| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 871,787 | T→C | 5.2% | I321T (ATC→ACC) | EO946_RS04420 → | ABC transporter ATP‑binding protein/permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 871,787 | 0 | T | C | 5.2% | 379.3 / 6.1 | 113 | I321T (ATC→ACC) | EO946_RS04420 | ABC transporter ATP‑binding protein/permease |
| Reads supporting (aligned to +/- strand): ref base T (39/68); new base C (3/3); total (42/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 117 total aligned reads displayed.
TTATTAACTACGCAACACGAATTACGGGTGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGCCGAGGGAAACGATCGCGATTCTCGGTGCGACGGGA > NZ_CP034943/871649‑871926 | ttattaACTACGCAACACGAATTACGGGTGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGcatc < 2:2198422/140‑1 (MQ=255) cgccagacGAATTCCGGGTGCGCGTTCGATGTTTCCGTTTTTGATGATGATTTTGACTAGGGCGAAGGCTTCAGGTTATTGAATCGGCGAGGTGCTTGTAAATGAAGGCGATGAGCGGGAGGAAGGGATCATATCTGATc < 2:312256/134‑1 (MQ=255) cGCAACACGAATTACGGGTGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATc > 1:2259582/1‑140 (MQ=255) cGCAACACGAATTACGGGTGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATc > 1:1317089/1‑140 (MQ=255) cGCAACACGAATTACGGGTGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATc > 2:709195/1‑140 (MQ=255) cGCAACACGAATTACCGGCGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACCCGGGCGAAGGCTTCAGGGGATAGAATCGGTGAGGTGCTTGAAACAGAAGGCGACGAGCGGGAGGAAGGCACCATATCTGATc > 2:2196015/1‑140 (MQ=255) cGCAACACGAATTACAGGCGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACCCGGGCGAAGGCTTCAGGGGATAGAATCGGTGAGGTGCTTGAAACAGAAGGCGACGAGCGGGAGGAAGGCACCATATCTGATc > 2:520159/1‑140 (MQ=255) gCAACACGAATTACGGGTGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCg < 2:481262/140‑1 (MQ=255) cAACACGAATTACGGGTGCGCTTTCGATGTTTCCGTTTTTGATTCTGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGGAGGCATCATATCTGATCgg > 2:1603796/1‑139 (MQ=255) cAACACGAATTACGGGTGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCCGGTGATAGAAACGGCGAGGTTATTGAAACGGAAGGCGATGAGCGGGAGGAAGGCTTCATATCTGATCgg > 2:122242/1‑139 (MQ=255) cAACACGAATTACGGGTGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGt > 1:1519291/1‑140 (MQ=255) cGAATTACGGGTGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTc < 2:2216201/140‑1 (MQ=255) atgaCGGGTGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCggg < 1:662568/137‑1 (MQ=255) aTTCCGGGTGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCggg < 1:2636610/140‑1 (MQ=255) aTTACGGGTGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCggg < 1:1612758/140‑1 (MQ=255) aTTACGGGTGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCAATAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCggg < 2:1346570/140‑1 (MQ=255) gggTGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGggagga < 2:742207/140‑1 (MQ=255) gggTGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGggagga < 2:742266/140‑1 (MQ=255) tGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTg > 2:2878383/1‑140 (MQ=255) gcgcTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGa < 2:2259582/140‑1 (MQ=255) cgcTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAg > 1:1016444/1‑140 (MQ=255) cgcTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAg > 1:2195555/1‑140 (MQ=255) cgcTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAg > 1:1574618/1‑140 (MQ=255) cgcTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAg > 1:1097147/1‑140 (MQ=255) cgcTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAg > 1:1017627/1‑140 (MQ=255) cTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGtt > 1:1557360/1‑140 (MQ=255) tttCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGttt < 2:1310014/140‑1 (MQ=255) tttCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGttt < 2:1016444/140‑1 (MQ=255) tttCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGttt < 2:1582091/140‑1 (MQ=255) tttCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGttt < 2:1160237/140‑1 (MQ=255) tttCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGttt < 2:1137529/140‑1 (MQ=255) tttCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGttt < 2:281557/140‑1 (MQ=255) tttCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGttt < 2:281558/140‑1 (MQ=255) tttCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGttt < 1:2749055/140‑1 (MQ=255) tttCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGttt < 1:2383183/140‑1 (MQ=255) tttCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGttt < 1:2031822/140‑1 (MQ=255) tttCGATGTTGCCGTGTGTGAGTCTGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGGGCTTGAACCGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGttt < 2:1778499/140‑1 (MQ=255) tttCGATGCTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGttt < 2:284425/140‑1 (MQ=255) gTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATg < 1:1402390/140‑1 (MQ=255) gTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATg < 1:1202834/140‑1 (MQ=255) tCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTAt > 1:283462/1‑140 (MQ=255) tCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTAt > 1:2516775/1‑140 (MQ=255) tCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTAt > 2:3102139/1‑140 (MQ=255) tCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTAt > 1:222001/1‑140 (MQ=255) cGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGCTCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATcc < 2:1322257/140‑1 (MQ=255) cGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATcc < 1:402818/140‑1 (MQ=255) cGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATcc < 2:1316652/140‑1 (MQ=255) ttGTTTATGATATTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCg < 1:2769785/140‑1 (MQ=255) ttGATTATGATTTTCACTAGGGCGAAGGCTTCAGTTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCg < 2:106853/140‑1 (MQ=255) ttGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCg < 1:58075/140‑1 (MQ=255) ttGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCg < 2:1981210/140‑1 (MQ=255) ttGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCg < 1:57919/140‑1 (MQ=255) ttGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCg < 1:2936143/140‑1 (MQ=255) ttGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCg < 1:218676/140‑1 (MQ=255) ttGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCg < 2:596104/140‑1 (MQ=255) tATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATc < 1:2796606/140‑1 (MQ=255) tGATTTTCACTAGGGCGCAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCt < 2:1614831/140‑1 (MQ=255) ttttCACGAGGGCGATTGATTCAGGTGATAGAATCGGCTAGGTGCTTGAAACGGAAGGGGATGAGAGGGAGGAAGGCATCATATCGGATAGTTTGTCGGGGAGGATTGAGTTTGAGGATGTATCCTTGCGTTATCCTGat < 2:134570/140‑2 (MQ=255) tCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATg > 2:1817384/1‑140 (MQ=255) aCTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGa < 1:1682701/140‑1 (MQ=255) aCTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGa < 2:22553/140‑1 (MQ=255) aCTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGa < 1:3102139/140‑1 (MQ=255) cAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCgg > 1:2119865/1‑140 (MQ=255) cAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCgg > 1:45491/1‑140 (MQ=255) aGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGa < 1:2804369/140‑1 (MQ=255) aGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGa < 2:2528970/140‑1 (MQ=255) aGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGa < 2:2444452/140‑1 (MQ=255) aGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGa < 2:1568964/140‑1 (MQ=255) aGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGACGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGa < 2:2830062/140‑1 (MQ=255) aTAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGcat > 1:447377/1‑52 (MQ=255) aTAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGcat < 2:447377/52‑1 (MQ=255) aTAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGtc > 1:490762/1‑140 (MQ=255) aTAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGta > 2:2259319/1‑139 (MQ=255) aTAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTGTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACACAGAAGCGCTGCGGAATGtc > 2:1073797/1‑140 (MQ=255) aGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGtctc > 2:2658828/1‑140 (MQ=255) aGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGtctc > 2:2769950/1‑140 (MQ=255) ctCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCAtt < 2:1469726/139‑1 (MQ=255) aTCGGCGAGGTGCCTGAAACGGACGGCGAGGAGCGGGAGGACGGCATCATATCTGATCGTTTGTCGGGGAGGATTGTGTTTCAGCATGTCTCCTTCCGTTATCCTGAAATGGACATAGAAGCGCTGCGGAATGTCTCAtt < 2:1471345/140‑1 (MQ=255) aacgCGAGGTGCTTGAAACGGAATTAAATGAGAGGTAGGAAGTCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCAttt > 2:2099685/4‑140 (MQ=255) ggCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTc > 2:474439/1‑140 (MQ=255) aGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCa < 2:423198/140‑1 (MQ=255) aGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCa < 2:420988/140‑1 (MQ=255) aGGTGCTTGAAACAGAAGGCGACGAGCGGGAGGAAGGCACCATATCTGATCGTTTGTCAGGACGGATTGAGTTTCAGCATGTATCCTTTCGCTATCCTGAAATGGACAGAGAAGCGCTCAGGAATGTCTCATTTTCCGCa < 1:520159/140‑1 (MQ=255) gTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCaaa > 1:2371641/1‑140 (MQ=255) ggAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTAATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGCCGAGGGaaa > 1:789301/1‑140 (MQ=255) aTGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGACGAGGGAAACGATc < 2:3075674/137‑1 (MQ=255) aTGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGACGAGGGAAACGATc > 1:3075674/1‑137 (MQ=255) aTGAGCGGGAGGAAGGCATCATATCGGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGCCGAGGGAAACGATcgcg < 2:892760/140‑1 (MQ=255) cGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGCCGAGGGAAACGATCGCGATtct < 1:2007964/140‑1 (MQ=255) cGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGCCGAGGGAAACGATCGCGATtct < 1:2007284/140‑1 (MQ=255) ggaggaAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGCCGAGGGAAACGATCGCGATTCTCg > 2:3012091/1‑140 (MQ=255) gaggaAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGCCGAGGGAAACGATCGCGATTCTCgg < 2:1257001/140‑1 (MQ=255) aaGGCATCATATCTGCTCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCGTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGCCGAGGGAAACGATCGCGATTCTCGGTGCg < 2:568102/140‑1 (MQ=255) aGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGCCGAGGGAAACGATCGCGATTCTCGGTGCGa > 2:2882925/1‑140 (MQ=255) aGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGCCGAGGGAAACGATCGCGATTCTCGGTGCGa > 2:1983979/1‑140 (MQ=255) aGGCATCATATCTGATCGTGTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGCCGAGGGAAACGATCGCGATTCTCGGTGCGa < 2:2375165/140‑1 (MQ=255) ggCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACCGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGCCGAGGGAAACGATCGCGATTCTCGGTGCGAc > 2:1732231/1‑140 (MQ=255) ggCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGCCGAGGGAAACGATCGCGATTCTCGGTGCGAc > 2:2707752/1‑140 (MQ=255) gCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCACAGCCGAGGGAAACGATCGCGATTCTCGGTGCGACg > 2:803086/1‑140 (MQ=255) tcatATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGCCGAGGGAAACGATCGCGATTCTCGGTGCGACGGGa > 1:1704408/1‑140 (MQ=255) | TTATTAACTACGCAACACGAATTACGGGTGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACTAGGGCGAAGGCTTCAGGTGATAGAATCGGCGAGGTGCTTGAAACGGAAGGCGATGAGCGGGAGGAAGGCATCATATCTGATCGTTTGTCGGGGAGGATTGAGTTTCAGCATGTATCCTTCCGTTATCCTGAAATGGACAGAGAAGCGCTGCGGAATGTCTCATTTTCCGCAAAGCCGAGGGAAACGATCGCGATTCTCGGTGCGACGGGA > NZ_CP034943/871649‑871926 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |