| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,584,316 | G→C | 5.6% | E333Q (GAA→CAA) | EO946_RS18420 → | N‑acetylneuraminate synthase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,584,316 | 0 | G | C | 5.6% | 1271.1 / 8.5 | 532 | E333Q (GAA→CAA) | EO946_RS18420 | N‑acetylneuraminate synthase family protein |
| Reads supporting (aligned to +/- strand): ref base G (236/229); new base C (3/38); total (241/291) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.33e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 532 total aligned reads displayed.
AGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCTGGTG > NZ_CP034943/3584180‑3584454 | aaTAAAACAAGCTCCAAAAGATTAGTAAAAGAGAATTCATAAATGCCTTTACAAGCAGAGCACGCATTTACTCAAGTAGCAACTGCTGAATTATCGTAAAACAACCACATTACACCCAACCAAATAAAAATTCTAAGAAt > 2:2331802/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAACTGAGAATGGATTAATGCCTTTACAATCCGAGCACGCATATCATCAAGTAGCAACTGATGATTTATCGTTAAACCAGCCCATGACAACCAACGAAATAAAAAGTCAAAGAAt > 2:2763518/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTTATTTATCGTTAAACCAGCCCATTACACCCAACGAAATaaa < 1:1050524/128‑1 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTaataat > 1:2502550/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt < 2:413858/140‑1 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 2:3610157/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 2:2005471/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 2:1093958/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACACAACGAAATAAAAAGTCTAAGAAt > 2:647939/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGAGTCCTACATGAGACAGCATTAATGCATATACAACCCCAGGACGCATAAACTCAAGAAGAAACTGCTGATATATCGTTAAACCATACAAATACAACCAAAGAAATAAAAAAACTATGAAt > 2:4675501/1‑140 (MQ=255) aaCAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGa > 1:1368418/1‑140 (MQ=255) aaCAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGa > 1:3114722/1‑140 (MQ=255) aaCAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGa > 1:100827/1‑140 (MQ=255) caGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATACAAAGTCTAAGAATTGCGATTg < 1:3084928/139‑1 (MQ=255) aaGCTCCAAAAGCGGCGGAAATGAGAATGCAATAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTg < 1:82431/140‑1 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGACATAAAAAGTCTAAGAATTGCGATTGCa < 1:1781084/140‑1 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 2:1581911/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:630206/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa < 2:881350/140‑1 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:4460014/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:4074667/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa < 1:3724128/140‑1 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 2:4587028/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:2927120/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:1863322/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAAGGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAATGCGATTgaa > 1:2178867/1‑138 (MQ=255) tCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGt < 1:3942082/140‑1 (MQ=255) tCCAAAAGATGCGGAAATGAGAATGCATTAATGCCATTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGt < 1:4779129/140‑1 (MQ=255) ccAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTg < 1:3625417/140‑1 (MQ=255) aaaaGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGat > 2:2695724/1‑140 (MQ=255) aaaaGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGat > 2:4797378/1‑140 (MQ=255) gCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAgg > 1:4347640/1‑140 (MQ=255) aTGCATTTACAACCCGCGGCCGCATTTCCTCAATTCCCAACGGGTTATTTATCGTAAAACCACCCAATTACACCCAACCAAATAAAAAGTCTAAGAATTGCGATTCCAGTTATATGTAGGCTAAAATCGACTCGTCTGcc < 1:4023488/140‑1 (MQ=255) tttACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTCAACTGATATGTAGGAAAAAATCTACTAGTCTGCaaaaaa > 2:2928383/1‑140 (MQ=255) ttACAGGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATTTATGCTAAAATCGACTCGTCTGCCGaaaaa > 2:3958756/1‑140 (MQ=255) ccGAGCACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACCAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCgctg < 2:1301378/140‑1 (MQ=255) cGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCgctgc > 2:1126458/1‑140 (MQ=255) agcaCGCATTTCCTAAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAATAATTGCGATTGCAGTTATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTc < 2:4463542/137‑1 (MQ=255) aGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGAAGTGATATGTAGGATAAAATCTACTAGTCTGACGAAAAAAGCGCTGCTc > 2:2572271/1‑140 (MQ=255) aGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTCCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAATCGCTGCTc > 2:2109944/1‑140 (MQ=255) ggACGAATTTCCACAATTAGAAACTGCTGATTTATCTTTAAACAAGCCATTTACCCCCAACCAAAAAAAAAGTCTAACAATTGCGATTGCAGTGTTATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTcc < 1:2422045/140‑1 (MQ=255) actcATTTACTCACTTAGCAACTGCTTATTTTTCGTTAAACCAGCCCATTACACCCAACGAATTAAAAAGTCTAAGAATTGCTATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCt < 2:3032158/137‑1 (MQ=255) gaaTTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAt < 2:2549816/138‑1 (MQ=255) gaaTTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAt < 2:765187/138‑1 (MQ=255) gCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAACTAAAAAGTCTAAGAATTGCGATTCCAGTTATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAt < 2:2072828/140‑1 (MQ=255) gCATTTCCTCAAGTAGAAACTGCTTTTTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCTGTGATATGTTGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAt < 2:489987/140‑1 (MQ=255) gCATTTCATCAATTAGCATCTTTTTATTTATCGTTAAACCAGCCCATTCCACCAAACGAAATAAAAAGTCTAATATTTGCGATGGCTTTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAt < 1:197487/140‑1 (MQ=255) ccagttCCTCAAGTAGCAACTGCTCATTTATCTTTAAACCCCCCAATTCCACCCAACGACAGAAAACTTCTAATAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAt < 1:2826938/136‑1 (MQ=255) tttCCTCATGTAGCAACTGCTTATTTATCGTTAAACCAGCCAATTACACCCAACTAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATTTGTTGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTa < 2:575760/140‑1 (MQ=255) tttCCTCAATTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACTAAATAAAACTTCTAATAATTGCGATTGAAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTa < 2:4714159/140‑1 (MQ=255) tttCCTCAATTAGCAACTGATGATTTATCGTTAAACCAGCCCTTTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATAGGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTa < 2:3673444/140‑1 (MQ=255) tttCCTCAAGTAGAAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCTATTGCAGTGATATGTAGGCTAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTa < 1:1502514/140‑1 (MQ=255) tttCCTAAATTAGAAATTTTTTATTTATCTTTAAACCAGCCAATTACACCCAACTAAATAAAAAGTATAAGATTTGCGTTTGCAGTGATTTGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTa < 1:2695724/140‑1 (MQ=255) ttCCTAAAGTAGCAACGGCTGATTTATCTTTAAACCCGCCCATCACACCCACGGAAATAAAAAGTCTACGAATGGCGTTTGCAGTGATATGTAGGCTAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAc < 1:1912306/140‑1 (MQ=255) ttCATCAAGTAGCAACTGGTGATTTATCGTTAAACCAGCCAATTACCCCCACCGAAATAAAAAGTCTACGAATTGCGATTGCAGTGATATGTAGGATAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAc < 1:4858614/140‑1 (MQ=255) tCCTCAAGTAGCAACTGGTTATTTATCTTTAAACCACCCAATTACACCCACCGAAATAAAAAGTCTAAGAATTGCGTTTGCAGTTATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACg < 2:4423074/140‑1 (MQ=255) tCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCACCCCATTACACCCACCCAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACg < 2:1719797/140‑1 (MQ=255) cAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGtat < 2:1410470/140‑1 (MQ=255) cAAGTAGAAACTGCTGATTTATCGTTAAACCAGCCCATTACCCCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAACTCGACTCGTCTGCCGAAAAAAGCGCGGCTCCCTATTTACGGtat < 1:1196485/140‑1 (MQ=255) gTAGCAACTGCTGATTTATCGTTAAACCCCCCCATTACACCCAACTAAATAAAAAGTCTAAGAATTGCGATTGAAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATAcc < 2:3403464/140‑1 (MQ=255) gTAGCAACTGCTGATTTATCGTTAAACCCCCCCATAACACCCAACGAAATAAAACGTCTAATAATTGCGTTTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATAcc < 1:3272447/140‑1 (MQ=255) gTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGt > 1:2986386/1‑135 (MQ=255) gTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGt < 2:3109629/135‑1 (MQ=255) aGCAACTGATCTTTTATCGATAAACCCCCCCATTACACCCAACCAAATAAAAAGAATAATAATTGCTTTTGCAGTGTTATGTAGGATAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCAt < 1:4139954/140‑1 (MQ=255) cAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCt > 2:3151849/1‑140 (MQ=255) aaCTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTg > 2:1795582/1‑140 (MQ=255) aCTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGt > 1:920307/1‑140 (MQ=255) cttaTTTATCTTTAAACCACCCCATAACACCCAACCAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGaa < 1:716483/137‑1 (MQ=255) cttaTTTATCGTTAAACCAGCCCATCACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGaa < 1:1098894/137‑1 (MQ=255) ctgATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGaa > 2:1842992/1‑140 (MQ=255) ttaTTTATCGTTAACCCCGCCCATTACCCCCAACTAAATAAAAAGACTAATAATTGCGATTGCATGGATAGGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAAc < 1:3170634/138‑1 (MQ=255) tgATTTATCGTTAAACCCGCCCATTACACCCACCGAAATAAAAAGTCTACGAAGTGCGATTGCAGTGAAAGGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAAc < 1:863611/140‑1 (MQ=255) tgATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATGGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAAc < 1:2080442/140‑1 (MQ=255) gATTTATCGTTAAACCAGCACATTACCCCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGATAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACg < 2:1202435/140‑1 (MQ=255) tATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGAAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGt < 1:2586496/140‑1 (MQ=255) tCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTcc < 2:1498639/106‑1 (MQ=255) tCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATAcc > 1:4264914/1‑122 (MQ=255) tAAACCAGCCAATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATc < 1:4560253/140‑1 (MQ=255) aaaCCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTCTTTACGGTATACCATCTGATGAACGCTGTTTAATCa > 2:853709/1‑140 (MQ=255) aGCCCTTTACCCCCAACCAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGc < 2:2163073/140‑1 (MQ=255) gCCCATTACACCCCACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTccc > 2:4058418/1‑140 (MQ=255) gCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTAAACCATATGTTGAACGCTGTTTAATCAATTgac > 2:2857068/1‑138 (MQ=255) cATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCTGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTgg < 2:3829317/140‑1 (MQ=255) atgccacCCCACGAACTAAAAAGTCTAACAATTGCGATTGCAGTTATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGc < 2:3196381/136‑1 (MQ=255) aTTACACCAAACTAAATAACAAGTCTACGAATTGCGATTGCAGTTATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGc < 2:1873008/140‑1 (MQ=255) ttACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAtt > 2:4248287/1‑95 (MQ=255) tACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTg > 2:244748/1‑140 (MQ=255) tACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATAAATTGCCTGGCTg > 2:1043235/1‑140 (MQ=255) ccAACGAAATAAAAAGTCTAAGAATTGCGATTGCTGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATAcc < 1:3351092/100‑1 (MQ=255) ccAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATAcc > 2:3351092/1‑100 (MQ=255) ccAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCt > 1:1611072/1‑140 (MQ=255) ccAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCt > 1:4594353/1‑140 (MQ=255) ccAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATGTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCt > 1:2120416/1‑140 (MQ=255) ccAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACACGTCAGCCGAAAAAAGCGCTGCTCCCTAATTACGGTATACCATCTGTTTAACTCTGTTTAATCAATTGCCTGGCTGTCCCt > 1:3662002/1‑140 (MQ=255) aaCGAAATAAAAAGTCTCAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTGACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCTgg > 1:3223740/1‑140 (MQ=255) aaCGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCTgg > 1:1458460/1‑140 (MQ=255) aaCGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCTgg > 1:2737879/1‑140 (MQ=255) aCGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTCTTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCTGgt > 2:2253924/1‑140 (MQ=255) aCGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCTGgt > 1:4635075/1‑140 (MQ=255) cGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCTGgtg > 1:1693189/1‑140 (MQ=255) | AGAAATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCTGGTG > NZ_CP034943/3584180‑3584454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |