| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,136,748 | T→C | 5.5% | F172F (TTT→TTC) | EO946_RS05840 → | AraC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,136,748 | 0 | T | C | 5.5% | 673.8 / 17.2 | 203 | F172F (TTT→TTC) | EO946_RS05840 | AraC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (65/125); new base C (5/6); total (70/133) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 207 total aligned reads displayed.
AAGGCAAGGTGCAGCGCCCGCAGTTTATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTATCATCAGGATTATGTGAGCCGCTGCATGCAGC > NZ_CP034943/1136609‑1136887 | aaGGCAAGGTGCAGCGCCCGCAGTTTATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGttt < 2:2266706/140‑1 (MQ=255) aGGTGCAGCGCCCGCAGTTTATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAAtt > 1:1137725/1‑140 (MQ=255) gTGCAGCGCCCGCAGTTTATGGCGCAGCAGTTTGAAAAGCTGATCGATTACTCCGCGGAAAACTCTGATTTGCCGCTCAGAAAGCAAATTTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAAGCGTTCCAAATTcc > 1:95844/1‑140 (MQ=255) gTGCAGCGCCCGCAGTTTATGGCGCAGCAGTTTGAAAAGCTGATCGATTACTCCGCGGAAAACTCTGATTTGCCGCTCAGAAAGCAAATTTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAAGCGTTCCAAATTcc > 1:188794/1‑140 (MQ=255) gTGCAGCGCCCGCAGTTTATGGCGCAGCAGTTTGAAAAGCTGATCGATTACTCCGCGGAAAACTCTGATTTGCCGCTCAGAAAGCAAATTTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAAGCGTTCCAAATTcc > 1:1767679/1‑140 (MQ=255) gTGCAGCGCCCGCAGTTTATGGCGCAGCAGTTTGAAAAGCTGATCGATTACTCCGCGGAAAACTCTGATTTGCCGCTCAGAAAGCAAATTTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAAGCGTTCCAAATAcc > 1:1572905/1‑140 (MQ=255) aGCGCCCGCAGTTTATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCt > 2:1566172/1‑140 (MQ=255) aGCGCCCGCAGTTTATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCt > 2:2296355/1‑140 (MQ=255) aGCGCCCGCAGTTTATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCt > 2:2465913/1‑140 (MQ=255) aGCGCCCGCAGTTTATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCt > 2:672270/1‑140 (MQ=255) gCAGTTTATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAag > 2:2154482/1‑140 (MQ=255) gCAGTTTATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAag > 2:368190/1‑140 (MQ=255) gCAGTTTATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAag > 2:808112/1‑140 (MQ=255) cAGTTTATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAaga < 1:2296355/140‑1 (MQ=255) ttATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCgg < 2:1387534/140‑1 (MQ=255) ttATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCgg < 2:1297666/140‑1 (MQ=255) ttATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCgg < 2:1661026/140‑1 (MQ=255) ttATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCgg < 2:1014590/140‑1 (MQ=255) ttATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCgg < 2:438079/140‑1 (MQ=255) ttATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCgg < 2:875754/140‑1 (MQ=255) tATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAACACTCTGATTTGCCGCTTAGCAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCggg < 2:2830654/140‑1 (MQ=255) tATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAACACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCggg < 2:2081263/140‑1 (MQ=255) gagggCGCCGCAGTTTGAAAGGCTGATAGATTACTCCGCCGACAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCggg < 2:2041490/137‑1 (MQ=255) aTGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGt < 1:1361494/140‑1 (MQ=255) aTGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGt < 1:2157670/140‑1 (MQ=255) tGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTa > 1:1045520/1‑140 (MQ=255) tGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTa > 1:2882371/1‑140 (MQ=255) tGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTa > 1:2368254/1‑140 (MQ=255) tGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTGTCAAATTCCGTCTGCGAAAGAGCGGGTa > 1:2778555/1‑140 (MQ=255) agcagTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTgg > 2:1844271/1‑140 (MQ=255) agcagTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTgg > 1:1810766/1‑140 (MQ=255) agcagTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTgg > 1:3076079/1‑140 (MQ=255) agcagTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTgg > 1:241542/1‑140 (MQ=255) cagTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGa > 2:2460298/1‑140 (MQ=255) gTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAgg < 2:2619501/140‑1 (MQ=255) gTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAgg < 2:744149/140‑1 (MQ=255) aaaGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGcc < 2:271515/140‑1 (MQ=255) aaaGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGcc < 2:1251762/140‑1 (MQ=255) aaaGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGcc < 2:292681/140‑1 (MQ=255) aaaGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGcc < 2:917514/140‑1 (MQ=255) aaaGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGcc < 1:434333/140‑1 (MQ=255) aaaGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGcc < 1:2031857/140‑1 (MQ=255) aaaGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGcc < 1:2841732/140‑1 (MQ=255) aaaGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGcc < 1:1976284/140‑1 (MQ=255) aaaGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGcc < 1:2431575/140‑1 (MQ=255) aaaGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGGTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGcc < 2:1528665/140‑1 (MQ=255) aGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCg < 1:318215/140‑1 (MQ=255) aGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCg < 2:241542/140‑1 (MQ=255) aGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCg < 1:839378/140‑1 (MQ=255) aGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCg < 1:822122/140‑1 (MQ=255) aGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCg < 1:1578328/140‑1 (MQ=255) aGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCg < 1:1699629/140‑1 (MQ=255) aGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCg < 1:1199242/140‑1 (MQ=255) aGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCg < 1:2917970/140‑1 (MQ=255) aGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCg < 1:2150400/140‑1 (MQ=255) aGGCTGATAGATTACTCCGATGAAAAGTCTTATTTGCCGCTGAGAAAGCAAATCTTATTTGAGGAGCTGATGCTTCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCg < 2:1397903/140‑1 (MQ=255) tACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGa > 1:480384/1‑140 (MQ=255) aCTCCGCGGAAAACTCTGAGTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAg < 2:2589546/140‑1 (MQ=255) cgcgGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCCtt > 1:2187606/1‑140 (MQ=255) cgcgGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCAtt > 1:921489/1‑140 (MQ=255) cgcgGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCAtt > 2:2243423/1‑140 (MQ=255) cgcgGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCAtt > 1:1843502/1‑140 (MQ=255) cgcgGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCAtt > 1:2490342/1‑140 (MQ=255) cgGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAaga > 2:648864/1‑97 (MQ=255) cgGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAaga < 1:648864/97‑1 (MQ=255) cgGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATtat > 2:2362617/1‑140 (MQ=255) ccGCTTAGAAAGCAACTCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAAt < 2:1842668/140‑1 (MQ=255) ccGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAAt < 2:2802358/140‑1 (MQ=255) ccGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTACAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAAt < 2:3055438/140‑1 (MQ=255) aTCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTctcgct < 1:2066648/140‑1 (MQ=255) aTCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATCATAAGGAAAAGACGACAATCAAAGATCTctcgct < 2:940627/140‑1 (MQ=255) tCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAAGTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTctcgctc < 2:1220068/140‑1 (MQ=255) cTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTctcgctcg < 2:2972307/140‑1 (MQ=255) cTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTctcgctcg < 1:1236140/140‑1 (MQ=255) cTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTctcgctcg < 1:2119067/140‑1 (MQ=255) tATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGcc < 2:1137725/140‑1 (MQ=255) ttGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCtt < 2:344607/140‑1 (MQ=255) ttGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCtt < 2:1779713/140‑1 (MQ=255) ggagCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACt < 1:2124598/140‑1 (MQ=255) gagCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTa > 2:1730212/1‑140 (MQ=255) gagCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTa > 2:157292/1‑140 (MQ=255) cTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTatca > 2:599322/1‑140 (MQ=255) tGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTatcat < 1:2243423/140‑1 (MQ=255) tGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTatcat < 1:3020458/140‑1 (MQ=255) tGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGAGGCCCGGTAATTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATATCTCGCTCGCCCATCACAatcaa > 2:1235309/1‑139 (MQ=255) ctgcATCTTCAAAAAGAGGCGTTTCAAAGTCCGTCTGCGAAAGAGCGGGTAGCCTGGGCGGCGGCCCGGTACATACAGGAGCATTATAAGGAAAAGACGACAATCAAAGAACTCTCGCTCGCCCTTCACTATCATCAGGa < 2:2448764/140‑1 (MQ=255) gcATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTATCATCAGGAtt > 2:500258/1‑140 (MQ=255) cATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAg > 1:1412959/1‑75 (MQ=255) aTCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTATCATCAGGATTAt < 2:2187606/140‑1 (MQ=255) ttCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTATCATCAGGATTAtgtg > 1:2152245/1‑140 (MQ=255) aaaaaGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACGATCATCAGGCTTATGTGAGc > 1:2055161/1‑140 (MQ=255) aaaaaGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCAGTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTATCATCAGGATTATGTGAGc > 1:1522550/1‑140 (MQ=255) caagaagCGTTCCAAAGTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTATCATCAGGATTATGTGAGCCg < 2:188794/139‑1 (MQ=255) agGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTatcat < 2:2123954/119‑1 (MQ=255) agGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTatcat < 2:2386129/119‑1 (MQ=255) ggCGTTTCAAATTCCGTCTGCGACAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTATCATCAGGATTATGTGAGCCGCtgca < 2:2882371/140‑1 (MQ=255) ggCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTATCATCAGGATTATGTGAGCCGCtgca < 1:377/140‑1 (MQ=255) ggCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTATCATCAGGATTATGTGAGCCGCtgca < 2:2778555/140‑1 (MQ=255) gTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTATCATCAGGATTATGTGAGCCGCtgcatgc > 1:574989/1‑140 (MQ=255) tCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTATCATCAGGATTATGTGAGCCGCTGCATgcagc < 1:599322/140‑1 (MQ=255) | AAGGCAAGGTGCAGCGCCCGCAGTTTATGGCGCAGCAGTTTGAAAGGCTGATAGATTACTCCGCGGAAAACTCTGATTTGCCGCTTAGAAAGCAAATCTTATTTGAGGAGCTGATGCTGCATCTTCAAAAAGAGGCGTTTCAAATTCCGTCTGCGAAAGAGCGGGTAGCCTGGGAGGCGGCCCGGTACTTACAGGAGCATTATAAGGAAAAGACGACAATCAAAGATCTCTCGCTCGCCCTTCACTATCATCAGGATTATGTGAGCCGCTGCATGCAGC > NZ_CP034943/1136609‑1136887 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |