| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 755,531 | A→C | 10.2% | Q22H (CAA→CAC) | EO946_RS03880 → | rhamnogalacturonan acetylesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 755,531 | 0 | A | C | 10.2% | 375.3 / 3.8 | 160 | Q22H (CAA→CAC) | EO946_RS03880 | rhamnogalacturonan acetylesterase |
| Reads supporting (aligned to +/- strand): ref base A (102/31); new base C (3/20); total (105/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.81e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 165 total aligned reads displayed.
CACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCGG > NZ_CP034943/755392‑755667 | cACCGTTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGTAATG‑AGAAATGGCAAATCACATTTATCTTGCTGTCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCaa < 2:1370650/140‑1 (MQ=255)cACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCaa > 1:2869532/1‑140 (MQ=255) ccGTTTTTTTCATGGGAAGAGCTGTCCATTATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAgg < 1:1073980/140‑1 (MQ=255) ttttttCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAgggggg > 2:1720879/1‑140 (MQ=255) cAAGGGAATAGCTTTCCATGATTGATGCCATATGAAACGAAAAATACGAGGGGTAATG‑AGAAATGGCAAATCACATTTTTCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGAACAAATCACGGGGGGTggggg < 2:622942/140‑1 (MQ=255) tatttatgagaTGTCCATTATTGATGCAATTTGAAATTAAAAAATTGATGGTTTATT‑ATAAATGTCAATTCAATTTTTTCTTGCTGGCGATTCAACTTTTCTAACTTATGGATACAGCACAAATCAAGGGGGGTGGGGGc < 2:1299139/133‑1 (MQ=255) ctttCCATTCTTGATGCCAAATGAAACCAAAAAAACGAGGGGGAATG‑AGAAATCGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGACACAGCACAAATCACGGGGGGTGGGGGCAGTTTCTCgg < 1:1072244/137‑1 (MQ=255) tCCATGCTTGATGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 1:342903/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAACTGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACCAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 1:1875041/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 1:1287292/1‑140 (MQ=255) tatGCCATATGAACAGAAAAAAAGGAGGGGGAATG‑AGAAATGTCAAATCACATTTATCTTTCTGGCTATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGcc < 2:2511522/139‑1 (MQ=255) gatGCCATATGAAACGAAAAAAACGACGGGGAATG‑AGAAATGCCAAATCACATTTATCGTGCGGGCGATTCAACTGTTCAACCGTATGGAGACAGCACAACACAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGcc < 1:153168/140‑1 (MQ=255) atGCCATATGAAACGAAAAAAACGAGTGGGACTG‑AGAAATTGCAAATCACATTTATATTGCTGGAGATTCAACTGTTCAAACGTATGGATTCAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTTCCg > 2:2722928/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGTGAATG‑AGAAATGGCAAATCACATTTATCTTTCTGTCGATTAAACTGTTCAATCGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATATGCCg > 2:118635/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAATCGTATGGAGACAGCACATATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:2036555/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACACATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:2286957/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:1215695/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:560010/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:649389/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:772609/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:2454980/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:2621115/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:1273092/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:309393/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGGTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:1528161/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACAGTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:386884/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATCGAAAATCACATTTTTCTTGCTGGCGATTCAACTGTTCAAACGAACGGAGACAGCACAACTCCCGGCGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg < 2:620927/140‑1 (MQ=255) gCCATATGAAACCAAAAAAACGAGGGCGAATG‑AGAACGTGCAAATCACATTGATCTTGCTGGCGATTAAACTGTTCAAACCTATCGAGACAGCACAACTCCAGGGGGCTCGGGCCAGTTTCTCGGCTCGCATCTGCCGGa < 1:1027689/140‑1 (MQ=255) cccacacgAAACGACAAAAACGAGGGGGACTG‑AGAAATGGCAAAACACAGTTATCTTGCTGGCGATTCACCTCTTCAAACGTATCGAGACAGCACAAAACAAGGCGGGTGCGGGCAGTGTCTCGGCTCGCATCTGCCGGa < 1:2464925/133‑1 (MQ=255) cATATGAAAATAAAAAATGTTGGTGGAATG‑AGATATGGCAAATCAGATTTATCTTGCTGGCGTTTATACTGTTGAATCGTATGGAGACAGCACAAATCAAGGGGGGTTGGGGCAGTTTCTCGGCTCGCATCTGCCTGAGc < 2:1685900/140‑1 (MQ=255) tatGAAACGAAAAAAACGATGGGGAATG‑AGAAATGGCAAATCACAATTATATTGATGGCGATTCAACTGTTCAATCGTATGGAGACAGCACAAATCAAGGGGGGTGTGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCat > 2:2467215/1‑140 (MQ=255) atGAAACGAAAAAAACGAGTGTGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGACACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCata < 2:1915292/140‑1 (MQ=255) atGAAACGAAAAAAACGAGGGTGAATG‑AGAAATGTCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGCTGGGGCCAGTTTCTCGGCTCGCATCTGCCGGAGCata < 2:815006/140‑1 (MQ=255) atGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCata > 2:2481106/1‑140 (MQ=255) ataCGAAAAATACGAGTGGTTATG‑ATAAATGTAAAATGTCTTTTATCTTGCTGGCGTTTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:1939270/138‑1 (MQ=255) aaaCGATAATAACGTGGGGGAATG‑TGAAATGGCAAATCTCATTTTTCTTGCTGGCTATTCAAGTTTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGCCAGTTTCTCGGATCGCATCTGCCGGAGCATATTc < 2:2763489/140‑1 (MQ=255) aaaCGACAAAAACGAGGCTGAATG‑AGAAATCGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAACCGTATGGAGACACAACAAATCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 1:998581/140‑1 (MQ=255) aaaCGAAAAAAACGATGGGGAATG‑ATAAATGTCAAATCACATTTATCTTGCTGGCGATTCAACTTTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:2067/140‑1 (MQ=255) tgtataaaaaaCGAGGAGGAATGAAAAAATGGCAAATCATATTTATCTTGCCGGCGATTCGACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGCTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 1:2242626/135‑1 (MQ=255) aCGAAAAAAACGCGGGGGAATG‑AGCACTCCCAAATCACCTTTATCTTGCTGGCGATACAACTGCTCAACCGTATGCCGCCAGCACAAAGCACGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa < 1:2876550/140‑1 (MQ=255) aCGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa > 1:421836/1‑140 (MQ=255) cgatgttgAATG‑ATAAATGGAAAATCACATTTATCTTGCTGGCTCTTCAACTGTTCAAACGTATTGAGACAGCAAAAATCAAGGGTGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACa < 2:806930/133‑1 (MQ=255) tgttaTG‑ATAAATTGAAAATGACAGTTATCTTTCTGGCGATTCAACTTTTCAACCGTATGGATACAGCAAAATTCATGGGGGGTGGGGGAATTTTCTCTGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACagagga < 2:823305/136‑3 (MQ=255) ggAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACCCCACAAATCAAGGGGGGTGGGGCCAGTGTCTCGGCTCTCATCTGCCGGATCATCTTCAAGTGATTAACAGAGCaa > 2:2451606/1‑140 (MQ=255) gactG‑AGAAATGGCAACTCTCCTTTATCGTGCTGGCCATTCAACGGTACAACCGTATGCACACAGCACACAGCCCGGGGGGGGGGCGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAAt < 1:72707/137‑1 (MQ=255) gatggtgaAATGGCAAATCACATTTTTCTTTCTGGCTATTCAACAGTTCAAAGGTTTGGAGCGAGCACATATGATGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAAt < 2:1300145/134‑1 (MQ=255) g‑agaAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCggg > 2:1873208/1‑140 (MQ=255) ggCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAATCGTATGGAGACCGCAGAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGgaagaa > 1:881143/1‑140 (MQ=255) ggCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGgaagaa > 1:2398149/1‑140 (MQ=255) ggCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAAAGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGGTGCTCGGCTCGCATCTGCCGGAGCATATTCACGTGATTCACAGAGCACTCGGGGgcagac > 1:2405280/1‑139 (MQ=255) aaTCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAAAAGAGCAATCGGGGGAAGAAGCTc > 2:443222/1‑140 (MQ=255) tCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACCGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTCACAGAGCACTCGGGGGAAGAAGCTCGa > 2:1584529/1‑140 (MQ=255) caccTTTATCTTGCTGGCGATTCAACTGTTCAACCGTCGCGAGACAGCACACAACCCGGGGGGGGCGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGaa < 1:2349172/140‑1 (MQ=255) cacaTTTCTCTTGCTGGCGCTTCCACAGTACAACCCGCGGGACACAGCACACATCCAGCGCGGTGGCGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGCGCAATCGGGGGAAGAAGCTCGaa < 1:191035/140‑1 (MQ=255) cacaTTTATCTTGCTGGCGATTCAACTGTCCAAACGCCTCCAGCCAGCACAACCCCCGGGGGCGGGCCGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGaa < 1:1109333/140‑1 (MQ=255) aTTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGAGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAAc < 1:2729538/140‑1 (MQ=255) aTTTATCTTGCGTGCTATTCCACTGTTCTTAGGCATGCAGACAGCACACCTCCCGGGGGGTGGGCCCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAAc < 2:392309/140‑1 (MQ=255) atATCTTGCTCGCGACTCAACTGATCCACCGTCTCGCCACACCACAAAACCCGGGGCGGCGCGGCAGGTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACAt < 1:857603/139‑1 (MQ=255) ttgtGCTGGCGATTCAACTTTTCATACTTATGGTGAGTGAACCAATCTTGGGGGGTGGGCGAAGTTTCTCGGCTCGCATCTGCCGGATCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTtg < 2:916849/137‑1 (MQ=255) cTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTtgt > 1:1218384/1‑140 (MQ=255) cTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTtgt > 1:167176/1‑140 (MQ=255) cTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTtgt > 1:698935/1‑140 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAATGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACAGTTGTGGaa > 1:3029522/1‑140 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGag > 2:2253372/1‑139 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa > 1:2603376/1‑140 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa > 2:2816877/1‑140 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa > 2:2816889/1‑140 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa > 1:1008487/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 1:1383705/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 1:522943/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 1:523153/1‑140 (MQ=255) cctctGGAGACAGCACACATCCAGGTGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGCGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGAtt < 2:2801174/136‑1 (MQ=255) cGTATGGAGCCACCCCCAATCTCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGAtt < 2:146000/140‑1 (MQ=255) tGGAGACAGCACTAGTCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 1:3102594/1‑140 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 1:2865994/1‑140 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 2:2669155/1‑140 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 2:119523/1‑140 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 1:2177945/1‑140 (MQ=255) gacacacCACAACTCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTAAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGAt < 2:18100/137‑1 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGACGAGGGCAGGCTTCAGGCGATTCTGGAGGGGAt > 2:1773033/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:662314/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:1925926/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:965775/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:990477/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:1231338/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:1353333/1‑46 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGGGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 2:63090/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:2660540/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 2:3012720/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 2:73986/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 2:1285113/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:444235/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 2:2352320/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:445756/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:2540741/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 2:234450/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGCCTTCAGGCGATTCTTGATGTGATTg > 2:3011893/1‑140 (MQ=255) aTCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCg > 2:2956913/1‑140 (MQ=255) aTCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCg > 2:739890/1‑140 (MQ=255) aTCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCg > 2:1233498/1‑140 (MQ=255) | CACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATG‑AGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCGG > NZ_CP034943/755392‑755667 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |