| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,584,300 | G→C | 7.0% | Q327H (CAG→CAC) | EO946_RS18420 → | N‑acetylneuraminate synthase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,584,300 | 0 | G | C | 7.0% | 1107.8 / 10.6 | 437 | Q327H (CAG→CAC) | EO946_RS18420 | N‑acetylneuraminate synthase family protein |
| Reads supporting (aligned to +/- strand): ref base G (174/219); new base C (3/38); total (178/259) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.09e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 461 total aligned reads displayed.
ACCAGAATATAAAAAAAGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCC > NZ_CP034943/3584161‑3584439 | aCCAGAATATAAAAAAAGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATTCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAg < 2:4734007/140‑1 (MQ=255)aCCAGAATATAAAAAAAGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAg < 2:4207125/140‑1 (MQ=255) aaaaaGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACAccc < 2:3327827/140‑1 (MQ=255) aaGCAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAAc < 1:2563153/140‑1 (MQ=255) tGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAACAAGTCTAAGa < 2:4691826/140‑1 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAACTGAGAATGGATTAATGCCTTTACAATCCGAGCACGCATATCATCAAGTAGCAACTGATGATTTATCGTTAAACCAGCCCATGACAACCAACGAAATAAAAAGTCAAAGAAt > 2:2763518/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 1:738439/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 2:2080442/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 2:1093958/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 1:2467974/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 1:2148113/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 2:4932221/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATGTATCGTTAAACCAGCCCATTACACCCAACGAAATCAAAAGTCTAAGAAt > 1:2813833/1‑140 (MQ=255) aaCAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGa > 1:100827/1‑140 (MQ=255) aaCAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGa > 2:3724128/1‑140 (MQ=255) aaCAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGa > 2:238467/1‑140 (MQ=255) aaGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTg < 1:1803119/140‑1 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa < 1:3724128/140‑1 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 2:2113752/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:3224687/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 2:1044692/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:4074667/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:4098070/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:4405302/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:4522791/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:630206/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:2904730/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:2349381/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:1646990/1‑140 (MQ=255) tCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGt < 1:143039/140‑1 (MQ=255) tCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGt < 1:3942082/140‑1 (MQ=255) ccAACAGAGGCGCAAATGAGAATGCATTACTGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCGCATTACACCCAACGAAAGAAAAAGTCTAAGAATTGCGATTGCAGTg < 2:4037825/140‑1 (MQ=255) ccAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTg < 1:1093958/140‑1 (MQ=255) ccAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTg < 1:17095/140‑1 (MQ=255) aaaaGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCAGTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGat > 2:465307/1‑140 (MQ=255) aGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATg < 1:191489/140‑1 (MQ=255) gCGGAAATGAGAATGCATTAATGCCTTTGCAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCACACATATGTAgg > 1:3281672/1‑140 (MQ=255) gCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAgg > 1:2950528/1‑140 (MQ=255) gCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAgg > 1:1886711/1‑140 (MQ=255) gCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAAACACCCCAATACACCCAACGAAATAAAAAGTCAAAGAATTCCGATTGCACTGATATGTAgc > 2:4278649/1‑139 (MQ=255) tttACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTCAACTGATATGTAGGAAAAAATCTACTAGTCTGCaaaaaa > 2:2928383/1‑140 (MQ=255) ttACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCTTCTGCCGaaaaa > 2:2631751/1‑140 (MQ=255) ttACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGaaaaa > 2:1827373/1‑140 (MQ=255) ttACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGaaaaa > 1:4637548/1‑140 (MQ=255) aaGCCGAGGACGCTTTTCCTAAAGTAGAAACTGATTTTTTATCGTTAAACCAGCCCTTTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTTGGCTAAAATCGACTCGTCTGCCGAAAAAAgcg < 1:1150434/140‑1 (MQ=255) aaGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTTATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAgcg < 2:3903195/140‑1 (MQ=255) ccGAGGACGCATTTCCTCAAGTAGCAACTGCTTATTTATCTTTAAACCAGCCCATTACACCCAACGAAATAAAATGTCTAAGAATTGCGATTGAAGTGATATGTAGGCTAAACTCGACTCGTCTGCCGAAAAAAGCgctg < 2:1733158/140‑1 (MQ=255) ccGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCACCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCgctg < 1:3625553/140‑1 (MQ=255) ccGAGCACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACCAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCgctg < 2:1301378/140‑1 (MQ=255) cGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCgctgc > 2:1126458/1‑140 (MQ=255) agtaCGAATTTCCTCTAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAATAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTc < 2:1404722/137‑1 (MQ=255) agcaCGCATTTCCTAAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAATAATTGCGATTGCAGTTATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTc < 2:4463542/137‑1 (MQ=255) aGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGAAGTGATATGTAGGATAAAATCTACTAGTCTGACGAAAAAAGCGCTGCTc > 2:2572271/1‑140 (MQ=255) ggACGCATTTCCTCAAGTAGCAACTGCTGTTTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAACAGTCTAAGAATTGCTATTGCAGTGATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTcc < 2:205805/140‑1 (MQ=255) ggACGCATTTCCGAAAGTAGCAACTGCTGATTTATCGTTAAACCACCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTTATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTcc < 2:1460565/140‑1 (MQ=255) actcATTTACTCACTTAGCAACTGCTTATTTTTCGTTAAACCAGCCCATTACACCCAACGAATTAAAAAGTCTAAGAATTGCTATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCt < 2:3032158/137‑1 (MQ=255) taaTTTCCTAAAGTACCAACTGATGATTTATCTTTAAACCACCCCATTACACCAAACGAAATAAAAAGTCTAATAATTGCGTTTTCATTTATATGTAGGATAAAATCGACTCGTCTACCGAAAAAAGCGCTGCTCCCTAt < 1:1281064/138‑1 (MQ=255) gaaTTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAt < 2:2549816/138‑1 (MQ=255) gaaTTTCCTAAAGTAGCATCTGCTTATTTATCTTTAAACCAGCCCATTACACCCAACCAAATAAAAAGTGTAAGAATTGCGATTGCTGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAt < 1:1525840/138‑1 (MQ=255) gCATTTCCTCAAGGAGCAACTGCTTATTTATCGTTAAACCCGCCCATTACACCCAACGAAATAAAAAGTGTACGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAt < 2:3104319/140‑1 (MQ=255) cATTTCCTCAAGTAGCAACTGCTGATTTATCTTTAAACCCGCCCATTACACCCACCGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAtt < 1:1047269/140‑1 (MQ=255) cATTTCCTCAAGTACAAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAtt < 2:3581600/140‑1 (MQ=255) attttCATCAATTAGAAACTGCTTATTTATCGTTAAACCAGCCAATTACACCCAACGAAAAAAAAAGTCTAAGAATTGCGTTTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAtt < 1:2998897/138‑1 (MQ=255) tttCCTCATGTAGCAACTGCTTATTTATCGTTAAACCAGCCAATTACACCCAACTAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATTTGTTGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTa < 2:575760/140‑1 (MQ=255) tttCCTAAATTAGCAAGTGCTGATTTATCTTTAAACCAGCCAATTACACCAAACTAAATAAAAAGTCTAAGAATTGCGTTTGCAGTTATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTa < 2:697859/140‑1 (MQ=255) tttCCTAAATTAGAAATTTTTTATTTATCTTTAAACCAGCCAATTACACCCAACTAAATAAAAAGTATAAGATTTGCGTTTGCAGTGATTTGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTa < 1:2695724/140‑1 (MQ=255) tttCATAAATTAGAAAGTGCTTATTTATCTTTAAACCAGCCCATTACACCAAACGAAATAAAAAGTCTAATAATTGCTTTTGCAGTTATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTa < 1:3113099/140‑1 (MQ=255) ttCCTCAAGTAGCAACTGCTTATTTAACTTTAAACCACCCAATTACCCCCAACGAAATAAAAAGTCTAAGAATGGGTATTGCTGTGATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAc < 1:3357554/140‑1 (MQ=255) ttCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCCCCCCATTACACCCAACCAAATAAAACGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAc < 1:4781660/140‑1 (MQ=255) ttCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAc < 2:3669927/140‑1 (MQ=255) ttCCTCAAGGAGAAAGTGCTGATTTATCTTTAAACCCGCCAATTACACCCAACGAAAAAAAAAGACTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAc < 1:4587358/140‑1 (MQ=255) ttCCTAAAGTAGCAACTGCTGATTTATCTTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGATAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAc < 1:3659143/140‑1 (MQ=255) ttCATCAAGTAGCAACTGGTGATTTATCGTTAAACCAGCCAATTACCCCCACCGAAATAAAAAGTCTACGAATTGCGATTGCAGTGATATGTAGGATAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAc < 1:4858614/140‑1 (MQ=255) cTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGACTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGt < 2:2467974/140‑1 (MQ=255) aaGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGtata > 2:89342/1‑140 (MQ=255) gagacagctgcttATTTATCGTTAAACCCGCCAATTACACCAAACGAAATAAAAAGTATAAGAATTGCGATTGCAGTCATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATAcc < 2:18487/133‑1 (MQ=255) gTAGCAACTGCTGATTTATCGTTAAACCCCCCCATTACACCCAACTAAATAAAAAGTCTAAGAATTGCGATTGAAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATAcc < 2:3403464/140‑1 (MQ=255) aGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCAt < 2:4091057/140‑1 (MQ=255) cAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATg < 2:4829601/79‑1 (MQ=255) cAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCt > 2:780058/1‑140 (MQ=255) aCTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGt > 1:920307/1‑140 (MQ=255) aCTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAAGGTATACCATCTGt > 2:2207114/1‑140 (MQ=255) ctgATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGaa > 2:3129400/1‑140 (MQ=255) ctgATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGaa < 2:3176899/140‑1 (MQ=255) tgtttttTCGTTAAACCCGCCCATTACACCAAACGAAATAAAATGTATAAGACTTGGCATTGATTTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAAc < 1:3159224/137‑1 (MQ=255) tgATTTATCGTTAAACCCGCCCATTACACCCACCGAAATAAAAAGTCTACGAAGTGCGATTGCAGTGAAAGGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAAc < 1:863611/140‑1 (MQ=255) tgATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATGGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAAc < 1:2080442/140‑1 (MQ=255) tgATTTATCGTTAAACCAGCCCATTACACCCAACCAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAAc < 1:2005471/140‑1 (MQ=255) taTTTATCTTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACg < 2:2278120/139‑1 (MQ=255) gATTTATCGTTAAACCAGCACATTACCCCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGATAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACg < 2:1202435/140‑1 (MQ=255) tttATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCt < 2:4405302/140‑1 (MQ=255) tATCGTTAAACCAGCCCATTCCACCAAACCAAATAAAAAGTATACGATTTGCGATTGCAGTCATATTTAGCCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTGACGGTATACCATCTGTTGAACGCTGt < 2:1568890/140‑1 (MQ=255) tATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGAAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGt < 1:2586496/140‑1 (MQ=255) tctttAAACCAGCCAATTACACCAAAACAAATAAAAAGTATAAGATTTGCTTTTTCAGTTATTTTTAGTCTAAAATCGACTCGTCTTCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGttt < 2:1696332/137‑1 (MQ=255) tCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATAcc > 1:4264914/1‑122 (MQ=255) tCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGttt > 1:3081345/1‑140 (MQ=255) tAAACCACCCCATTACACCCACCGAAATAAAAAGTATAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATc < 1:3997134/140‑1 (MQ=255) aaaCCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTCTTTACGGTATACCATCTGATGAACGCTGTTTAATCa > 2:853709/1‑140 (MQ=255) gCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGcc > 2:1907981/1‑140 (MQ=255) gCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTAAACCATATGTTGAACGCTGTTTAATCAATTgac > 2:2857068/1‑138 (MQ=255) | ACCAGAATATAAAAAAAGGAGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCC > NZ_CP034943/3584161‑3584439 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |