| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,347,648 | T→C | 5.2% | Y178Y (TAT→TAC) | purU → | formyltetrahydrofolate deformylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,347,648 | 0 | T | C | 5.2% | 646.5 / 16.6 | 193 | Y178Y (TAT→TAC) | purU | formyltetrahydrofolate deformylase |
| Reads supporting (aligned to +/- strand): ref base T (63/120); new base C (5/5); total (68/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.60e-01 | |||||||||||
Only 100 of 205 total aligned reads displayed.
TCGCTGTTGTCATCAGCAACCATGAGGAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTGCGAATCCATACAAACGGGCT > NZ_CP034943/1347512‑1347786 | tCGCTGTTGTCTTCAGCAACCATGAGGAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATgag < 1:1428702/140‑1 (MQ=255) gttgtCATCAGCAACCATGAGGAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGa < 1:2592253/140‑1 (MQ=255) atcaGCAACCATGAGGAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGAt > 2:678783/1‑140 (MQ=255) atcaGCAACCATGAGGAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGAt > 2:1715890/1‑140 (MQ=255) cATGAGGAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGc < 2:2602919/140‑1 (MQ=255) tGAGGAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCAc < 1:1783228/140‑1 (MQ=255) gAGGAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACg < 1:1007610/140‑1 (MQ=255) gAGGAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACg < 2:1182517/140‑1 (MQ=255) gAGGAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACg < 2:1664274/140‑1 (MQ=255) gAGGAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACg < 1:57348/140‑1 (MQ=255) gAGGAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACg < 1:3091076/140‑1 (MQ=255) gAGGAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACg < 2:1936811/140‑1 (MQ=255) ggAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCt < 2:1049680/140‑1 (MQ=255) cgAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCt < 1:2452425/139‑1 (MQ=255) gAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCg > 1:244366/1‑127 (MQ=255) gAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCg < 2:244366/127‑1 (MQ=255) gCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTatat > 1:1927594/1‑140 (MQ=255) cGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATg < 1:1798542/140‑1 (MQ=255) agagaACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCa < 1:1240750/140‑1 (MQ=255) agagaACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCa < 1:1987015/140‑1 (MQ=255) agaACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATg < 1:2074360/136‑1 (MQ=255) aCTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCACTATGAGATTGATACGATCGTGCTTGCACGCTATATGcctgtct > 2:1472016/1‑134 (MQ=255) tGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTa < 1:2717832/140‑1 (MQ=255) tGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTa < 2:2854367/140‑1 (MQ=255) ggTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTaa < 2:1626209/140‑1 (MQ=255) gTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAAc > 2:2756771/1‑140 (MQ=255) gTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAAc > 1:1632820/1‑140 (MQ=255) gTTGAACGGCTGAACATTCCATTCCAGTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAAc > 1:1886499/1‑140 (MQ=255) tGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACCAACCCATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCACTATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAAccc < 1:267651/140‑1 (MQ=255) tGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACCATCGTGCTTGAACGCTATATGCATAGATTAAccc > 2:2260406/1‑140 (MQ=255) aCGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTg > 2:1430817/1‑140 (MQ=255) gcggAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCACTATGAGATTGATACGATCGTGCTGGCACGCTATATGCAGATCTTAACCCCTGACt < 2:928229/137‑1 (MQ=255) gCTGAACATTCCATTCCATTATATGAAATCAAACAAAGACATAAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACt < 2:2712440/140‑1 (MQ=255) gCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACt < 2:2352895/140‑1 (MQ=255) gCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACt < 2:555216/140‑1 (MQ=255) gCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACt < 2:1979246/140‑1 (MQ=255) ccTGAACATTCCATTCCACTATATGAAAGCGAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTGGAGCAGTACGATGTTGATGTGATCGTGCTCGCACGCTATATGCAGATTCTAACTCCTGatt > 2:549998/2‑138 (MQ=255) ccTGAACATTCCATTCCACTATATGAAAGCGAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTGGAGCAGTACGATGTTGATGTGATCGTGCTCGCACGCTATATGCAGATTCTAACTCCTGatt > 2:1137843/2‑138 (MQ=255) ccTGAACATTCCATTCCACTATATGAAAGCGAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTGGAGCAGTACGATGTTGATGTGATCGTGCTCGCACGCTATATGCAGATTCTAACTCCTGatt > 2:2106899/2‑138 (MQ=255) tGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACttt > 1:979770/1‑140 (MQ=255) tccattccatTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCGTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCgg > 2:667086/1‑140 (MQ=255) tccattccatTATATGAAAGCAAACAAAGACAACAGCGCGGAAGTCGAAAAGCAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCgg < 2:2912971/140‑1 (MQ=255) tccattaaatTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCgg < 2:1869117/140‑1 (MQ=255) cattccattATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGc < 2:83808/100‑1 (MQ=255) cattccattATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGc > 1:1645626/1‑100 (MQ=255) cattccattATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCt > 2:1667944/1‑140 (MQ=255) cattccattATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCt > 1:2082096/1‑140 (MQ=255) cattATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATcc > 1:296230/1‑140 (MQ=255) tataTGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGaa > 1:1555221/1‑140 (MQ=255) atatGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAAt < 2:21975/140‑1 (MQ=255) tatGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATc > 2:1931162/1‑140 (MQ=255) atGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGCTTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCg < 1:1525708/140‑1 (MQ=255) atGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCg < 1:1114500/140‑1 (MQ=255) atGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCg < 1:2021939/140‑1 (MQ=255) atGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCg < 1:2172032/140‑1 (MQ=255) tGAAAGCAAACAAATACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATCTGAGATTGATACGATCCTGCTTGCACGCGATATGCAGATCTTAACCCCTGACTATGGTTCGGCTCATACGAATCga > 2:2961754/1‑139 (MQ=255) tGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGc < 1:1331345/140‑1 (MQ=255) tGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGc < 1:3012875/140‑1 (MQ=255) tGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGc < 1:369251/140‑1 (MQ=255) aaaGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGcat < 2:889044/140‑1 (MQ=255) aaaGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGcat < 2:2292670/140‑1 (MQ=255) aaGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCATGACTTTGTTTCGGATCATCCGAATCGcatc > 2:1379644/1‑140 (MQ=255) gCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGACTCGcatcat > 2:1743022/1‑140 (MQ=255) gCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGcatcat > 2:1845748/1‑140 (MQ=255) aacaaaGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTaa > 1:899772/1‑140 (MQ=255) aacaaaGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTaa > 1:2761780/1‑140 (MQ=255) aacaaaGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTaa > 1:943584/1‑140 (MQ=255) aTCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATAtt > 2:574513/1‑135 (MQ=255) cAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCCTTCATATTCACCACt > 1:1619757/1‑140 (MQ=255) cAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACt < 2:3087697/140‑1 (MQ=255) cAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACt < 2:2082096/140‑1 (MQ=255) gagCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAAAATTAGATTGATAAGATCCTGCTTGCACGCTATATGCAGATCTTAACCCCAGACTTTGTTTAGGCTCATCCGAATCGCATCATTAATATTCACCACTCg > 2:177576/1‑140 (MQ=255) cGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTc > 2:2029584/1‑140 (MQ=255) aGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTcctgc < 1:1451563/140‑1 (MQ=255) aGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTcctgc < 1:3042931/140‑1 (MQ=255) aagCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTAt < 1:1667944/140‑1 (MQ=255) aagCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGATTGCACGATATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTAt < 2:753061/140‑1 (MQ=255) aagCAGCTTGAACTGCTTGAGCAATATGAGAGTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTAt < 2:1358242/140‑1 (MQ=255) aagCAGCTTGAACTGCTGGAGCAGTACGATGTTGATGTGATCGTGCTCGCACGCTATATGCAGATTCTAACTCCTGATTTTGTTTCGGCTCATCCGAATCGCATCATCAATATCCACCATTCATTCCTGCCAGCTTTTAt < 1:549998/140‑1 (MQ=255) aagCAGCTTGAACTGCTGGAGCAGTACGATGTTGATGTGATCGTGCTCGCACGCTATATGCAGATTCTAACTCCTGATTTTGTTTCGGCTCATCCGAATCGCATCATCAATATCCACCATTCATTCCTGCCAGCTTTTAt < 1:2334833/140‑1 (MQ=255) gcTTGATCTTCTTGAGCAATTTGAGATTGATACGATAGTGCTTGCACGCTATTTGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATGGCATCTTTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTg < 1:2119038/140‑1 (MQ=255) gcTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTg < 1:61827/140‑1 (MQ=255) gcTTGAACTGCTTGAGCAATATGAGATGGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTg < 1:1966797/140‑1 (MQ=255) aaCTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCTCCTCTAGTTACTGCCTGCTTTTATCGGTGCGatt < 2:458511/140‑3 (MQ=255) cTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTcaccac < 1:1362251/105‑1 (MQ=255) gAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTGCGAATCCATACaa < 2:1886499/140‑1 (MQ=255) gAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTGCGAATCCATACaa < 2:268502/140‑1 (MQ=255) gAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTGCGAATCCATACaa < 1:1430817/140‑1 (MQ=255) gAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTGCGAATCCATACaa < 2:1633331/140‑1 (MQ=255) gCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTGCGAATCCATACAAAc < 1:1931162/140‑1 (MQ=255) gCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTGCGAATCCATACAAAc > 2:3012894/1‑140 (MQ=255) gCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCGGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTGCGAATCCATACAAAc < 2:2990943/140‑1 (MQ=255) atatGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTGCGAATCCATACAAACggg > 1:1584410/1‑140 (MQ=255) atatGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTGCGAATCCATACAAACggg > 1:2571676/1‑140 (MQ=255) atatGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTGCGAATCCATACAAACggg > 1:2833723/1‑140 (MQ=255) atatGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTGCGAATCCATACAAACggg < 1:771919/140‑1 (MQ=255) atatGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTGCGAATCCATACAAACggg < 1:474610/140‑1 (MQ=255) atatGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAAGCGCAGCATTATTATTCACCACTCGTTCCTGCCTGCTTTTAGCGGTGCGAATCCATACAAACggg > 1:726008/1‑140 (MQ=255) atGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTGCGAATCCATACAAACGGGCt > 1:647593/1‑140 (MQ=255) atGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTGCGAATCCATACAAACGGGCt > 1:2497004/1‑140 (MQ=255) | TCGCTGTTGTCATCAGCAACCATGAGGAAGCGAGAGAACTGGTTGAACGGCTGAACATTCCATTCCATTATATGAAAGCAAACAAAGACATCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACTGCTTGAGCAATATGAGATTGATACGATCGTGCTTGCACGCTATATGCAGATCTTAACCCCTGACTTTGTTTCGGCTCATCCGAATCGCATCATTAATATTCACCACTCGTTCCTGCCTGCTTTTATCGGTGCGAATCCATACAAACGGGCT > NZ_CP034943/1347512‑1347786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |