| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,789,771 | C→A | 5.8% | P4386T (CCT→ACT) | EO946_RS09130 → | type I polyketide synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,789,771 | 0 | C | A | 5.8% | 422.1 / 6.8 | 154 | P4386T (CCT→ACT) | EO946_RS09130 | type I polyketide synthase |
| Reads supporting (aligned to +/- strand): ref base C (64/78); new base A (9/3); total (73/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.89e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 156 total aligned reads displayed.
CGAAGACGGAGATTCCATATATGCAGTTATTAAAGCCGCTGCTATTAACAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTGAAACCTAACA > NZ_CP034943/1789632‑1789906 | cGAAGACGGAGATTCCATATATGCAGTTATTAAAGCCGCTGCTATTAACAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGc < 1:312743/140‑1 (MQ=255) gagaTTCCATATATGCAGTTATTAAAGCCGCTGCTATTAACAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAagag < 2:642929/140‑1 (MQ=255) tatGCAGTTATTAAAGCCGCTGCTATTAACAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTAtct > 1:2687814/1‑140 (MQ=255) tatGCAGTTATTAAAGCCGCTGCTATTAACAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTAtct > 1:457543/1‑140 (MQ=255) tGCAGTTATTAAAGCCGCTGCTATTAACAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCg > 1:1403456/1‑140 (MQ=255) tGCAGTTATTAAAGCCGCTGCTATTAACAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCg > 1:2176216/1‑140 (MQ=255) attaAAGCCTCTGCTATTAACAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAATGATGACATGCAGACAGCGCTTCAAAAAAGCGGCAAAAATCCAGAACAAATCAGTTATCACCAAGCGaa > 2:3051182/1‑140 (MQ=255) attaAAGCCGCTGCTATTAACAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAag < 1:1055782/118‑1 (MQ=255) attaAAGCCGCTGCTATCAACAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGaa < 2:2699177/140‑1 (MQ=255) ttaAAGCCGCTGCTATTAACAATCACGGAAGAACAGCATCCCCATCTTCAACGAATCTCCAGGCACAAAAGGATGTCATGCACACAGCGCTTGAAAAAAGCCGCCAAAACCCAGACTAGAACAAATAACTCGaaaacact > 2:1785141/1‑134 (MQ=255) aaGCCGCTGCTATTAACAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGc < 1:453872/140‑1 (MQ=255) gCCGCTGCTATTAACAATGACGGAAGAACAGCAGGCCTATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAATCGAATGGCTc > 1:1591393/1‑140 (MQ=255) gCCGCTGCTATTAACAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTc > 1:51021/1‑140 (MQ=255) ctgctATTAACAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGa > 1:460683/1‑140 (MQ=255) ctgctATTAACAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTCAAGAGATAAGTTATCACGAAGCGAAAGGCTCGGGa > 2:171685/1‑140 (MQ=255) aTTAACAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGc < 1:1596470/140‑1 (MQ=255) cAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTaa < 2:2171662/140‑1 (MQ=255) tGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCCCAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCGGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAg > 1:2507799/1‑140 (MQ=255) tGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGACAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAg > 1:1759004/1‑140 (MQ=255) tGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAg > 1:1891372/1‑140 (MQ=255) tGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAg > 1:653164/1‑140 (MQ=255) tGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAg > 1:2640449/1‑140 (MQ=255) tGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAg > 1:1452078/1‑140 (MQ=255) tGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAg > 1:1305896/1‑140 (MQ=255) tGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAg > 1:2729044/1‑140 (MQ=255) tGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGAGAATGGCTCGGGATCGGCAGTAACAg > 1:3091264/1‑140 (MQ=255) tGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAACCGGCAAAAACAAAGAAGAGATAAGTTATATCGAAGAGAATGGATAGGGATCGGCAGTAACAg > 2:2659452/1‑140 (MQ=255) gACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGa > 1:1980302/1‑140 (MQ=255) agaaCAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGacttact < 1:2972703/140‑1 (MQ=255) ggCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGaa > 1:1081198/1‑140 (MQ=255) ggCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGaa > 2:148926/1‑140 (MQ=255) ggCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGaa < 2:1241657/140‑1 (MQ=255) cccATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAgg < 2:771201/140‑1 (MQ=255) tCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATc > 2:1151051/1‑78 (MQ=255) tCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTc > 1:2878987/1‑101 (MQ=255) tCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTc < 2:2878987/101‑1 (MQ=255) tCTTCACCGAATCCCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGAt > 1:908839/1‑140 (MQ=255) ttCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTc < 2:1305896/140‑1 (MQ=255) aCCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAg > 1:715690/1‑140 (MQ=255) aaTCTCGAGGCAAAAAAGCATGTCATGCAGACAGCGCTTGAAAAAAGCTGCAAAAAGAAAGAAAACAACAGTTATATAGAAGCCAAAGGCAAGGGATCGGCAGGAACACACTTAAATGAAAGGAAAGAGATACAAGCCaa > 2:444574/1‑139 (MQ=255) tctcGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCAttt > 1:2690785/1‑140 (MQ=255) aGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGAGAAAGGCTCGGGATCGGCAGGAACAGACATACTTGAAATGAAGGCGATAAAAGACATTTAACGc > 2:3012309/1‑140 (MQ=255) ggCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCt < 1:503793/140‑1 (MQ=255) ggCACAAAAGGACGTCATGCTGTCAGCGCTTGAAAAAAGCGGCAAAAATAATGAAGAGATAAACTATATCGAAGCGAACGGATCGGGGTCGGCAGGAACAGATTTACTTGAATTAAAGGCAATCCAGTACAGTTACCgtg > 2:2180622/1‑138 (MQ=255) gaacaAAAGGATCTCATTCAGACAGCTCTTGAAAAAAGCGGCAAAAAGCATGAAGAGATCAGTTATCTCGAAGCGAATGGATCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTc < 2:2691340/138‑1 (MQ=255) acaAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAAAGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCg > 2:1204001/1‑140 (MQ=255) acaAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCAGAAGAGATAAGTTATCTCGAAGCGAATCGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTAAAGCCATTTACCgaaacg > 2:821569/1‑135 (MQ=255) caAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATAAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCgg > 2:2684763/1‑140 (MQ=255) aTGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAg > 2:2622699/1‑140 (MQ=255) tGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAgg < 1:2665695/140‑1 (MQ=255) tGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAgg < 1:2807473/140‑1 (MQ=255) tGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAgg > 2:3036668/1‑140 (MQ=255) tGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAgg < 1:887249/140‑1 (MQ=255) tGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAgg < 1:210762/140‑1 (MQ=255) tGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAgg < 1:210789/140‑1 (MQ=255) tGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAACAGATCATTTATCTAGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAATCAATATACCGCTCCGGATCAAAgg > 2:2336870/1‑140 (MQ=255) gTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGgc < 1:3036668/140‑1 (MQ=255) gTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGgc < 1:2336870/140‑1 (MQ=255) cATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGgcgc < 2:1011770/140‑1 (MQ=255) cATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGgcgc < 2:1942445/140‑1 (MQ=255) gCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCAt < 2:908839/140‑1 (MQ=255) gCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCAt < 2:2716432/140‑1 (MQ=255) gCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCAt < 2:1986432/140‑1 (MQ=255) gCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCAt < 2:1112924/140‑1 (MQ=255) gCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCAt < 1:94709/140‑1 (MQ=255) gCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCAt < 1:978847/140‑1 (MQ=255) gCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCGCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCAt < 2:1369702/140‑1 (MQ=255) gCAGACAGCGCGTGAAAAAAGCGGCAAAACGCCTGACGAGATCAGTTATCTCGAAGCGAAGGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCAt < 2:1729079/140‑1 (MQ=255) ctgtcAGCGCTTGAAAAAAGCGGCAAAAAGACTGAAGAGATCAGCTATCTCGAAGCGAACGGATCGGGGTCGGCAGTAACAGATTTACTTGAATTAAAGGCAATCCAGTCCATTTACCGTTCTGAATCAAAGGCTCCGtt < 1:2180622/136‑1 (MQ=255) tgtcAGCGCTTGAAAAAAGCGGCAAACAGACTGAAGAGATCAGCTATCTCGAAGCGAACGGATCGGGGTCGGCAGTAACAGATTTACTGGAATTAAAGGCAATCCAGTCCATTTACCGTTCTGAATCAAAGGCTCCGTTa < 2:1276843/137‑1 (MQ=255) aGACAGCGCTTGAAAAAAGCGGCAAACAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTa < 2:1806531/140‑1 (MQ=255) aGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTa < 1:3012309/140‑1 (MQ=255) cgcTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATTGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGAGCAAAGGCGCCATTCGGGCTg > 2:1351397/1‑140 (MQ=255) cgcTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTg > 1:1800755/1‑140 (MQ=255) cgcTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTg > 2:2249870/1‑140 (MQ=255) cgcTTGAAAAAAGCGGCAAAAAACATGAAGAGATCAGTTATCTCGAAGCGAATGGCTCCGGATCGGCAGTAACAGACTTACTTGAACTGAAGTCGATGCAACCCATTTACCGCTCAGGATCAAACGCGCCATTacgccag > 2:1787937/1‑134 (MQ=255) cTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTggg < 1:740083/140‑1 (MQ=255) cTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTggg < 1:2467132/140‑1 (MQ=255) cTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTggg < 1:2836104/140‑1 (MQ=255) tGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGAt < 2:2202810/140‑1 (MQ=255) aaaTCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTg < 2:2742838/140‑1 (MQ=255) aaaGCGGCAAACAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGTACTGAAGGCGATTCAAGCCATTTCCCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTg < 2:468212/140‑1 (MQ=255) aaaGCGGCAAACAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTg < 1:683456/140‑1 (MQ=255) aaaGCGGCAAAAAGCCTGAAGAGCTCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTg < 1:2034450/140‑1 (MQ=255) aaaGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAGGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTg < 2:457543/140‑1 (MQ=255) aaaGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTg < 2:1081198/140‑1 (MQ=255) aaaGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTg < 2:722906/140‑1 (MQ=255) aaaGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTg < 2:2402643/140‑1 (MQ=255) aaaGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTg < 2:653164/140‑1 (MQ=255) aaaGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTg < 2:591075/140‑1 (MQ=255) aaaGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAAATGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTg < 2:3083835/140‑1 (MQ=255) aaGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTGa > 1:1161725/1‑140 (MQ=255) cGGCAAAAATAATGAAGAAATGAGTTATATAGAAACGAATGGATCGGGATTGGCAGTAACAGAATTAAATGAACTGAAGGCGATTCAAACCATTTACAGCTCCGGATCAAAGTCGCCAATAGGGCAGGGATCACTGAAAc > 2:2343302/1‑140 (MQ=255) cGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAAAGGCTCGGGATCGGCAGTAACCGACTTACATGAACTTAACGCGATTCAAGCCATTTACCGCACCGGATCAAAGGCGCCATTATGGCTGGGATCACTGAAAc > 2:1538669/1‑140 (MQ=255) cGGCAAAAAGCCTGAAGAGATCAGTAATCTAGAACCGAAAAGCTCGGGATCGGCAGTAACAGAAATAATAGAACTGAAGGCGATTCAAGACATTTACCGCTCCGGATCAAAGGCGCCAATAGGCCAGGGATCACTGAAAc > 2:745608/1‑140 (MQ=255) cGGCAAAAAGACTGAAGAGAACAGTTATCTCGAAGCGAAAGGCACCGGGTCGCCAGTAACAGAATTACATGAAATGAAGGCGATTCAAGCCATTTACAGCTCCGGATCAAAGGCGCCAATAGGGCTGGGAACAGTGcaaa > 2:2620151/1‑139 (MQ=255) gtcAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACATACTTACTTGAACTGAAGGAGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTGAAAcc < 2:420722/138‑1 (MQ=255) ggCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTGAAAcc < 1:697719/140‑1 (MQ=255) aaaaGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTGAAACCTAAc < 1:886380/140‑1 (MQ=255) aaaGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTGAAACCTAACa > 2:1575777/1‑140 (MQ=255) | CGAAGACGGAGATTCCATATATGCAGTTATTAAAGCCGCTGCTATTAACAATGACGGAAGAACAGCAGGCCCATCTTCACCGAATCTCGAGGCACAAAAGGATGTCATGCAGACAGCGCTTGAAAAAAGCGGCAAAAAGCCTGAAGAGATCAGTTATCTCGAAGCGAATGGCTCGGGATCGGCAGTAACAGACTTACTTGAACTGAAGGCGATTCAAGCCATTTACCGCTCCGGATCAAAGGCGCCATTAGGGCTGGGATCAGTGAAACCTAACA > NZ_CP034943/1789632‑1789906 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |