| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,996,857 | C→A | 7.1% | intergenic (‑163/+43) | purA ← / ← EO946_RS20530 | adenylosuccinate synthase/VOC family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,996,857 | 0 | C | A | 7.1% | 651.0 / 5.1 | 256 | intergenic (‑163/+43) | purA/EO946_RS20530 | adenylosuccinate synthase/VOC family protein |
| Reads supporting (aligned to +/- strand): ref base C (125/101); new base A (2/27); total (127/129) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.30e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 273 total aligned reads displayed.
TCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTTCTC > NZ_CP034943/3996718‑3996995 | tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:4229095/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:2231705/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 1:4654305/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 1:4400027/1‑140 (MQ=255) cGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTaaaaa > 1:1320099/1‑140 (MQ=255) cGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTaaaaa > 1:4466557/1‑140 (MQ=255) ttCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCt > 2:2357003/1‑140 (MQ=255) ttCAAACAAATCAAGTTTATCATTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 2:4659276/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:1670731/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 2:253728/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 2:11687/140‑1 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 1:40659/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 1:3735822/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGGTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 2:2987711/1‑140 (MQ=255) caaTCAAGTTGATCAGAGAAGACACAGAAAGGCCATTGTAAATCAGACCAGTAAATTAATGTAAATCACTATTCGTTCGCTTCCATTAGTTTTACAAGCGTTTTCTCAACGCATTGTCCTAAAAAGCTCGTGAAACtttt < 1:3306495/139‑1 (MQ=255) aaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAATCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTa > 2:4047494/1‑140 (MQ=255) tCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTAGAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATc > 1:3630175/1‑140 (MQ=255) tCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATc > 2:569606/1‑140 (MQ=255) tCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATc > 2:201116/1‑140 (MQ=255) tCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATc > 2:1846888/1‑140 (MQ=255) tCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATc > 1:718551/1‑140 (MQ=255) tATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGc < 2:2448070/140‑1 (MQ=255) tCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCAc > 1:4445422/1‑140 (MQ=255) tCAGTGAAGAAACAGAAAGTCAAGTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTGCTCATCGCATTGTCATAACAAGCGGGTGAAACATTTATCCtgactcac > 2:2928114/1‑133 (MQ=255) tGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaa < 1:2725649/140‑1 (MQ=255) tGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaa > 1:435754/1‑140 (MQ=255) aagaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAATCGTTTTCTCATCGCATTGTCCTAAAAATCTCGTGAAAATTTTATCCTTTAGCACGaaaaa > 2:3459952/1‑140 (MQ=255) aagaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAATCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaaaa > 2:704812/1‑140 (MQ=255) aagaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaaaa > 1:2281192/1‑140 (MQ=255) aagaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaaaa > 1:3150116/1‑140 (MQ=255) gAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTaaaa > 1:3353133/1‑98 (MQ=255) aaaGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACtt < 2:4826681/140‑1 (MQ=255) aGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGc < 2:4758189/140‑1 (MQ=255) aGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGc < 2:40659/140‑1 (MQ=255) aaTTGGAAATCCGAACATTAAATTACTGTAACTCAATATTCGTTCGCTTCCATTCGTATTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGa < 1:254575/140‑1 (MQ=255) tGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAATCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGatat < 2:1526415/140‑1 (MQ=255) tGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGatat < 1:3768027/140‑1 (MQ=255) tGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGatat < 1:4699670/140‑1 (MQ=255) gTAAATCAGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATc < 2:2659308/140‑1 (MQ=255) aTCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCtt > 1:58443/1‑140 (MQ=255) aTCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCtt > 1:2445511/1‑140 (MQ=255) gAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGt > 1:4025798/1‑140 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCTTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa < 2:3562161/140‑1 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa < 1:554038/140‑1 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa > 2:3177188/1‑140 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa > 2:4548878/1‑140 (MQ=255) aCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTAt < 1:4978662/140‑1 (MQ=255) taaattaaTGTAAATCAATATTCCTTCGCTTCCATTAGTTTTACAAGAGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCaa > 1:4022362/1‑139 (MQ=255) caattaaTGTAAAGCAATAATCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTGTTAGCCTTTAGCACGAAAAAGAGTTCCTGGCCTGATAGCCGGTTTGTAtgacga > 2:3790472/2‑135 (MQ=255) attGTAAATCAATATTCGTTCGCTTCAATTCTTTTTAAACGCTTTTTCTCATCGATTTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTCGAACTAAAAATATTTACTTGCCTTATATCCCTTTTGTATTCATAAAAAc < 2:4184987/138‑1 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 2:4121980/1‑140 (MQ=255) aaTCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCg > 1:4790073/1‑140 (MQ=255) aaTATTCGTTCGCTTCCATTCGTTTTACACGGTTTTTCTCATCGAATTGTCCTAAAAAGCTCGTTAAATTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCAAAAAAACGACTCGCCaa < 2:3162102/140‑1 (MQ=255) tatTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTa < 1:1865699/95‑1 (MQ=255) tatTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAAcc > 1:1006225/1‑140 (MQ=255) cgttcgCTCCCATTGTTTTAACAAGGTTTTTCTCATCGCATTGTCATAAAACGCTCGTTAAAATTTTATCCTTTCCCACTAAAAAGAGTTAGTTGCCTGATATCCCTTTTGTATTCAAAAACACGACTCGCCAACCGTcc < 1:3510072/140‑1 (MQ=255) gttcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCg > 2:2032825/1‑140 (MQ=255) gttcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCg > 2:190450/1‑140 (MQ=255) ttcgGTTCCTTTCTTTTTACATGGTTTTTCTAATCGCTTTGTCATAAAAAGGTCGTGAAACTTTTATCGTTTACCACCAAAAAGTGTTACTTGCCTGATATCCGTTTTGTATTAATAAAAACGACTCGCCAACCGTCCgg < 1:3847268/140‑1 (MQ=255) ttcgCTTCCTTTCTTTTTAAAAGCTTTTTCTCATCGCTTTGTCATAAAAAGCTCGTTAAACTTTTATCCTTTAGCACTAAAAATAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCgg < 2:1739892/140‑1 (MQ=255) ttcgCTTCCATTGTTTTTACAAGCTTTTTCACATCGCATGGTCATAAAACGCAGGTTAACCTTTTATCCTTTCGCACTAAAAAGAGTTACTGGCATGAAATCCCTTTGTTATACATAAAAACGACTCGCCAACCGTCCgg < 1:4764925/140‑1 (MQ=255) ttcgCTTCCATTCTTTTTACATGCGTTTTCTCATCGCTTTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACTAAAAAGATTTACTTGCCTGATATCCCTTTGTTATTCATAAAAACGACTCGCCAACCGTCCgg < 2:1814311/140‑1 (MQ=255) ttcgCTTCCATTCGTTTTACAAGCTTTTTCTCATCGAATTTTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACTAAAAAGAGTTACTTGCCTGATATCCCTTTTGTTTTCATAAAAACGACTCGCCAACCGTCCgg < 2:2394462/140‑1 (MQ=255) acagCTTCCTTTCGTTTTACAAGCGTTTTCTCATCGCTTTGTCCTAAAAAGCTCTTTAAACTTTTATCCTTTAGCACTAAAAAGAGTTACTTGCCTGATATCCCTTTTTTATTCATAAAAACGACTCGCCAACCGTCCgg < 2:2758919/137‑1 (MQ=255) acagCTTCAATTCTTTTTAAAAGTTTTTTCTCATGGATTTGTCCTAAAAAGCTGGTTAAACTTTTACCCTTTACCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTAATAAAAACGACTCGCCAACCGTCCgg < 2:2166750/137‑1 (MQ=255) tcgTTTCCATTCTTTTTACACGCGTTTGCTCTTCGGATTGTCCTAAAAAGCTGGTGAAACTTTTATCCTTTAGAACTAAAAAGCTTTACTTGCGTGATATCCCTTTTGTATTAATAAAAACGACTCGCCAACCGTCCGGa < 2:35019/140‑1 (MQ=255) tcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCGCTTTTGTATTCATAAAAACGAATAGCCAACCGTCCGGa > 2:3727437/1‑140 (MQ=255) cgCTTCCTTTGGTTTTACAAGCGTTTACTCATCGCATTGTCCTAAAACGCTCGTTAAACTTTTTTCCTTTAGCACGAAAAAGAGTTACTTGCCTTATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGAt < 2:4915981/140‑1 (MQ=255) cccTTCCATTCGTTTTACAAGCGTTTACTCATCTCTTTTTCCTAAAACGCTCTTTAAAATTTTTTCCTTGAGCACGAAAAAGTTTTACTTGCCTCATATCCCTTTTGTATTCATAAACACGACTCGCCAACCGTCCGGAt < 2:1490953/138‑1 (MQ=255) cTTCCATTCTTTTTACAAGCGTTTTCTCATCGATTTGTCATAAAAAGCTCTTTAAACTTTTATCATTTAGCACCAAAAAGAGTTAGTTGCATTATATCCCTTTTGTATTAATAAAAACGACTCGCCAACCGTCCGGATcc < 2:220101/140‑1 (MQ=255) cTTCCATTCTTTTTACAAGCGTTTTCTCATCGAATTGTCATAAAAAGCTCGTGAAAGTTTTATCCTTTACCACCAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAACACGACTCGCCAACCGTCCGGATcc < 2:3973406/140‑1 (MQ=255) cTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATcc > 1:864238/1‑140 (MQ=255) cTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATcc > 2:1666274/1‑140 (MQ=255) cATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATACCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATACTCTa > 2:1378982/1‑140 (MQ=255) ctttttAAAAGGTTTTTATAATCGCATTGTCCTAAAAAGCTCGTCAAAATTTTATCATTTAGCACTAAAAAGTGTTATTTGCCTTATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGt < 2:814483/138‑1 (MQ=255) tttACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCAc > 1:3220988/1‑140 (MQ=255) ttACATGCGTTTTATCAGCGCATTTTACTAAAACGGTGGTTAAATTTTTATCGTTTACCACCAAAAAGTGTTAGTTGCCTGATACCCCTTTTGAATTCAAAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACg < 1:4201048/140‑1 (MQ=255) ttACACGCGTTTTCTCATCGCTTTGTCATAAAAAGCTCGGTAAAGTTTTATACTTTCGCACTAAAAAGATTTACTTGCCTTATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACg < 2:3024961/140‑1 (MQ=255) ttACAAGCTTTTTCTAATCGCTTTTTCATAAAAATCTCTTGAAACTTTTATCATTTAGCACTAAAAAGTGTTACTTGCGTGATTTCCCTTTTTTATTCATAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACg < 2:676138/140‑1 (MQ=255) ttAAAAGCTTTTTATCATCGATTTTTACAAAAAAGATCTTCAAAATTTTATCAATAAGAACGAAAAAGAGTTACTGGCATGATATCCCTTTTGTTTTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACg < 2:3869980/140‑1 (MQ=255) tgtgTTTTATCATCGCTTTTTCATAAAAAGCTCGTGAACATTTTTTCCTTTAGCACTAAAACTAGTTACTTGCCTTATATCCTTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTcc < 2:3393696/137‑1 (MQ=255) gCGTTTTCAAATCGCATTGTCCAAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCGTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 2:2140784/140‑1 (MQ=255) gCGTTTTATCATCTCTTTGTCATAAAAAGCTCGTGAAAGTTTTATCCTTTAGCACTAAAAATAGTTACTTGCCTTATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 2:4445422/140‑1 (MQ=255) gCGTTTACTCATCGCATTGTCATAAAAAGCGCGTTAAAATTTTATCCTTTAGCACGAAAAATAGTTACTTGCCTTATATCCTTTTTTTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 1:4755252/140‑1 (MQ=255) gtttttCTCATGGCTTTGTCATAAAAAGCTGTTTAAATTTTTATCATTTCGCACGAAAATTTTTTAGTTGCTTTATATCCTTTTTTTATTAAAAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 1:277197/138‑1 (MQ=255) ggTTTTCTAATCGAATTGTCAAAAAACGCTCGTAAACATTTTATCCTTTAGCACCAAAAAGAGTTACTTGCCTTATATCCCTTTTGTTTACATAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 1:2188713/139‑1 (MQ=255) cGTTTTATCATCGCTTTGTCATAAAAAGATCTTTAAACTTTTATCCTTTAGCACTAAAAATATTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 2:1024633/140‑1 (MQ=255) ttttCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATgg > 2:871003/1‑140 (MQ=255) ttttCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATgg > 1:4569029/1‑140 (MQ=255) ttCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCt > 2:4347218/1‑140 (MQ=255) ttCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCt > 2:1125656/1‑140 (MQ=255) taacATCCCTTTGTCCTAAAATTATCGTTAAATTTTTTAACTTTAGCACCAAAAACTGTTCAGTCCCTTTTATCCCTTTTTTATACATAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTc < 1:2147368/137‑1 (MQ=255) tCGCTTTTTCCTAAACAGCTCGTGAAACTTTTATCATTTAGCACGAAAAAGTTTTAGTTGCCTTATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTa < 1:3026967/140‑1 (MQ=255) tCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTa > 1:2907325/1‑140 (MQ=255) tCGCATTGTCCTAAAAAGCTCGTGAAACTTGTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTGTTGTATTCATACAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTa > 1:1200812/1‑140 (MQ=255) cGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTAc > 1:2005159/1‑140 (MQ=255) tCCTAAACAGGCCGTGAAAGTTTTCACCTTGACCACGAAAATGTGTTACTTCCCTGATATCCCTTTTTTTTCCAAACACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTtct < 1:1605788/140‑1 (MQ=255) gccTCAAAACCTCTTGAAACTTTTATCCTTCCGCACGAAAAAGAGTTACTTGCCGGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTtct < 2:3301833/139‑1 (MQ=255) ccTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTtctc > 2:4148381/1‑140 (MQ=255) ccTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTtctc > 2:3627166/1‑140 (MQ=255) | TCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTTCTC > NZ_CP034943/3996718‑3996995 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |