| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,898,222 | A→G | 7.9% | T291T (ACA→ACG) | parE → | DNA topoisomerase IV subunit B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,898,222 | 0 | A | G | 7.9% | 560.8 / 26.5 | 178 | T291T (ACA→ACG) | parE | DNA topoisomerase IV subunit B |
| Reads supporting (aligned to +/- strand): ref base A (70/93); new base G (9/5); total (79/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 188 total aligned reads displayed.
AGGGGGAGCATCATTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTTCGGATTCCTGAGGAGCTTCTTCAATTTGAAGGA > NZ_CP034943/1898083‑1898360 | aGGGGGAGCATCATTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGaca > 2:355936/1‑140 (MQ=255)aGGGGGAGCATCATTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGaca > 2:380924/1‑140 (MQ=255) ggggAGCATCATTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACg < 2:1969109/140‑1 (MQ=255) ggggAGCATCAGTCAATAGCAGTGGACTTTGGGTTCCAGTTTAACGACGGCTAGTCTGAAAACATTTTATGGGTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCATGTGCAAAAACAGCGATGACACg < 2:1881533/140‑1 (MQ=255) gggCATCATTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGc > 1:545647/3‑140 (MQ=255) gAGCATCATTCAATAGAAGTTGACTTTGCGTTCAAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGc > 1:3001644/1‑140 (MQ=255) gAGCATCATTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGc > 1:155413/1‑140 (MQ=255) gAGCATCATTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGc > 1:2820542/1‑140 (MQ=255) gAGCATCATTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGATATTCTGAAAACATTTTATCGTTTGTTAACAAAGTCAGAACAAAAGACGGAGCTACTCATGAGTCAGGTGCAAAAACAGCGATTACACTTGc > 1:1853636/1‑140 (MQ=255) aGCATCATTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGTACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCt < 2:2298836/140‑1 (MQ=255) aGCATCATTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCt < 2:1078062/140‑1 (MQ=255) aGCATCATTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCt < 2:2764877/140‑1 (MQ=255) gCATCATTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGATGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCtt > 2:2807102/1‑140 (MQ=255) gCATCATTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCtt > 1:648973/1‑140 (MQ=255) gCATCATTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGCTGCAAAAACAGCGATGACACGTGCtt > 2:3045220/1‑140 (MQ=255) catcatTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCttt < 2:1008318/140‑1 (MQ=255) tcatTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTa < 2:2992958/140‑1 (MQ=255) tcatTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTa < 2:202832/140‑1 (MQ=255) ttCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATg > 1:308042/1‑140 (MQ=255) ttCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATg > 1:872033/1‑140 (MQ=255) aaTAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCTATGACACGTGCTTTTAATGAat > 2:1139568/1‑140 (MQ=255) caGTGGACTGTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATgcg < 2:1696119/139‑1 (MQ=255) aaGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATgcg < 2:1568477/140‑1 (MQ=255) aaGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATgcg > 1:1113774/1‑140 (MQ=255) aaGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATgcg < 2:58922/140‑1 (MQ=255) aaGTGGACTTTGAGTTACAGTTTAACTACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATgcg < 2:1180689/140‑1 (MQ=255) aaGTGGACTGTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATgcg < 2:713560/140‑1 (MQ=255) gTGGACTTTGCGTTCAAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAACACAGCGATGACACGTGCTTTTAATGAATATGcgcg > 2:542367/1‑140 (MQ=255) gACTTTGCGTTCCAGTTTAACGATGGTTATTCTGAAAATATTTTGTCGTTTGTCAACAATGTCAGAACAAAAGACGGCGGGACGCATGAGTCAGGTGCAAAAACTGCGATGACGCGTGCTTTTAATGAATATGCGCGaaa > 2:1325836/1‑140 (MQ=255) gACTTTGCGTTCCAGTTTAACGATGGTTATTCTGAAAATATTTTGTCGTTTGTCAACAATGTCAGAACAAAAGACGGCGGGACGCATGAGTCAGGTGCAAAAACTGCGATGACGCGTGCTTTTAATGAATATGCGCGaaa > 2:2038006/1‑140 (MQ=255) gACTTTGCGTTCCAGTTTAACGATGGTTATTCTGAAAATATTTTGTCGTTTGTCAACAATGTCAGAACAAAAGACGGCGGGACGCATGAGTCAGGTGCAAAAACTGCGATGACGCGTGCTTTTAATGAATATGCGCGaaa > 2:1832469/1‑140 (MQ=255) gACTTTGCGTTCCAGTTTAACGATGGTTATTCTGAAAATATTTTGTCGTTTGTCAACAATGTCAGAACAAAAGACGGCGGGACGCATGAGTCAGGTGCAAAAACTGCGATGACGCGTGCTTTTAATGAATATGCGCGaaa > 2:2951705/1‑140 (MQ=255) gACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACCACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGaaa > 2:2167269/1‑140 (MQ=255) gACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGaaa > 2:825300/1‑140 (MQ=255) gACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGaaa > 1:416984/1‑140 (MQ=255) gACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGaaa > 1:308145/1‑140 (MQ=255) gACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGaaa > 2:869657/1‑140 (MQ=255) gACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGaaa > 2:944320/1‑140 (MQ=255) gACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGaaa > 1:2717814/1‑140 (MQ=255) cTTTGCGTTCCAGTTTAACGACGGCTATTCTTAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTAATGAGTCAGGTGCAAAAACAGCGATGACACGTGATTTTAATGAATATGCGCGAAAAg > 1:2249811/1‑140 (MQ=255) cTTTGCGTTCAATTTTAAAGACGGATATTCTTAAAAGATTTTATCGTTTTTTAACAAAGTCAGAACAAAATACGTCGGTAATCATTATTCAGGTGCAAAAACAGATATGACACGTTATTTTAATGAATATGCGCGAAAAg < 2:2569269/140‑1 (MQ=255) tGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTgg > 1:2297315/1‑140 (MQ=255) tGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTgg > 1:2763040/1‑140 (MQ=255) tGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTgg > 1:1766275/1‑140 (MQ=255) tGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTgg > 1:2886425/1‑140 (MQ=255) tGCGTTCCAGTTTAACGACGGCTATTCGGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTACTGAATATGCTCGAAAAGTgg > 1:1490577/1‑140 (MQ=255) tCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTg > 2:1247076/1‑140 (MQ=255) gTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTga < 2:61238/140‑1 (MQ=255) tATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCTATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATaa < 2:2879443/140‑1 (MQ=255) tATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATaa < 2:1113774/140‑1 (MQ=255) aaaaCATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTg > 1:2810899/1‑140 (MQ=255) aaCATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGa < 1:825300/140‑1 (MQ=255) aaCATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGa < 1:944320/140‑1 (MQ=255) aaCATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGa < 1:1947848/140‑1 (MQ=255) aaCATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGa < 1:2728315/140‑1 (MQ=255) aaCATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGa < 1:1214948/140‑1 (MQ=255) aaCATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGa < 2:3048961/140‑1 (MQ=255) aaCATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGa < 1:2466321/140‑1 (MQ=255) ccttttATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAg < 1:1006819/138‑1 (MQ=255) aTTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAgg < 2:648973/140‑1 (MQ=255) ttttATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGc < 2:116863/140‑1 (MQ=255) tttATCTTTTGTTAACAACGTCAGAACAAAAGACGGCGGTACTCATGAGTCAGGTGCAAAAACATCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCa < 1:2152807/140‑1 (MQ=255) tttATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCa < 2:797602/140‑1 (MQ=255) tttATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCa < 1:1045356/140‑1 (MQ=255) tttATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCa < 1:380924/140‑1 (MQ=255) tttATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCa < 1:668738/140‑1 (MQ=255) ttATCGTTTGTTAACAACGTCAGACCAAAAGACGGCGCGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCAc < 2:2451295/140‑1 (MQ=255) ttATCGTTTGTTAACAACGTCAGAACAATAGACGGCGGGACTCTTGAGTGAGGTGCAAAAACAGCGTTGACACGTGCTTTTTTTGAATAGGCGCGAAATGTGGCTTTGCTGAAAGAAAATGATAAACCGGTGGAAGGCAc < 2:438937/140‑1 (MQ=255) ttATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATTAAAACCTGGAAGGCAc < 1:254394/140‑1 (MQ=255) ttATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCAc < 1:25274/140‑1 (MQ=255) ttATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCAc < 2:977962/140‑1 (MQ=255) ttATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCAc < 1:1439242/140‑1 (MQ=255) ttATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCAc < 1:323800/140‑1 (MQ=255) ttATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCAc < 1:581866/140‑1 (MQ=255) tATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACt < 1:2325349/140‑1 (MQ=255) gTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGata < 2:308165/140‑1 (MQ=255) gTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGata < 2:2599963/140‑1 (MQ=255) tGTTAACAACGTCAGAACCAAAGACGGGGGGACTCATGAGTCAGGTGCAAAAACAGCGATTAGACGTGCTTTTAATGCATATGCGCGAAAGGTGGCGTTGGTGACAGAAAAGGATAAAAACCTGGAAGGCCCTGatctca > 1:1648001/1‑136 (MQ=255) gAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGATCTAAGGGAAGGGCTTTCa > 2:923770/1‑140 (MQ=255) gAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGATATAAGGGAAGGGCTTTCa < 2:2275551/140‑1 (MQ=255) aCAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAACAGGATAACAACCTGGAAGGCACTGATATAAGGGAAGGGCTTTCAGc < 1:2204527/140‑1 (MQ=255) aaGACGGCGGGCCTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGAGATAAGGGAAGGGCTTTCAGCCatt > 1:727799/1‑140 (MQ=255) aaGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTTCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGATATAAGGGAAGGGCTTTCAGACatt > 1:1559885/1‑140 (MQ=255) aaGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGATATAAGGGAAGGGCTTTCAGCCatt > 2:1957055/1‑140 (MQ=255) ggcggGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGATATAAGGGAAGGGCTTTCAGCCATTATTTc > 1:2234998/1‑140 (MQ=255) gggACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGt < 2:2601880/140‑1 (MQ=255) aCTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTTCg < 1:75191/140‑1 (MQ=255) tCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTTCGGa < 2:155730/140‑1 (MQ=255) tCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTTCGGa < 2:1573073/140‑1 (MQ=255) tCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTTCGGa < 2:319682/140‑1 (MQ=255) cATGAGTCAGGTGCAAAAACTGCGATGACGCGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAGAACCTTGAAGGCACCGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTCCGCAt < 1:1325836/140‑1 (MQ=255) cATGAGTCAGGTGCAAAAACTGCGATGACGCGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAGAACCTTGAAGGCACCGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTCCGCAt < 1:2951705/140‑1 (MQ=255) cATGAGTCAGGTGCAAAAACTGCGATGACGCGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAGAACCTTGAAGGCACCGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTCCGCAt < 1:2038006/140‑1 (MQ=255) cATGAGTCAGGTGCAAAAACTGCGATGACGCGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAGAACCTTGAAGGCACCGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTCCGCAt < 1:1877528/140‑1 (MQ=255) aTGAGTCAGGTGCAAAAACTGCGATGACGCGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAGAACCTTGAAGGCACCGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTCCGCAtt > 2:1871178/1‑140 (MQ=255) aGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTTCGGATTCCTgagg < 1:308751/140‑1 (MQ=255) aaaaCAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTTCGGATTCCTGAGGAGcttct > 2:40339/1‑140 (MQ=255) gATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTTCGGATTCCTGAGGAGCTTCTTCAATTTg < 1:2613606/140‑1 (MQ=255) ctGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTTCGGATTCCTGAGGAGCTTCTTCAATTTGa < 2:2215517/139‑1 (MQ=255) aacGTGCTTTTATTTAATATGCGCGTAAAGTTGTTTTGCTGTTAGAATAGGATAATAACCTGGATGGCTGTGATTTAAGGGAAGGGCTTTCAGCAATTATTTCTTTTCGGATTCCTGAGGAGCTTATTCAATTTGAAGGa < 2:1510633/139‑1 (MQ=255) | AGGGGGAGCATCATTCAATAGAAGTGGACTTTGCGTTCCAGTTTAACGACGGCTATTCTGAAAACATTTTATCGTTTGTTAACAACGTCAGAACAAAAGACGGCGGGACTCATGAGTCAGGTGCAAAAACAGCGATGACACGTGCTTTTAATGAATATGCGCGAAAAGTGGCTTTGCTGAAAGAAAAGGATAAAAACCTGGAAGGCACTGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTTCGGATTCCTGAGGAGCTTCTTCAATTTGAAGGA > NZ_CP034943/1898083‑1898360 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |