| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,379,799 | T→G | 6.3% | K382T (AAG→ACG) | EO946_RS12160 ← | sigma‑54‑dependent Fis family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,379,799 | 0 | T | G | 6.3% | 578.0 / 3.1 | 231 | K382T (AAG→ACG) | EO946_RS12160 | sigma‑54‑dependent Fis family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (110/92); new base G (21/3); total (136/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.78e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 231 total aligned reads displayed.
AGGGCTGCACAGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGTTAAGCTCCGCTGTCAGCATTTTAATTTCGGACACATC > NZ_CP034943/2379664‑2379935 | aGGGCTGCACAGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTGGGTATTGATTGCATGGGCGAACAGTTGTTTTAATGTTACCGATTACCCGCGCCACAAAAAAGTTTCCGGTGTTTTAGCCCCGCGCGTCGc > 1:1842612/1‑140 (MQ=255)aGGGCTGCACAGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGGTGGGATGGGCGAACCGTTGTTTTCCTGTTGGCGATTCCCCGGGGCACCAAATCGTTGGCGGTGGTTTCGCCCCGCGCGTCgg > 1:4297921/1‑139 (MQ=255)aGGGCTGCACAGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGc < 1:3183513/140‑1 (MQ=255)aGGGCTGCACAGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGc < 1:1861407/140‑1 (MQ=255)aGGGCTGCACAGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGAGTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGc < 1:1040134/140‑1 (MQ=255)aGGGCTGCACAGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCGTTCGTTATGGATGGGATGGGCGCACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGGTTTCGCCCCGAGCGTCGc > 1:29741/1‑140 (MQ=255)aGGGCTGCACAGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCATTCGTTATGGATGGCAGGGGCGTACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGc < 1:4983207/140‑1 (MQ=255) gtgcagCACAGTTCACGCGAATAAATTTATTTAATTTAATTTATATTTCGTTATTGATTGCATGGGCGAACAGTTATTTTAAAGTTACCGATTACAAGCGCAACAAAATCGTTGCCCGTGTTTTAGACCCGAGCTTAGcc > 2:3227026/6‑140 (MQ=255) gggCTGCACAGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGcc > 2:3126796/1‑140 (MQ=255) ggCTGCACAGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCGTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCCGTGTTTTCGCCCCGAGCTTCGccg > 2:3107970/1‑139 (MQ=255) tGCACAGTTCACTCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGtt < 1:132283/140‑1 (MQ=255) tGCACAGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGtt < 1:519344/140‑1 (MQ=255) cacaGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTGGGTATTGATGGCAAGGGCGAACAGTTATTTTCCTGTTCCCGATTACCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCGTGGCCTGTTCa > 2:348966/1‑140 (MQ=255) cacaGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTGGGTATGGATGGGATGGGCGAAAAGTTGTTTTACTGTTGCCCATTCCCCGCGCAACAAAAACGTTTCCGGGGTTTTCGCCCCGAGCGTCGCCTGTTcc > 1:1738781/1‑139 (MQ=255) cacaGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACCGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTTCCGGTGTTTTAGCCCCGAGCTTCGCCTGTTCa > 2:4078498/1‑140 (MQ=255) cacaGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTGTTTTCCTGTTCCCGATTCCCCGCGCACCAAAATCGTTGCCGGTGTTTTCGCCCCGAGCGTCGGCTGTTCa > 2:3748269/1‑140 (MQ=255) cacaGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCa > 2:3860706/1‑140 (MQ=255) cacaGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCa > 2:4590943/1‑140 (MQ=255) gTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAgcg < 1:3424808/140‑1 (MQ=255) gTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAgcg < 1:4716388/140‑1 (MQ=255) ttCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTGGTTATGGATTGCATTGGCGAACAGTTGTTTTCCTGTTGCCGATTACCCCCGCAACAAAAAAGTTGCCGGTGTTTTAGCCCCGAGCGTCGCCTGTTAAAgcgc > 1:4328926/1‑140 (MQ=255) ttCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGTTTGCCTGGGCGCACAGTTCTTTTCCTGTTCCCCATTCCCCGCGCAACAAAATACTTGCCGGGGTTTTCGCCCCGAGCTTCGCCTCTTCAAgcgc > 2:2560559/1‑140 (MQ=255) ttCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGTTGGCATGGGCGAACAGTTCTTTTGCTGTTGCCGATTACCCGCGCAACAAAATCGTTGCCGGGGTTTTGGCCCCGAGCTTGGCCGGTTCAAacgc > 1:4040590/1‑140 (MQ=255) ttCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGCTGCCATGGGGGAACAGTTCTATTCGTGTTCCCGAATCCCCCCGCAACAAAAAAGTTGCCGGGGTTTTGGCCCCCAGCTTCGCCTTTTGaatccc > 2:2833765/1‑136 (MQ=255) ttCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATTGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTTCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAgcgc > 1:1160106/1‑140 (MQ=255) ttCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCCTGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACCAAATCGTTGCCGGGGTTTTCGCCCCGAGCTTCGCCTGTTCAAgcgc > 2:4546397/1‑140 (MQ=255) ttCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATTGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCCCGCAACAAAAAAGTTTGCGGTGTTTTCGGCCCGAGCGTCGCCTGTTGAAgcgc > 1:3365409/1‑140 (MQ=255) ttCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTAGCCCCGCGCTTCGCCTGTTCAAtcgc > 2:4188294/1‑140 (MQ=255) ttCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCATTTCCTGTTCCCGATTCCCCGCGCAACAAAAACGTTGGCGGTGTTTTCGCCCCGAGCTTAGCCTGGTCCAgcgc > 2:3051499/1‑140 (MQ=255) ttCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCAAGGGCGCACAGTTCTTTTGCGGTTGCCCATTCCCCGCGCCCCAAAATCGTTGCCGGGGTTTTCGCCCCGAGCTTCGCCTGTTCAAgcgc > 2:4022842/1‑140 (MQ=255) ttCACGCGAATAAATTTATTGTATTTCCGGTCGCGTTCGTTATGGCTGGCATGGGCGAACCGTTGTTTTCCTGGTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGGGTTTTCGCCCCGAGCGTCGCCTGTTCTAgcgc > 1:2966617/1‑140 (MQ=255) ttCACGCGAATAAATTGATTGTATTTCCGGTCGCTTTCGGTATGGATGGCATGGGCGCACCGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGGTTTCGCCCCGAGCTTCGCCTGTTCAAgcgc > 2:582867/1‑140 (MQ=255) tCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCa < 2:4269488/140‑1 (MQ=255) aCGAGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAAc < 2:689941/140‑1 (MQ=255) cgcgAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAAcc < 1:2579164/140‑1 (MQ=255) gcgAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTATTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCCCCTGTTCAAGCGCAACCa > 2:716519/1‑140 (MQ=255) gcgAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGGTCTTTTACTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCa > 2:4746660/1‑140 (MQ=255) gcgAATAAATTTATTGTATTTCCGGTCGCGTTCGTTATTGATGGCATGGGCGAACAGTTGTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCCGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCa > 1:316578/1‑140 (MQ=255) gcgAATAAATTTATTGTATTTCCGGTCGCGTTCGTTATTGATGGCATGGGCGAAAACTTGTTTTACTGTTCCCCATTACACGCGCAACAAAAAAGTTTCCCGTGTTTTGGCCCCGAGCGTTTCCCGTTCAAACGCAACCa > 1:4525991/1‑140 (MQ=255) cgAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAg < 1:1426232/140‑1 (MQ=255) aaTAAATTTATTGTATTTCCGGTCGCTTTGGTTATTGATGGCATGGGCGAACAGTTCTTTTGCTGTTGCCGATTCCCCCCGCACCAAAAACGTTTCCGGGGTTTTCGCCCCCAGCTTCGCCGGTTCAAGCGCAAccacca > 1:323416/1‑140 (MQ=255) tAACTTTATTGTATTTCCGGTCGCTTTGGTTATGGATGGCATTGGCGAACACTTGTTTTCCAGTTCCCGCTTCACCGCGCCACAAAATATTTGCCGGTGTTTTAGGCCCGAGCTTCGCATGTTAACGCGCAACCACCAtt > 1:551756/1‑140 (MQ=255) tAAATTTATTGTATTTCCGGTCGCTTTGGTTATTGATGGCATGGGCGAACACTTGTTTTGCAGGTGCCGAGTCCCCCCGGAACAAAATCGTTGCCGGTGTTTTGTCCCCGCGCTTCGCCTGTTCCAGCGCAACCCGCAtt > 1:225004/1‑140 (MQ=255) tAAATTTATTGTATTTCCGGTCGCTTTCGTTATTGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCAtt > 2:1171841/1‑140 (MQ=255) tAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATTGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCCACCAGCAtt > 1:1730301/1‑140 (MQ=255) tAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCCTGGGCGAACAGTTCTTTTACGGTTCCCCATTCCCCGCGCAACAAAATAGTTGCCGGTGTTTTCGCCCCGAGCTTCCCCGGTTCAAGCGCAAACCGCaat > 2:3192640/1‑138 (MQ=255) tAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATTGGCGAACAGGTATTTTACTGTTAACGATTACCCCCCCAACAAAAACGGTTCCGGTGTTTTGGCCCCCAGCTTGGCCGGTTAAAGCGCAAcccacagt > 1:37306/1‑134 (MQ=255) tAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCaat > 2:4827773/1‑138 (MQ=255) tAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCAtt > 2:1846838/1‑140 (MQ=255) tAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCAtt > 2:317827/1‑140 (MQ=255) tAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCAtt > 2:2594750/1‑140 (MQ=255) tAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCAtt > 2:254610/1‑140 (MQ=255) tAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCGGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGGGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCAtt > 2:279443/1‑140 (MQ=255) tAAATTTATTGTATTTCCGGTCGCGTTGGTTATTGATGGCATGGGCGAAAAGTTCTTTTCCTGGTGCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCCACCCTCGCCGGTTCAAGCGCAACCACCAtt > 1:860087/1‑140 (MQ=255) tAAATTTATTGTATTTCCGGTCGCGTTGGGTATTGATTGCATTGGCGAACAGTTATTTTCCTGTTCCCGATTACCCCCGCAACAAAATACTTGCCCGTGTTTTGGCCCCCAGCGTCGCCGGTTAAAGCGCAACCaagatt > 1:3543588/1‑135 (MQ=255) tAAATTTATTGTATTTCCGGTCGCGTTCGTTATGGATTGCAGGGGCGAACAGTTGGTTTCGTGTTTACGGTTCCCCCCGCAACAAAAACGTTGCCGGTGTTTTAGCCCCGAGCTTAGCCTGTTCAAGCGCAACCACCAtt > 1:1957656/1‑140 (MQ=255) tCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAAt < 1:3071608/140‑1 (MQ=255) ttCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATgtcgt < 1:4908541/140‑1 (MQ=255) ttCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATgtcgt < 1:3949888/140‑1 (MQ=255) cGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCa < 1:4170535/140‑1 (MQ=255) tATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAAc < 1:3227026/140‑1 (MQ=255) tggatggCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCCTTTGCTCGCTTTTGCCGATAATGTCGTCAAACgt > 2:135964/1‑140 (MQ=255) gatggCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACgtgt > 2:3458426/1‑140 (MQ=255) ggCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTAtt < 1:3669645/140‑1 (MQ=255) ggCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTAtt < 1:2481833/140‑1 (MQ=255) gggCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCt > 1:2442998/1‑140 (MQ=255) ggCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCtt > 1:2422593/1‑140 (MQ=255) gCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTc > 2:2339317/1‑140 (MQ=255) gCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTc > 2:1287697/1‑140 (MQ=255) gCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTc > 2:1106099/1‑140 (MQ=255) aaCAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAg < 2:174557/140‑1 (MQ=255) aaCAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAg < 2:160485/140‑1 (MQ=255) aaCAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAg < 2:1116377/140‑1 (MQ=255) cAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCg > 1:3490966/1‑140 (MQ=255) tCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCg < 2:228100/140‑1 (MQ=255) cTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCACCCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGAtt > 2:189102/1‑140 (MQ=255) cTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGAtt > 2:3371497/1‑140 (MQ=255) gTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCa < 2:4172223/105‑1 (MQ=255) gTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCa > 1:4172224/1‑105 (MQ=255) gTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTg > 1:2158051/1‑140 (MQ=255) gTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATGTTGCTTCAAGCGTCCGAATGATTTg > 2:4090523/1‑140 (MQ=255) agtCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTAGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGgcg < 2:4119973/138‑1 (MQ=255) aTTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGgcg < 2:485339/140‑1 (MQ=255) aTTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGgcg < 2:1946116/140‑1 (MQ=255) cccGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCt > 2:44790/1‑71 (MQ=255) cccGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGt < 2:3008398/140‑1 (MQ=255) cccGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGt > 2:1498781/1‑140 (MQ=255) cgcgCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGTTa > 2:17113/1‑140 (MQ=255) gcgcAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGTTaa > 1:2693874/1‑140 (MQ=255) aacaaAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGTTAAGCTc > 1:2762615/1‑140 (MQ=255) cGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGTTAAGCTCCGCTGTCAGCAttt < 1:4188294/140‑1 (MQ=255) ttCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGTTAAGCTCCGCTGTCAGCATTTTAATTTc > 1:3499618/1‑140 (MQ=255) cGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGTTAAGCTCCGCTGTCAGCATTTTAATTTCgg < 2:2717777/140‑1 (MQ=255) ccccGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGTTAAGCTCCGCTGTCAGCATTTTAATTTCGGac < 2:2158051/140‑1 (MQ=255) cccGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGTTAAGCTCCGCTGTCAGCATTTTAATTTCGGaca < 2:3704400/140‑1 (MQ=255) cccGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGTTAAGCTCCGCTGTCAGCATTTTAATTTCGGaca < 1:3956167/140‑1 (MQ=255) cGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGTTAAGCTCCGCTGTCAGCATTTTAATTTCGGAcaca < 1:3860706/140‑1 (MQ=255) cGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGTTAAGCTCCGCTGTCAGCATTTTAATTTCGGAcaca < 1:4590943/140‑1 (MQ=255) cGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGTTAAGCTCCGCTGTCAGCATTTTAATTTCGGAcaca < 1:44358/140‑1 (MQ=255) aGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGTTAAGCTCCGCTGTCAGCATTTTAATTTCGGACACATc < 1:17113/140‑1 (MQ=255) | AGGGCTGCACAGTTCACGCGAATAAATTTATTGTATTTCCGGTCGCTTTCGTTATGGATGGCATGGGCGAACAGTTCTTTTCCTGTTCCCGATTCCCCGCGCAACAAAATCGTTGCCGGTGTTTTCGCCCCGAGCTTCGCCTGTTCAAGCGCAACCAGCATTTGCTCGCTTTTGCCGATAATGTCGTCAAACGTGTATTTTGCTTCAAGCGTCCGAATGATTTGCCTGGCGCGGTTAAGCTCCGCTGTCAGCATTTTAATTTCGGACACATC > NZ_CP034943/2379664‑2379935 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |