| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 704,769 | G→C | 5.0% | E136D (GAG→GAC) | EO946_RS03655 → | phosphotransferase enzyme family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 704,769 | 0 | G | C | 5.0% | 579.8 / 16.2 | 172 | E136D (GAG→GAC) | EO946_RS03655 | phosphotransferase enzyme family protein |
| Reads supporting (aligned to +/- strand): ref base G (76/87); new base C (4/5); total (80/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 175 total aligned reads displayed.
AAGACGTTGAAGAAGTGCCGGATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAGACAAAGGTGTTTCAGCAAGCCGATTCTCTG > NZ_CP034943/704633‑704907 | aaGACGTTGAAGAAGTGCCGGATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGAtc > 2:1716378/1‑139 (MQ=255)aaGACGTTGAAGAAGTGCCGGATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATg > 2:713852/1‑140 (MQ=255)aaGACGTTGAAGAAGTGCCGGATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATg > 2:675534/1‑140 (MQ=255) gACGTTGAAGAAGTGCCGGATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGca < 1:3009629/140‑1 (MQ=255) gACGTTGAAGAAGTGCCGGATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGca < 2:1940498/140‑1 (MQ=255) ttGAAGAAGTGCCGGATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGc < 1:1683268/140‑1 (MQ=255) gaagaaGTGCCGGATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCt > 2:961104/1‑140 (MQ=255) gaagaaGTGCCGGATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCt > 2:2272462/1‑140 (MQ=255) gTGCCGGATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACaaa < 1:679608/140‑1 (MQ=255) gTGCCGGATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACaaa < 2:1332598/140‑1 (MQ=255) gTGCCGGATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACaaa < 1:251115/140‑1 (MQ=255) ggATGGAACCGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCt < 2:133525/140‑1 (MQ=255) ggATGGAACCGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCt < 2:2017094/140‑1 (MQ=255) ggATGGAAACGGCTGTTCATTTTTACTGAGAGTGTATGAGAACGCGCCGGGGCAAAAAGTGGAAGCATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCt < 2:2460466/140‑1 (MQ=255) ggATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGTCGAGATGCACAGCCTGACAAAAAGCt < 1:2441056/140‑1 (MQ=255) ggATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCt < 1:996690/140‑1 (MQ=255) ggATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCt < 2:2771211/140‑1 (MQ=255) ggATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCt < 1:1588106/140‑1 (MQ=255) tGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATc > 2:1107089/1‑140 (MQ=255) tGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATc > 2:324292/1‑140 (MQ=255) gAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCaa < 1:3111388/140‑1 (MQ=255) gAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCaa < 1:2715188/140‑1 (MQ=255) gAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCaa < 1:1568950/140‑1 (MQ=255) gAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCaa < 1:2443853/140‑1 (MQ=255) gAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCaa < 2:259529/140‑1 (MQ=255) aaaCGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTCTTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAAc > 1:1775419/1‑140 (MQ=255) ggcggTTCATTTTTACTGAGCGTGTATGAGACAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGGAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAg < 2:388324/140‑1 (MQ=255) ggcggTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAg < 1:2596204/140‑1 (MQ=255) gcggTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGCCTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGc > 1:1190039/1‑140 (MQ=255) gcggTTCATTTTTACTGAGAGTGTATGAGAAAGAGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTAGGTGCTTGTCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGc > 1:1396735/1‑140 (MQ=255) ttCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAAcc < 2:2339458/140‑1 (MQ=255) ttCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAAcc < 2:498483/140‑1 (MQ=255) ttCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAAcc < 2:3039379/140‑1 (MQ=255) gagTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGa < 2:2882141/140‑1 (MQ=255) tgtATGAGAAAGCGCCGGGGCAAAAAGTGGATGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCAGCATGCACAGCCTGACAAAAAGCTACAAATTGAGCAATCCCGCTTTCAAAAGACAg > 1:1661345/1‑140 (MQ=255) tgtATGAGAAAGCGCCGGGGCAAAAAGTGGATGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCAGCATGCACAGCCTGACAAAAAGCTACAAATTGAGCAATCCCGCTTTCAAAAGACAg > 1:399205/1‑140 (MQ=255) tATGAGATAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTTGTATGAAACGCTATTTTATGAGCTTGGCAGATTCACAGGCGAGATGCACAGCCTGTCAAAAAGCTATCAACTGAGCAACACTGCTTTTAAAATACAGGa < 1:2300214/140‑1 (MQ=255) tGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAAt < 2:985876/140‑1 (MQ=255) tGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAAt < 2:837443/140‑1 (MQ=255) gagaAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATg < 2:1124002/140‑1 (MQ=255) agaAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATgg > 1:1034224/1‑140 (MQ=255) aaaGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGa < 2:2671312/140‑1 (MQ=255) aaaGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGa < 2:1503879/140‑1 (MQ=255) aGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATg > 1:1360555/1‑140 (MQ=255) aGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATg > 1:745967/1‑140 (MQ=255) aGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTGTTAAAAGACAGGAATGGGATg > 2:101707/1‑140 (MQ=255) aGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGAGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATg > 2:1774633/1‑140 (MQ=255) aGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTCGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATg > 1:1141680/1‑140 (MQ=255) aGCGCCGGGGCAAAAAGGGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTGTTAAAAGACAGGAATGGGATg > 2:908553/1‑140 (MQ=255) cgcCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGaa > 1:1458070/1‑140 (MQ=255) cgcCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGaa > 1:761602/1‑140 (MQ=255) cgcCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGaa > 1:1495051/1‑140 (MQ=255) cgcCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGaa > 2:1506259/1‑140 (MQ=255) cgcCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGAGACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAACAGACAGGAATGTGATGaa > 1:2328305/1‑140 (MQ=255) ccGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAaga > 2:2937734/1‑140 (MQ=255) gggCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAgagga < 1:450152/140‑1 (MQ=255) gaagaaTCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCaa < 1:1818917/84‑1 (MQ=255) gaagaaTCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCaa < 1:261113/84‑1 (MQ=255) gaagaaTCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCaa > 2:1818917/1‑84 (MQ=255) gaagaaTCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCaa > 2:261113/1‑84 (MQ=255) gaagaaTCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCt < 1:779564/140‑1 (MQ=255) gaagaaTCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCt < 1:2974211/140‑1 (MQ=255) aaTCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCGTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTgaga < 1:2715550/140‑1 (MQ=255) aaTCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTgaga < 2:1574494/140‑1 (MQ=255) aaTCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTgaga < 2:745967/140‑1 (MQ=255) cTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTAtg < 1:2675792/140‑1 (MQ=255) tGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCg < 1:268678/140‑1 (MQ=255) tGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCg < 1:2087152/140‑1 (MQ=255) cGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGAt > 1:2483287/1‑140 (MQ=255) cGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGAt > 1:1939146/1‑140 (MQ=255) cGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGAt > 1:891101/1‑140 (MQ=255) cGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGAt > 1:2764782/1‑140 (MQ=255) cTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATcc > 1:1759587/1‑139 (MQ=255) cTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCa > 2:2541117/1‑140 (MQ=255) cTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCa > 1:165387/1‑140 (MQ=255) cTATTTTATGAGCTTGGCAGATACACAGGCAGCATGCACAGCCTGACAAAAGGCTACAAATTGAGCAATCCCGCTTTCAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAATATGTGCCTGAAGATCa < 2:399505/140‑1 (MQ=255) cTATTTTATGAGCTTGGCAGATACACAGGCAGCATGCACAGCCTGACAAAAAGCTACAAATTGAGCAATCCCGCTTTCAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAATATGTGCCTGAAGATCa < 2:2352105/140‑1 (MQ=255) cTATTTTATGAGCTTGGCAGATACACAGGCAGCATGCACAGCCTGACAAAAAGCTACAAATTGAGCAATCCCGCTTTCAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAATATGTGCCTGAAGATCa < 2:1661345/140‑1 (MQ=255) tATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAg > 2:540326/1‑140 (MQ=255) tATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAg > 2:1445326/1‑140 (MQ=255) tATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAg > 2:2994965/1‑140 (MQ=255) tATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAACAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAg > 2:2935991/1‑140 (MQ=255) aGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAGACAAAGgtg > 2:1894094/1‑140 (MQ=255) gCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAGACAAAGgtgt > 2:2294615/1‑140 (MQ=255) gCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAGACAAAGgtgt > 1:2161170/1‑140 (MQ=255) ttGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTgaga < 2:156032/107‑1 (MQ=255) ttGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTgaga > 1:156032/1‑107 (MQ=255) ttGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAGACAAAGGTGttt > 2:726977/1‑140 (MQ=255) ggCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAGAGTCTGTGGCCGAAGATCAGACAATGGTGTTTct > 2:1900539/1‑139 (MQ=255) cAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAGACAAAGGTGTTTCAGc < 1:2272462/140‑1 (MQ=255) aGATACACAGGCGAGATGCACAGCCTGACAAACAGCTATCAACTGAGCAACCCTGCTTTTAACAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAGACAAAGGTGTTTCAGCa < 1:480385/140‑1 (MQ=255) aGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAGACAAAGGTGTTTCAGCa < 1:617918/140‑1 (MQ=255) caGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGa > 2:1465961/1‑59 (MQ=255) caGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAGACAAAGGTGTTTCAGCAAGCCGAt > 2:2129191/1‑140 (MQ=255) aGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAGACAAAGGTGTTTCAGCAAGCCGAtt > 1:1004284/1‑140 (MQ=255) gCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAGACaaa > 2:2003868/1‑118 (MQ=255) gCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAGACAAAGGTGTTTCAGCAAGCCGATtct > 2:767120/1‑140 (MQ=255) gCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAGACAAAGGTGTTTCAGCAAGCCGATtct < 1:3015265/140‑1 (MQ=255) gCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAGACAAAGGTGTTTCAGCAAGCCGATtct > 1:2398258/1‑140 (MQ=255) agaTGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAGACAAAGGTGTTTCAGCAAGCCGATTCTCtg > 2:3071955/1‑140 (MQ=255) | AAGACGTTGAAGAAGTGCCGGATGGAAACGGCGGTTCATTTTTACTGAGAGTGTATGAGAAAGCGCCGGGGCAAAAAGTGGAAGAATCGGACTGGAATGAAACGCTATTTTATGAGCTTGGCAGATACACAGGCGAGATGCACAGCCTGACAAAAAGCTATCAACTGAGCAACCCTGCTTTTAAAAGACAGGAATGGGATGAAGAGGAGCAATTAAAGCTGAGAAAGTATGTGCCCGAAGATCAGACAAAGGTGTTTCAGCAAGCCGATTCTCTG > NZ_CP034943/704633‑704907 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |