| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 266,830 | T→A | 7.3% | I45I (ATT→ATA) | kdgD → | 5‑dehydro‑4‑deoxyglucarate dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 266,830 | 0 | T | A | 7.3% | 641.2 / 32.3 | 193 | I45I (ATT→ATA) | kdgD | 5‑dehydro‑4‑deoxyglucarate dehydratase |
| Reads supporting (aligned to +/- strand): ref base T (94/82); new base A (7/7); total (103/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.49e-01 | |||||||||||
Only 100 of 197 total aligned reads displayed.
TGATGAGCCGTATGAGAAAAGCACCCGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGGGCGGCAACCTCAGTACAGCACT > NZ_CP034943/266694‑266967 | tgatgaGCCGTATGAGAAAAGCACCCGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGTAGGCTTGGAAGCGAttttt > 2:2152399/1‑140 (MQ=255)tgatgaGCCGTATGAGAAAAGCACCCGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGAttttt > 2:3033796/1‑140 (MQ=255) atgaGCCGTATGAGAAAAGCACCCGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTAt > 1:2434714/1‑140 (MQ=255) atgaGCCGTATGAGAAAAGCACCCGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTAt > 1:2774237/1‑140 (MQ=255) atgaGCCGTATGAGAAAAGCACCCGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTAt < 1:1502898/140‑1 (MQ=255) atgaGCCGTATGAGAAAAGCACCCGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTAt > 1:1027872/1‑140 (MQ=255) tgaGCCGTATGAGAAAAGCACCCGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATc < 2:692209/140‑1 (MQ=255) gaGCCGTATGAGAAAAGCACCAGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCTAGTTTTTGGGGGAAGAAGGCTTCGAAGCGATTTTTATCg > 2:2422694/1‑140 (MQ=255) ccGTATGAGAAAAGCACCCGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCtt > 1:87343/1‑140 (MQ=255) cGTATGAGAAAAGCACCCGCTGGAATCTTAGGTTTTCCGGGTGCACCTTTTAACTCACAAGTAAAACTGGCGGAAGAAGCTCTTTTTCAAAATCTCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTtg > 2:205659/1‑140 (MQ=255) tATGAGAAAAGCACCCGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTtgtg > 2:928418/1‑140 (MQ=255) tATGAGAAAAGCACCCGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTtgtg > 2:2720856/1‑140 (MQ=255) agaAAAGCACCCGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTc < 1:166437/140‑1 (MQ=255) aaGCACCCGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGt > 2:2665848/1‑140 (MQ=255) gCACCCGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGa > 1:60340/1‑140 (MQ=255) ccGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTtg < 2:1500792/124‑1 (MQ=255) gCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCa > 2:805667/1‑140 (MQ=255) aTCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAAtctct < 1:672158/140‑1 (MQ=255) ggTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCa > 2:3018202/1‑140 (MQ=255) tCCGGTTGCTCCTTTTAACACACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAACATTGAGTTTTTGCTGAATGAGGGCTTGGAAGCGATATTTATCGCTTGCGGGTCTGGTGAATTCCAATCTCTCAGCCagaagg > 2:1230601/1‑138 (MQ=255) tCCGGTTGCTCCTTTTAACACACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAACATTGAGTTTTTGCTGAATGAGGGCTTGGAAGCGATATTTATCGCTTGCGGGTCTGGTGAATTCCAATCTCTCAGCCagaagg > 2:159442/1‑138 (MQ=255) tCCGGTTGCTCCTTTTAACACACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAACATTGAGTTTTTGCTGAATGAGGGCTTGGAAGCGATATTTATCGCTTGCGGGTCTGGTGAATTCCAATCTCTCAGCCagaagg > 2:489429/1‑138 (MQ=255) tCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCagaaag > 2:144456/1‑140 (MQ=255) tCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCagaaag > 2:2135580/1‑140 (MQ=255) tCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCaga > 1:2868433/1‑137 (MQ=255) tCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCaga < 2:2868433/137‑1 (MQ=255) tCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCaga < 2:2815567/137‑1 (MQ=255) tGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATa > 1:1549002/1‑138 (MQ=255) ccTTTTAACTCACAAGGAACACTGGAGGAAGCAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTTGAAGCGATTTTTATCGCTTGTGTGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCa < 1:1619081/140‑1 (MQ=255) tttAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAAt > 1:2560555/1‑140 (MQ=255) acaAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGTAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAg > 2:1565189/1‑140 (MQ=255) acaAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGACTACGAGCAAATGGTGGAAg > 1:2926121/1‑140 (MQ=255) acaAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAg > 1:891750/1‑140 (MQ=255) acaAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAg > 2:2646031/1‑140 (MQ=255) acaAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAg > 1:1493489/1‑140 (MQ=255) acaAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAg > 2:240483/1‑140 (MQ=255) acaAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGACAGAAAGAATACGAGCAAATGGTGGAAg > 1:1870285/1‑140 (MQ=255) aaGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCaaa > 1:2828769/1‑129 (MQ=255) aaGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCaaa > 1:2333430/1‑129 (MQ=255) aaGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTc > 1:1354903/1‑140 (MQ=255) aaGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTc < 2:477498/140‑1 (MQ=255) aaGGAAAAATTGATTATGTAGCTCTTTTTAAAAATATCGAGTTTTTGGTGGAATAAGTATTGTAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAATAATACGAGCAAATGTTGGAAGTc < 2:2140593/140‑1 (MQ=255) ggaggaAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCgg > 1:368989/1‑140 (MQ=255) ggaggaAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTGGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCgg > 1:1328902/1‑140 (MQ=255) ggaAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCTGCCAGAAAGAATACGAGCAAATGGTGGAAGTAGCACTCTCGGCAg > 2:2340399/1‑140 (MQ=255) ggaAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAg > 2:239861/1‑140 (MQ=255) ggaAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAg > 1:1989628/1‑140 (MQ=255) ggaAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGAGTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAg > 2:2345765/1‑140 (MQ=255) ggaAGAAGCTCTTTTTAAAAATATCGAGTTTGTGGTGTAAGAAGTCTTGGAAGAGATTTTTATCGCTTGTGGTTCTGGTGAATTTCAATCTCTCATCAAGAAAGAATAAGAGCAAATCGTGGAAGTCTCAATATCGGAAg > 2:1151342/1‑140 (MQ=255) gaagaaGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGc > 2:1208887/1‑140 (MQ=255) gaagaaGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGc > 2:2490601/1‑140 (MQ=255) gaagaaGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGc > 2:2011957/1‑140 (MQ=255) gaagaaGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGc > 1:329375/1‑140 (MQ=255) gaagCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCgg > 1:503408/1‑140 (MQ=255) ctctTTTTCAAAATCTCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCggagga > 1:707622/1‑140 (MQ=255) ctctTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCggagga > 2:417215/1‑140 (MQ=255) tctTTTTCAAAATATCGTGTTTTTTGTTGAAGTATGCTTTGAAGCTATTTTTATCGCTTGTTGTTATGGTGAATTTCAATCTCTCAGGCAGAAAGAATACTAGCAAATGGTGGTAGTAGCAATCTCGGCAGCCGTTGGaa < 2:1232784/140‑1 (MQ=255) tctTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGaa < 1:3018202/140‑1 (MQ=255) tctTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGaa < 2:855500/140‑1 (MQ=255) tttttCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAg > 2:1706522/1‑140 (MQ=255) tttttCAAAATATCGAGTTTTGGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAg > 2:2326173/1‑140 (MQ=255) tCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTc < 2:826888/140‑1 (MQ=255) tCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTc < 2:2002984/140‑1 (MQ=255) aaaaTATCTAGTTTTTGGTTGAAGAATGATTGTAAGCGATTTTTATCGATTGTTGGTCTGGTGAATTTAAATCTCTCTTCAAGATATAATACGAGCAATTGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCg < 2:1027872/140‑1 (MQ=255) aaaaTATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTTAATTTCAATCTCTCAGCCATAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCg < 2:2434714/140‑1 (MQ=255) aaTCTCGAGTTTTTGGTGGAAGAAGGCTTGGAAGAGATTTTTATCTCTTGTGGGTCTGTTTAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGCTTCCGGt < 1:205764/140‑1 (MQ=255) aaTATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGt < 2:503408/140‑1 (MQ=255) aaTATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGt < 1:2702875/140‑1 (MQ=255) aaTATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGt < 1:1240321/140‑1 (MQ=255) tCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCACATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTac > 2:723396/1‑140 (MQ=255) tCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTac > 2:308736/1‑140 (MQ=255) ccagatgttGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTaca < 2:295893/133‑1 (MQ=255) cGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTaca < 2:1989628/140‑1 (MQ=255) cGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTaca < 1:3045425/140‑1 (MQ=255) gaagaaGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCACATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGggcgg > 2:131201/1‑140 (MQ=255) cagaagGCTTGGAAGCGATTATTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGggcggc < 2:1821656/139‑1 (MQ=255) aagaagGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGggcggc < 1:47438/140‑1 (MQ=255) aagaagGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGggcggc < 1:1610417/140‑1 (MQ=255) aagaagGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGggcggc < 1:805667/140‑1 (MQ=255) aagaagGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGggcggc < 1:2132067/140‑1 (MQ=255) aagaagGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGggcggc < 1:1937247/140‑1 (MQ=255) aagaagGCTTGGAAGAGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGggcggc < 1:1203821/140‑1 (MQ=255) aagaagGCGTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATGTCACTCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGggcggc < 1:2140972/140‑1 (MQ=255) aagGCTTGGAAGCTATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGGGCGGCAAc < 1:1697167/140‑1 (MQ=255) ggCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGGGCGGCAACCt < 1:239446/140‑1 (MQ=255) ggCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGGGCGGCAACCt < 1:2418420/140‑1 (MQ=255) ggCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGGGCGGCAACCt < 1:2665848/140‑1 (MQ=255) ggCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGGGCGGCAACCt < 1:2997327/140‑1 (MQ=255) ggCTTGGAAGCGATATTTATCGCTTGCGGGTCTGGTGAATTCCAATCTCTCAGCCAGAAGGAATATGAGCAAATGGTGGAAGTCGCAGTCTCGGCAGCCGGAGGAAAGGTGCCGGTCTACACGGGGGTGGGCGGCAACCt < 1:2419981/140‑1 (MQ=255) ggCTTGGAAGCGATATTTATCGCTTGCGGGTCTGGTGAATTCCAATCTCTCAGCCAGAAGGAATATGAGCAAATGGTGGAAGTCGCAGTCTCGGCAGCCGGAGGAAAGGTGCCGGTCTACACGGGGGTGGGCGGCAACCt < 1:1230601/140‑1 (MQ=255) ggAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGGGCGGCAACCTCAGTa < 1:1410098/140‑1 (MQ=255) ggAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGGGCGGCAACCTCAGTa < 1:417215/140‑1 (MQ=255) ggAAGCGATGTTTATCGCTTGTGGGTCTGGAGAATTTCAATCTCTCACCCTGAAAGAATACGAGCAGATGGTGGAAGTCGCAATCTCGGCAGCCGGCGGAAAGGTTCCGGTTTACACGGGGGTGGGCGGCAACCTCAGTa < 2:2739906/140‑1 (MQ=255) aaGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGGGCGGCAACCTCAGTACa < 1:928418/140‑1 (MQ=255) aaGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGGGCGGCAACCTCAGTACa < 1:73922/140‑1 (MQ=255) aaGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGGGCGGCAACCTCAGTACa < 1:251172/140‑1 (MQ=255) cGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGGGCGGCAACCTCAGTACAGCa > 2:2670529/1‑140 (MQ=255) aTTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGc > 2:1618773/1‑86 (MQ=255) aTTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGGGCGGCAACCTCAGTACAGCACt > 1:1033954/1‑140 (MQ=255) aTTTTTATCGCTTGAGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGGGCGGCAACCTCAGTACAGCACt > 1:2710384/1‑140 (MQ=255) | TGATGAGCCGTATGAGAAAAGCACCCGCTGGAATCTTAGGTTTTCCGGTTGCACCTTTTAACTCACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAATATCGAGTTTTTGGTGGAAGAAGGCTTGGAAGCGATTTTTATCGCTTGTGGGTCTGGTGAATTTCAATCTCTCAGCCAGAAAGAATACGAGCAAATGGTGGAAGTCGCAATCTCGGCAGCCGGAGGAAAGGTTCCGGTTTACACGGGGGTGGGCGGCAACCTCAGTACAGCACT > NZ_CP034943/266694‑266967 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |