| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 4,022,597 | G→T | 5.5% | V607F (GTT→TTT) | EO946_RS20675 → | thioredoxin domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 4,022,597 | 0 | G | T | 5.5% | 940.7 / 5.0 | 368 | V607F (GTT→TTT) | EO946_RS20675 | thioredoxin domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (153/175); new base T (4/34); total (157/211) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.29e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 377 total aligned reads displayed.
AGTCACAGGCGACTTATCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGCAGCAGACTA > NZ_CP034943/4022458‑4022736 | aGTCACAGGCGACTTATCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCg < 2:435539/140‑1 (MQ=255) gACTTATCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTgg < 1:3038472/140‑1 (MQ=255) acgtATCACTCATTGAAAAAGCAGAAACGATGGTTTCGGTGTTCAAGCCGGATATCGAAGCGTCTCCGAGCGGCCATGCTTTCTTTATGCAAAGGGTGGTAAAGCATGTGATGCCTACAAAGGAAATCGTTATTTTTGGc > 2:4280145/4‑140 (MQ=255) aCTTATCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAATGAAATCGTTATTTTTGGc > 1:3585366/1‑140 (MQ=255) aCTTATCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGc > 1:873000/1‑140 (MQ=255) aTCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAgcg > 1:4950411/1‑140 (MQ=255) aTCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAgcg > 1:200325/1‑140 (MQ=255) tgatcgAAAAAGCGGAAACAATGTTTTCCGTGTTCAAGCCAGACATAGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGTGTGTTAAGGCATCTGATGCCTAAAAAAGAAATCGTGATTTTTg > 2:3999234/6‑129 (MQ=255) aTTGACAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCACAGCGTGTTAAAGCATGTGATGCCTATAAAGGAAATCGTTATTTTTGGCAGCGCAGACGa > 2:2749039/1‑140 (MQ=255) aTTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGa > 2:1028472/1‑140 (MQ=255) aTTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGa > 2:2819961/1‑140 (MQ=255) aTTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGa > 2:4325555/1‑140 (MQ=255) aTTGAAAAAGAAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGa > 1:4384418/1‑140 (MQ=255) tGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATc > 1:2859085/1‑140 (MQ=255) aaaGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATccagc > 2:3166366/1‑140 (MQ=255) aGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATccagcca > 1:1308303/1‑140 (MQ=255) aGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATccagcca > 2:3723969/1‑140 (MQ=255) cAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGa > 1:1632176/1‑140 (MQ=255) gAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGaaa > 2:4447984/1‑140 (MQ=255) aaaCGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGaaaa < 2:451674/140‑1 (MQ=255) aaaCGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGaaaa < 1:4120742/140‑1 (MQ=255) aaaCGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGaaaa < 1:2762593/140‑1 (MQ=255) aaaCGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGaaaa < 1:2907426/140‑1 (MQ=255) aTGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAAt < 1:2297055/140‑1 (MQ=255) aTGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAAt < 1:3166366/140‑1 (MQ=255) aTGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAAt < 1:4227608/140‑1 (MQ=255) aTGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAAt < 1:4321738/140‑1 (MQ=255) aTGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAAt < 1:1311850/140‑1 (MQ=255) aTGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAAt < 1:1027504/140‑1 (MQ=255) gtTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCAc < 1:3867006/140‑1 (MQ=255) gtTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCAc < 2:1850501/140‑1 (MQ=255) ccGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCaaaa < 2:1651825/140‑1 (MQ=255) cGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCaaaaa < 2:4172645/140‑1 (MQ=255) atatCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGcc > 2:349516/1‑140 (MQ=255) atatCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGcc > 2:3284529/1‑140 (MQ=255) atCTAAGCGTATCCGAGCGGCAATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATTCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAAGAAATCACCACTGCACTTCAAAAAGCCtt < 2:4585309/140‑1 (MQ=255) atCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCtt < 2:2269228/140‑1 (MQ=255) aaGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAg < 2:541217/140‑1 (MQ=255) cGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGccc > 2:292605/1‑140 (MQ=255) tCCGAGCGGCCATGCTTTCTTTATGCACAGCGTGTTAAAGCATGTGATGCCTAAAAAGCAAATCGTTATTTTTGGCAGCGCCGTCGATCCAGCCCGCAAACACGTCACCACTGCACTGCAAAAAGCCTTTAAGCCCCACg > 1:2658008/1‑140 (MQ=255) aGCGGCCATGCTTTCTTTATGCAAAGCTTGTTTAAGAATGTCATGCCTAAAAAGGAAATCTTTATTTTTGGCAGCGCAGACGATCCAGCAAGAAAACAAATCACAACTGCACTTAAAAAAGCATTTAAGCCCAACGACTc < 2:841446/140‑1 (MQ=255) aGCGGCCATGCTTTATTTATGCAAAGCGTGTTAAAGCATGTTATGCCTAAAAATTAAATCTTTATTTTTGGCAGCGCAGAGGATCCAGCCAGAAAAAAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTc < 2:1940882/140‑1 (MQ=255) cGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACACATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCa > 1:1272284/1‑140 (MQ=255) cGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCa > 1:2575285/1‑140 (MQ=255) ccATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCAttt > 1:3373218/1‑140 (MQ=255) cATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCAtttt > 2:3104422/1‑140 (MQ=255) tttcggCAAAGCGTTTTAACGATTGTTCTGCATAACACGCAATCCGTTATTTTTGGCAGCCCAGACGATCCAGCCAGAAAAAAAATCACCACTGCACTTCAAAAACCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga < 1:752485/135‑1 (MQ=255) tttATGCAATGCGTGTTAAAGCATGTGATGCATAAAAAGGAAAGCTTTATTTTTGGCAGCGCAGACTATCCAGCCAGAAAACAAATCACCACGGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga < 2:2223746/140‑1 (MQ=255) tttATGCAAAGGGTGTTAACGCATGTGATGCCTAAAAAGGAAAGCGTTATTTTGGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTAAAAACGCCTTTAACCCCAACGACTCCATTTTGGTGGCaga < 2:486105/140‑1 (MQ=255) tttATGCAAAGCTTTTTAAACCATGTGATGCCTAAAAAGCAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAAAAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga < 2:4837165/140‑1 (MQ=255) tttATGCAAAGCGTTTTAACGCATGTGATGCCTAAAAAGGAAATCGTTATTTTGGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga < 2:4694157/140‑1 (MQ=255) tttATGCAAAGCGTTTTAAAGCATGTGAGGCCTAAAAAGCAAATCTTTATTTTGGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTCCACTACAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga < 1:953429/140‑1 (MQ=255) tttATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga > 1:1931903/1‑140 (MQ=255) tttATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTCCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga < 2:1704041/140‑1 (MQ=255) tttATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAAAAAATCACAACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga > 2:2033307/1‑140 (MQ=255) tttATCCAACGCGTGTTAACGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCACAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCCACGACTCCATTTTGGTGGCaga < 2:1303674/140‑1 (MQ=255) tttAGGCAACGCGTGTTACCGCATGTGAGGCCTAAAAAGGAACTCTTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAAAAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga < 2:1422467/140‑1 (MQ=255) ttATGCAAACCGTGTTAAAGCAGTTGATGCCTAAAAAGCAAAGCGTTATTTTTGGCAGCGCAGACGATCCAGCAAGAAAAAAAAACACCACTGAACTTCAAAACGCCTTTAAGCCCAACGACTCCATTTTGGTGGCagag < 1:4850246/140‑1 (MQ=255) tGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCAt > 2:2539195/1‑140 (MQ=255) gCAAAGCGTGTTACAGCATGTGATGCCTAAAAAGCAAATCGTTATTTTTGGCAGCGCAGACGAGCCACCCAGAAAACAAATCACCACTGCACTTCAAAACGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATc < 2:3799824/140‑1 (MQ=255) gCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATc > 2:3309412/1‑140 (MQ=255) aaGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTg > 2:1474756/1‑140 (MQ=255) aaGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTg > 1:3991285/1‑140 (MQ=255) aGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGa > 2:2103619/1‑140 (MQ=255) gCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGAt < 2:421773/140‑1 (MQ=255) gCGTGTTAAAGCATGTGATGCCTAAAAAGCAAATCGTTATTTTTGGAAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGAt < 2:1145609/140‑1 (MQ=255) ggtgtTAAAGCATGTTATGCATAAAAAGCAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCATAAAAAAAATCACCACTCAACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATc < 1:144067/139‑1 (MQ=255) cGTTTTAAAGCTTTTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCCGCCAGAAAAAAAATCACCAGTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATc < 1:3790005/140‑1 (MQ=255) cGTGTTAAAGCATGTGATCCCTAAAACCCAAAACGTTATTTTGGGCAGCGCAGACGATCCCGCCAGAAAACAAATCACCACTGCACTACAAAAAGCCTTTAACCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATc < 1:3459331/140‑1 (MQ=255) gtTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAAt > 1:4712381/1‑140 (MQ=255) gtTAAAGCATGTGATCCCTAAAAAGGAAATCTTTATTTTTGGCAGCGCAGACGATACAGCCAGAAAAAAAATCACCACTGCACATCAAAAAGCCTTTAAGCCAAACGACTCAATTATGGTGGCAGAGCAACCTGATCAAt > 1:2542597/1‑140 (MQ=255) acgcttgtgAGGCCAAAAAAGCAAATGGTTTTTGTTGGCCGGGCAGACGACCCACCCACAAAAAAAATCACCACGGCACTTCAAACAGACTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCaa < 1:1861068/135‑1 (MQ=255) aacaaTGTGATGCAAAAAAAGGAAATCGTTATTTTTGGCAGCGAAGACTATCCAGCAAGAAAAAAAATCACCACTGCACTTCAAAACGCATTTAACCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCaa < 1:42984/136‑1 (MQ=255) aaGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCAAGAAAACAAATCACCACTGCACTTCAAAAACCGTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCaa < 2:368499/140‑1 (MQ=255) aGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCaaa > 1:2365974/1‑140 (MQ=255) gCATGTGATGCATAAAACGTAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTAAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAg < 1:1200360/140‑1 (MQ=255) tgtgATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATACTGATCAATGCAAAGACa > 1:1789350/1‑140 (MQ=255) aattattccTAAAAAGGAAATCTTTATATTAGTCACCGCATAAAAAAAATCAAGAAAAAAAATCAACACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATATTGTTGGCAGAGCATCATGATAAATGCAAATACa > 1:1092290/8‑140 (MQ=255) gtgATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACAt > 2:736556/1‑140 (MQ=255) gtgATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACAt > 2:4917940/1‑140 (MQ=255) tgATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATa > 2:1447508/1‑140 (MQ=255) tgATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATa > 2:1249353/1‑140 (MQ=255) ttGCCTAAAACGGAACTGTTTATTTTTGCCAGCGCAGACCACCCACCCACAAAAAAAATCACCACGCCACTTCAAAACGCATTTACCCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGc < 1:1703910/139‑1 (MQ=255) tcccTAAAAATTAAATCTTTATTTTTGGCAGCGCAGACGATCCACCAATAAAAAAAAACACCACGGCACTTCAAAAAGCCTTTAAGCACAACGACTCCATTTTGTTGGCAGAGCATCCTGATCAATGCAAAGACATAGCa < 1:1501748/138‑1 (MQ=255) tGCATAAAAAGCAATTCTTTATTTTTGTCAGCTAAGACTATCCAGCCAGAAAAAAAATCACAACTTAACTTAAAAAAGCATTTAACCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCa < 1:4589141/140‑1 (MQ=255) ccTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCCCCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCAcc > 2:3942953/1‑140 (MQ=255) ccTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCAcc > 2:3417713/1‑140 (MQ=255) ccTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCAcc < 1:3663110/140‑1 (MQ=255) ccTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTGTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCAcc > 2:2489283/1‑140 (MQ=255) catAAAAATGAAATCTTTATTTTGGGCAGCGCATACGCTCCAGCCAGAAAACAAAAAACCACTCCAGTTCAAAACGCCTTAAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCAcc < 1:572250/138‑1 (MQ=255) cTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCAccc > 2:3047832/1‑140 (MQ=255) atAAAAAGCAAATCCTTAGTTTGGCCAGCGCACACGACCCCTCCATAAAAAAAACCACCACTGCAAGACAAAAAGCATGTAACCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCAccc < 1:329971/139‑1 (MQ=255) tAAAAAGCAATACGTTTTTTATGCATGCGAAGACCTTCAAGCCAGAAAAAAAAACAACAATGAAATAAAATCACCAATTACCCCCAACGACTCCATTTTGGTTGCAGAGCATCATGATCAATGCTAAGACATAGCACCCt < 1:2101755/140‑1 (MQ=255) aaaGTAACTCGTTATTTTTGGCAGCGCAGACGATCCAGCCATAAACAAAATCACCACTGCACTTCAAAAAGCCTTTACGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTg < 2:3211043/140‑1 (MQ=255) aaaGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAACCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTg < 2:1550994/140‑1 (MQ=255) cggATATCGTTATTTTGGGCAGCGCATACGATCCAGCCATAAAACAAATCACCACTGCACTACAAAAAGCCTTAAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAATGACATAGCACCCTTTgca < 2:239469/139‑1 (MQ=255) aaaTCTTTATTTTTGGCAGCGCAGACTATCCAGCCATAAAAAAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTgcagca < 2:3854206/140‑1 (MQ=255) aaaTCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTgcagca > 2:4723602/1‑140 (MQ=255) aaaTCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTgcagca > 2:3639442/1‑140 (MQ=255) aTCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCa < 2:2620021/54‑1 (MQ=255) | AGTCACAGGCGACTTATCACTCATTGAAAAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGCAGCAGACTA > NZ_CP034943/4022458‑4022736 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |