      aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACTGGGGCGACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACAGGGGAACCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGAACGCGGACCAACCgg                                                                                                                                     >  2:3337170/1‑140 (MQ=18)

      aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGCAGCGACAGGAGCAACCGGGGAAGACGGAACagcagc                                                                                                                                     >  1:2528333/1‑135 (MQ=17)

      aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACAGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACGGGGGCAGCAGCACCGCCCgg                                                                                                                                     >  2:1362121/1‑140 (MQ=14)

       ccGGGGAAGCCGGACCCGCCGGGGCCACGGGAGCCACAGGCGCTACTGGGGAAGCCGGACCACCCGGCGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGGGACAGGAGCTACCGGGGAAGCCGGACCAACCGGa                                                                                                                                    <  1:4456056/140‑1 (MQ=18)

       ccGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGa                                                                                                                                    <  1:103556/140‑1 (MQ=255)

       ccGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGa                                                                                                                                    <  1:2715874/140‑1 (MQ=255)

            gacgCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                                                               <  1:2677074/137‑1 (MQ=255)

            gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                                                               <  2:1807349/140‑1 (MQ=255)

            gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                                                               <  2:2011112/140‑1 (MQ=255)

                 cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAGCCGGAGCGACAGGAGCGACCGGGGACACCGGACCACCCGGAGCGCCGGGAg                                                                                                                          >  2:2160360/1‑140 (MQ=17)

                    aCCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGCAACAGGCCCAGGCGCACCGGCAGGAGcga                                                                                                                       >  1:3694836/1‑138 (MQ=14)

                       cgCCGGGGCCACGGGAGCCCCCGGGGCTACTGGGCAAGCCGGCCCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCAcag                                                                                                                    <  1:3569450/139‑3 (MQ=11)

                         ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGACGCAGGCCCACGCGCAGCGACAGGAGCCACAggc                                                                                                                  >  2:4057652/1‑139 (MQ=14)

                         ccGGCGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                                                                                                  <  1:3839947/140‑1 (MQ=255)

                             ggCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACCggcgccg                                                                                                              >  2:97875/1‑135 (MQ=255)

                              gCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                                                                                                          >  2:2600262/1‑127 (MQ=255)

                                   gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCggcc                                                                                                        >  1:312025/1‑138 (MQ=255)

                                   gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGAAGCCGGACCATCCCGAGCGACCGGAGCAACCGGGCAAGcagtac                                                                                                        >  1:1097021/1‑135 (MQ=14)

                                        ccACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                                                               <  2:2550065/112‑1 (MQ=40)

                                         cacaGGGGCTACTGGGGAAGCCGGAGCCGCCGGAGCGCCAGGAGCGACCGGGGACGCCGGACCAGCCGGGGCGACAGGCGGGGGCGGGGCAGCCGGACCAACCGGAGCGACAGGAGCGACGGGGGCAGCCGGAccgggcg                                                                                                  >  1:516161/1‑135 (MQ=14)

                                         cacaGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCGGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCg                                                                                                  >  2:651091/1‑140 (MQ=255)

                                         cacaGGGGCGACTGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACCGGAGCTCCCGGGGCCGCCGGCCCACCCGGCGCGCCCGGAGCTCCCGGGGCCGCCGGCCGAGCCg                                                                                                  >  2:3259339/1‑140 (MQ=14)

                                                gCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACCGGAGCAACCGGCGAGTCCGGACAATCCGgcgctcc                                                                                           >  1:2491382/1‑137 (MQ=11)

                                                  tACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAg                                                                                         >  1:4620104/1‑140 (MQ=255)

                                                  tACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGCGAAGCCGGACCAACCGGAGCGACAGGAGCCACCGGAGCCGCAGGAACAGCCGGAGCgcgct                                                                                         >  2:1521112/1‑136 (MQ=14)

                                                   aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACTGGAGCTACAGGGGAAGCCGGACCACCCGGAGCGCCAgg                                                                                        >  2:4584681/1‑140 (MQ=255)

                                                   aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                        >  1:951296/1‑140 (MQ=255)

                                                   aCTGGGGAAGCCGGACCAGCCGGAGAGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTCCCGGGGACGCCGGCCCAGCCGGAGCGACAgg                                                                                        >  1:1137325/1‑140 (MQ=255)

                                                     ccgcgcaGCCGCACCACCCGGAGCGACAGGAGCCACCGGCGACCCCGGCGCCGCCGGAGCCGCCGGAGCTCCCGGAGCTCCCGGAGCCACCGGAGCGACAGGGGCTACCGGGGCAGCCGGACCAGCCGGAGCGACAGGAg                                                                                      <  1:219764/134‑1 (MQ=9)

                                                        ggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGCACCCGGACCAGCCGCAGCGCCAGGAGcga                                                                                   >  1:1350998/1‑138 (MQ=14)

                                                            gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGCGCTACCgg                                                                               >  2:3688209/1‑140 (MQ=255)

                                                            gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCCGCCGGACCGACAGGAGCTACAgg                                                                               >  2:4079024/1‑140 (MQ=255)

                                                            gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGGCCCGCCGGAGCCACCGGAGCTACggg                                                                               >  2:2779377/1‑140 (MQ=14)

                                                            gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAACCCGGACCAGCCGGAGCGACCGGAGCTACCgg                                                                               >  2:1421724/1‑140 (MQ=255)

                                                             ccGGACCACCCGGCGCCCCAGGAGCAGCCGGAGCCCCCGGAGCACCCGGAGCGACCGGAGCTCCCGGTGAAGCCGGACCAACCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                              <  2:4852987/140‑1 (MQ=14)

                                                                 cccACCCGGAGCGACAGGCGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACACGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                          <  1:1085882/139‑1 (MQ=255)

                                                                 aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGATCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                          >  1:759057/1‑140 (MQ=255)

                                                                 aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGCGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGCCAGGAGCTACCGGGGCAg                                                                          >  2:2236103/1‑140 (MQ=255)

                                                                 aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAg                                                                          >  2:3768221/1‑140 (MQ=255)

                                                                 aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                          >  2:2384181/1‑140 (MQ=255)

                                                                 aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                          <  1:2576044/140‑1 (MQ=255)

                                                                 aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                          <  1:4076043/140‑1 (MQ=255)

                                                                 aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGGCGGAGCGCCAGGAGCGACCGGCGAGGCCGGAGCAGCCGGAGCTACAGGAGCCACCggagccg                                                                          >  2:1927366/1‑135 (MQ=11)

                                                                      ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                   <  1:2916657/110‑1 (MQ=40)

                                                                       cGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                    <  1:4838243/140‑1 (MQ=255)

                                                                          aGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGCCACCGGGGCACCCGGCCCAGCCGGACCCCCCGGAGCGACCGGCGAACCCGGACAAGCCGGACCGACCGGAGCGACCGGGGACGCCGGAGCac                                                                 >  1:4858587/1‑139 (MQ=2)

                                                                           gCGACAGGCGCTACCGGCGAAGCCGGACCCGCCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAc                                                                <  1:4575096/140‑1 (MQ=255)

                                                                            cGACAGGAGCTCCCGGGGATGCCGGTCCATCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                                                               <  1:4822711/140‑1 (MQ=14)

                                                                               cAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGa                                                            >  1:4250824/1‑140 (MQ=255)

                                                                               cAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACAGGGGAAGCCGGACCAACCGGa                                                            >  1:2874534/1‑140 (MQ=255)

                                                                                    gCTCCCGGGGAAGCCGGACCCGCCGGAGGGACAGGCGCTCCGGGGCAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                       <  1:609052/140‑1 (MQ=11)

                                                                                    gCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGAACCAGGCCCAGCCGGAGCGACAGGAGCAACGGCGGAAACAGGCACAGCCGCAGCGAc                                                       >  2:1550876/1‑140 (MQ=11)

                                                                                    cccaCCGGCGCAGCCGGACCATCCGGAGCCCCAGGAGCTACCGGGCAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                       <  1:4191091/137‑1 (MQ=14)

                                                                                        ccGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGCCGCCGGACCAGCCGGAGCTGCAGGAGCAACCGGGGACGCCGGAGCAAACGGAGctcgggga                                                   >  2:36619/1‑133 (MQ=14)

                                                                                             gcacccGGACCAGCCGGAGCTACAGGAGCTACCGGTGAATCCGGACCAACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCTGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                              <  2:3530972/136‑1 (MQ=14)

                                                                                             gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCcac                                              >  1:831362/1‑140 (MQ=255)

                                                                                             gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                              >  1:4659351/1‑140 (MQ=255)

                                                                                             gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                              >  1:2142236/1‑140 (MQ=255)

                                                                                             gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACAAGACGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcag                                              >  2:4655481/1‑139 (MQ=255)

                                                                                              acgCCGGACCAGCCGGCGCGACAGGAGCTAGGGGGTAAGCCGGACCCACCGGTGCGAGAGGTGCTACCGGGGAAGCCGGCGCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                             <  1:1869061/138‑1 (MQ=14)

                                                                                              aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                             <  1:4260566/140‑1 (MQ=255)

                                                                                               acccGGCCCAGCCGGACCCCCAGCAGCCCCCGGCGAAGCCGCACCAACCGGAGCGAAACGAGCTACCGGCGAAGCCTGTGGTGCGGGATCTTGTGTATATCCCGGCGAAGCCGGACCAACCGGAGCGACGGGAGCCACAg                                            <  1:2398214/138‑1 (MQ=9)

                                                                                               aGCCGGACCAGCCGGAGCGACCGGAGCTCCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAg                                            <  1:2983509/140‑1 (MQ=255)

                                                                                               aGCCGGACCAGCCGGAGCCACCGGAGCTACCGGCGAAGCCGGACCAACCGGAGCCACAGGAGCAACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAg                                            <  1:394001/140‑1 (MQ=14)

                                                                                                gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                           >  2:3126558/1‑140 (MQ=255)

                                                                                                cccGGACCAGCCGGACCGCCTGGAGCTAACGGGGAAGCCGGAACATCCTGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                           <  1:1038704/139‑1 (MQ=14)

                                                                                                 ccGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGGAGCCGGACCCGCCGGCGCGACAGGAGCGACCGGGGGTGGCGGACCCAGCGGCGCGGCGGGGGCCACAggg                                          >  2:762642/1‑140 (MQ=14)

                                                                                                  cGGACCAGCCGGAGCGCCCGGCGCGACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGCCGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACGAACCGGAGCGACGGGAGCCACAgggg                                         <  2:1137325/140‑1 (MQ=14)

                                                                                                  cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                        >  1:599248/1‑93 (MQ=37)

                                                                                                  cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg                                         <  1:1176858/140‑1 (MQ=255)

                                                                                                     aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                           >  1:280002/1‑87 (MQ=38)

                                                                                                     aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                           <  2:280002/87‑1 (MQ=38)

                                                                                                          ccGGCGCGACAGGACCTACCGGCGCAGCCGGACCCCCCGGCGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTggg                                 <  2:4783464/140‑1 (MQ=17)

                                                                                                              aGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACg                             <  1:1702082/140‑1 (MQ=255)

                                                                                                              aGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACg                             <  1:3888896/140‑1 (MQ=255)

                                                                                                              aGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGCGCCCCAGGACCAACAGCAGCGCCGGGAGCCACAGCCGCGACTgtatacg                             >  2:3792476/1‑134 (MQ=14)

                                                                                                                   cAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGCAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCACCTGGGGACGTCGGa                        >  2:525730/1‑140 (MQ=255)

                                                                                                                   cAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGGGCAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTTCTGGGGACGTCGGa                        >  2:2956085/1‑140 (MQ=255)

                                                                                                                    aGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACAGGAGCTACCGGCGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGAc                       <  1:1629848/140‑1 (MQ=255)

                                                                                                                    aGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTCCCGGGGACGCCGGACCACCCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGAc                       >  1:2685864/1‑140 (MQ=255)

                                                                                                                        gCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGAGCGGAGCAACCGGGGCGGCCGGACCAACCGGACCGGCGGGAGCGACCGGGGCGTGGGGGGACGTCGGagcagc                   >  2:4519656/1‑140 (MQ=14)

                                                                                                                        gCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGc                   <  2:2142236/140‑1 (MQ=255)

                                                                                                                         cTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGcc                  >  1:3261327/1‑140 (MQ=255)

                                                                                                                           aCCGGGGCACCCCGACCAACCGGAGCGACAGGCGCTACCGGGGCAGCCGGACCATCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg                <  1:3321630/140‑1 (MQ=18)

                                                                                                                           aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGCGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGAAGTCGGACCAGCCgg                >  2:705977/1‑140 (MQ=255)

                                                                                                                                accaaccGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGa           >  1:4914637/6‑140 (MQ=11)

                                                                                                                                 gAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGTGAAGCCGGACCAACCGGAGCGACGGGAGCCACTGGGGCGACTGGGGACGTCGGACCAGCCGGAGCGAc          >  1:402315/1‑140 (MQ=255)

                                                                                                                                 gAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGCGAAGCCGGACCAACCGGAGCGCCGGGAGCCACAGGGGCTCCAGGGGCCGACGTACCAGCCGCAGCGAc          >  2:3245290/1‑140 (MQ=17)

                                                                                                                                 ccaaccGGACCCACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGCCGGAGCGAc          <  2:1882460/136‑1 (MQ=255)

                                                                                                                                    gCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACCGGGGCTACAGGGCCCGTCGGACCAGCCGGAGCGACAgg       >  1:4370099/1‑140 (MQ=255)

                                                                                                                                    gCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAgg       >  1:2359937/1‑140 (MQ=255)

                                                                                                                                    gCCGGACCAACCGGAGCGACAGGAGCAACCGGCGCCCCCGGCCCAGGCGCAGCGTCCGCAGCGACGGGGGAAGCAGTACCAGCCCACGCGACTGGTGCCACAGGGGCTAGAGGGCAAGTCGGACCAGCCGGAGCGACggg       >  1:1180121/1‑140 (MQ=255)

                                                                                                                                    cccgccccAACCCGAGCGACAGCAGCTACAGGGGCACCCGGACGATCCCGAGCGACAGGTGCTACCGGCGAAGCCGGACCATCACGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAgg       <  2:4033404/134‑1 (MQ=17)

                                                                                                                                    ccccgcccAACCGGCGCGCCAGCAGCCACCGGCGAAGCCGGACCAGCCGGAGCGCCCGGAGCTCCCGGGGCAGCCGGACCAACCGGAGCGACGGGAGCCACAGGCGCTACTGGGGACGTCGGACCAGCCGGAGCGACAgg       <  2:4087676/134‑1 (MQ=18)

                                                                                                                                     ccGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGa                                                                                       <  1:1300716/59‑1 (MQ=35)

                                                                                                                                      cGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCCAcagcag     >  2:1907386/1‑140 (MQ=14)

GGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTA  >  NZ_CP034943/607533‑607809

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`