| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 316,262 | C→A | 14.4% | Q28K (CAA→AAA) | opuAA → | glycine/proline betaine ABC transporter ATP‑binding protein OpuAA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 316,262 | 0 | C | A | 14.4% | 433.7 / 14.1 | 213 | Q28K (CAA→AAA) | opuAA | glycine/proline betaine ABC transporter ATP‑binding protein OpuAA |
| Reads supporting (aligned to +/- strand): ref base C (102/72); new base A (2/37); total (104/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.40e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 213 total aligned reads displayed.
TGGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCA > NZ_CP034943/316126‑316399 | tgGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCaaa > 2:2359686/1‑140 (MQ=255) gAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATg > 1:342287/1‑140 (MQ=255) aTGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCt > 1:165961/1‑140 (MQ=255) cATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCaa > 1:1393337/1‑140 (MQ=255) gtgtTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGaa > 1:1182770/1‑140 (MQ=255) tgtTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGaaa < 2:1376073/140‑1 (MQ=255) tgtTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGaaa < 2:3040651/140‑1 (MQ=255) tgtTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGaaa < 2:520133/140‑1 (MQ=255) gtTACGGTTCTAAGGATTGTGTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGCAACAAACAAAGAACGCAGTGCAAATGCTTGCCAACGGAAAg > 1:1592772/1‑140 (MQ=255) gtTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGaagg > 1:869373/1‑138 (MQ=255) gtTACGGGTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAACGCTGTTCAAATGCTTGCCAACGGagag > 2:3096498/1‑140 (MQ=255) ttACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATGTAAATTTTTTGGGAAACAAACAAAGAAGGGAGTTCAAATGGTTGCCAACGGAAAGa > 2:1635291/1‑140 (MQ=255) aCGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACa > 2:454094/1‑140 (MQ=255) gTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACaaaa > 2:2318290/1‑140 (MQ=255) aaGGATTGTTTAATATGGAGGGAAAATATGAGTGTATATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAaga < 2:2164533/140‑1 (MQ=255) aaGGATTGTTTAATATGGAGGCAAAATATGAGAGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAACGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAaga < 1:2806876/140‑1 (MQ=255) aaGGATTGTTTAATATGGAGCGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAACTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAaga < 2:1138751/140‑1 (MQ=255) aaGCATTCTTTAATATGGAGGGAAAATATGAGTCTAGAAGAGAAACCAATTAAGATAAAAGTCGAGAAACTATCTAAAAATTTTGGCAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAaga < 1:2351195/140‑1 (MQ=255) ttttttAATTTGGAGGTAAAATATGATTGTAGATTAGAAACAAATTAAGATAAAAGTCGAGAACGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCATTTCAAATGCTTGCCAACGGAAAGAAAAAAAAAGAGATcc < 2:179976/137‑1 (MQ=255) ttGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACTGAACGACCAAAAAAGAGATcc > 1:1242268/1‑140 (MQ=255) tGTTTAATATGGAGGGAAAATATGAGTGTATATGAGAAACCAATTAAGATAAAAGTCGAGACAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGAAGTTCAAATGCTTGCAAACGGAAAGACAAAAAAAGAGATCCt > 1:2061071/1‑140 (MQ=255) tGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTATGATCAAAGTCGAGAACGGATCGACAATTTTTGGGAAACGAACAAAGAAAGCTGTTCAAATGCTTGCCAACGGAAAGACACACAAAGAGATCCt > 2:645651/1‑140 (MQ=255) tGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAATTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCCACGGAAAGACAAAAAAAGAGATCCt > 2:535448/1‑140 (MQ=255) tGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCACCGGACAGACAAAAAAAGAGATCCt > 1:2940523/1‑140 (MQ=255) tGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATcat > 2:2527025/1‑138 (MQ=255) tGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGAAGTTCAAATGCTTGCCAAAGGAAAGACAAAAAAAGATATCCt > 2:1314880/1‑140 (MQ=255) tGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTAGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCACACGGAAAGACAAAAAAACAGATCCt > 2:2043523/1‑140 (MQ=255) tttAATATGGACGGAAAATATGAGATTAGATCACACACCAATAAAGATAAAAGTATAGAAAATATCTAAAATTTTTGGGAAACACACAAAGATAGAAGTTCAAATGGTTGCCAACGGAAAGAGAGTGAAAGAGATCCTGa > 2:2116138/1‑140 (MQ=255) tatGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCg > 1:589069/1‑140 (MQ=255) gAGGGAAAATATGAGTGTAGATGAGGAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCg > 1:1035615/1‑140 (MQ=255) gAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACCAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAGGAGATCCTGAAAGCGACCg > 1:1991616/1‑140 (MQ=255) gAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCg > 1:1966959/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:3000644/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:30289/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:1021783/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 2:1111635/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:1100121/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:1161411/1‑140 (MQ=255) aGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCgg > 1:1311856/1‑140 (MQ=255) atatGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAATCAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGACAGCGACCGGAGCaagc > 2:2136968/1‑138 (MQ=255) tGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTAAAATGCTTGCAAACGGAACGACAAAAAAAGAGATCCTGAAATCTACCGGATCAACCGtt > 2:151019/1‑140 (MQ=255) tgtAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTCAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGCTgtcg > 1:1869866/1‑137 (MQ=255) tAGATGAGAAAGCACGTAAGATCAATGTCGAGAAAGTATCTAAAATTTGTGGGAAACAAACAAAGTATGCAGTTCAAATGCTTGCCAACGGAACGGCCAAAAAAGAGAGCCTGGAGGCGAGCGGATCAAGCGGTGGGGTa > 2:1242825/1‑140 (MQ=255) tAGATCAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGCAACAAACAAAGAAAGCAGTTAAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGGTGGGGTa > 2:1860746/1‑140 (MQ=255) gATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTaaa > 1:2598703/1‑140 (MQ=255) aTGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAAt > 2:1471024/1‑140 (MQ=255) aTGACAACCAAATTAAGAAAAACGTCGAGAAAGTATCTAAAATTTTTGGGAAAAAAACAAATAAAGCAGTTAAATTGCTGGCAAACGCAAACAAAAAAAAAGAGACCCTCAAAGCGACCGGATCAACCGTTGGGGTAAAt < 1:753148/140‑1 (MQ=255) aTGACAAACCAATTAACAACAAACTCCAGAAAGTAACTAAAATTTTTGGCAAACAAACAACGAAACCAGTACAAAGCCTTCCCAACCGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAAt < 1:3079149/140‑1 (MQ=255) aaaCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGc > 1:1894501/1‑140 (MQ=255) aaaCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGc > 1:2223071/1‑140 (MQ=255) aaaCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGc > 1:2483288/1‑140 (MQ=255) aaaCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGc > 1:2656396/1‑140 (MQ=255) aaaCCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAACCAGTTAAATTGATGGCCAACGGAAAGACAAAAAAAGAGAGCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGc < 2:707376/140‑1 (MQ=255) aaaCCAATTAAGATAAAAATCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGc > 2:746452/1‑140 (MQ=255) aaaCAAATTAACATAAAAGTCTAGAAAGTATCTAAAATTTTTGGCAAACAAACAAAGAAAGCCGTACAAATGCTTGCCAACGGAAAGACAAAAAAAGAGAGCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCACGc < 2:475940/140‑1 (MQ=255) aaTTAATATAAAAGTCGATAAAGTATCTAAAATTTTTGGCAAAAAAAAAAATAAAGCAGTTAAAATGCTTGCAAACGTAAAGACAAAAAAAGAGATCCGGAACGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGAtt < 2:2733725/140‑1 (MQ=255) aTTAAGATAAACGTCCCCAAAGTAACTAAAATTTTGGCGAAAAAAACAAAGAACGCAGTAAAAATGCTGGCCACCGCAAACAAAAAAAAACACATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGAttt < 1:1082237/140‑1 (MQ=255) aTTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGAttt < 2:2182863/140‑1 (MQ=255) aTTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGAttt > 1:425052/1‑140 (MQ=255) tatgATAAAAGTCTATAAAGTATCTAAAATTTTTGGCAAACAAAAAAACAACCCTGTTAAACGGCTGGCCAACGCAAACACAAAAAAAGAGATCCTAAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTg < 1:1751769/137‑1 (MQ=255) tAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAACCAGTTAAACTGCTTGCCACCGGAAACCCAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTg < 2:1039499/140‑1 (MQ=255) tAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGCAAACAAAAAAATAAAGCAGTTAAAATGCTTGCCAACGCAAAGAAAAAAAAAGACATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTg < 2:1191715/140‑1 (MQ=255) tAAGATAAAAGTCCACAAAGTAACTAAAATTTTTGGCAAACAAAAAAAGAAAGCAGTAAAAATGCTTCCCAACGCAAACAAAAAAAAAGACAACCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTg < 2:1393337/140‑1 (MQ=255) tAAGAGAAAAGTCGATAAATTATATAAACTTTTTGGCAAACAAACAAACACAGCAGTTCAAATGCTTGCCAACGCAAACACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTg < 2:2615032/140‑1 (MQ=255) tAAGAACAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCACCGGAAAGACAAAAAAAGAGCTCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTg < 2:1592772/140‑1 (MQ=255) ataaaaacGTCGATAAAGTCTATAAATTTTTTGCAAAACAAACAAACAAACCAGTACAACTGCTTGCCACCGGAAACAAAAAAAAACACAGCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 1:10976/136‑1 (MQ=255) ataaaaaaGTGGAGAACTTATCTAAAATTTTTGGGAAAAAAACAAAGAAAGCTGTTCAAATGCTTGCCACCGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 2:1247457/136‑1 (MQ=255) ataTAAACGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAAAAAAGAACGCAGTCCAAATGCTTCCCAACGCAAACACAAAAAAATACATCCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 2:1966959/138‑1 (MQ=255) agctAAACGTCGAGAACGTATCTAAAATTTTTGGCAAACAAACAAAGAAAGCCGTTCAAATGCTTGCCAACGGAAAGACAAAAAAGGAGAGCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 2:1991616/137‑1 (MQ=255) aGATAAATGTCGAGAAAGTATCTAAAATTTTTGGCAAACAAACAAATAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 2:616110/140‑1 (MQ=255) aGATAAAATTCTTCAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCTGTTAAAATGTTTGCCACCGGAACGAAAAAAAAAGATATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 2:1773036/140‑1 (MQ=255) aGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAACGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 2:342287/140‑1 (MQ=255) aGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAACCAGTTCAAATGCTTGCCAACGGAACCACAAAAAAAGAGAGCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 2:1568439/140‑1 (MQ=255) aTAAAAGTCGAGAAAGTAGATAAAATTTTTGGCAAAAAAACAAAGAAAGCAGTACAAATGCTTGCCAACCGAAACACAAAAAAAGAGACCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGt < 2:1525924/140‑1 (MQ=255) aaaaGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAg < 2:2947688/125‑1 (MQ=255) aaaaGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGtat > 2:1410265/1‑140 (MQ=255) aaaaGTCGAGAAAGTATCTAAAATTTTTGGCAAACAAACAAAGACAGCAGTTCAATTGCTTGCCACCGCAAAGACAAAAAAAGAGAGCCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGtat < 2:1980607/140‑1 (MQ=255) aGTGGACAAATTATCTAAAATTTTTGGGAAAAAAACAATCAAACCCGTTAAAATGCTGGCCAACGCAAAGACAAAAAAAGATAGCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATatg < 1:2900985/140‑1 (MQ=255) aGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAATAAAGCAGTTCAAATGCTTGCCAAGGTAAATACAAAAAAAGAGATCCTTAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATatg < 2:1083198/140‑1 (MQ=255) ttccacaaaGTAAATAAATTTTTGGGCAAAAAAAAAAACAAAGAATTAAAAATGCTTGCCAACGCAAACACAAAAAAAGAGATCCTCAACGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATatga < 1:362664/134‑1 (MQ=255) gaAATTATCTAAAATTTTTGGGAAACAAAAAAATAAAGCATTTAAAATGCTTGCCAACGGAAAGAAAAAAAAAGACATCCTGAACGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTg < 2:1161411/140‑1 (MQ=255) actaaccTAAAATTTTTGGCAAACAAACAAACAAAGCAGTTCAATGGCTTGCCAACGCAAACACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTgag < 1:2552243/134‑1 (MQ=255) aaGTATAAAAAATTTTTGGGAAAAAAACAAAGAAAGCATTTAAATTGCTTGCCAACGTAAAGAAAAAAAAAGACTTCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTgag < 1:1073255/140‑1 (MQ=255) tATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAACACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGAt < 2:1350894/122‑1 (MQ=255) cTAAAATTTTTGGTAAACAAACAAACAACGCATTTCAAATGCTGGCCAACGGAAACACAAAAAAAGACATCCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATAttt < 1:1364460/140‑1 (MQ=255) atAAATTTTTTGGTAAACAAAAAAATAAAGCAGTTAAATTGCTTGCAAACGCAAACAAAAAAAAATACATCCTTAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATAttt < 1:1523784/139‑1 (MQ=255) atAAATTTTTTGGCAAAAAAAAAAACAAACCAGTCAAAATGCTGCCCAACGCAAACAAAAAAAAATAGATCCTCAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATAttt < 1:2728636/139‑1 (MQ=255) aaatTTTTTGGGAAAAAAACAAAGAAAGCTGTTAAAATGCTTCCCAACGCAAACACAAAAAAACATATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGt < 1:547465/140‑1 (MQ=255) aaatTTTTTGGCAAACAACCAAAGAAAGCAGTTAAAAGCCTTGCCAACGCAAAAAAAAAAAAAGACAGCCGTAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGt < 1:3112881/140‑1 (MQ=255) tttttGGGAAAAAAACAAAGAACGCAGTTAAAATGCTTGCCAACGTAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGtcatc < 2:165961/140‑1 (MQ=255) tttGTGAAAAAAACATATAAACCAGTTAAACTGCTTGCCAACGGAAATAAAAAAAAAGATATCCGGAAAGCGACCGGATCTACCGTTGGTGTAAATCAAGCATATTTTGATGTATATGATGGTGAGCTATTTGTcatcat < 2:1729370/140‑1 (MQ=255) tttGGGAAAAAAACAAATAAAGCAGTTCAAATGGTTGCCAACGGAAAGACAAAAAAATAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTcatcat < 2:226415/140‑1 (MQ=255) tttGGCAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAACACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTcatcat < 2:2839329/140‑1 (MQ=255) tttGGCAAACAAACAAAGAAACCAGTTCAAATGCTTGCCAACGTAAACACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTcatcat < 2:2598703/140‑1 (MQ=255) tgtGGTAAAAAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGCAACCACAAAAAAAGAGAGCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTcatcat < 2:1008170/138‑1 (MQ=255) ttGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATg > 2:1025824/1‑140 (MQ=255) tGGGAAACAAAAAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATgg < 2:324181/140‑1 (MQ=255) gTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGACCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATc > 2:112451/1‑140 (MQ=255) gTTCAAATGCTTGCCAACGGAAAGAAAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATc < 2:1870330/140‑1 (MQ=255) ttCAAATGCTTGCCAACGGACAGTCAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCa > 1:2103648/1‑140 (MQ=255) | TGGAATGTTACATAAGTGTTACGGTTATAAGGATTGTTTAATATGGAGGGAAAATATGAGTGTAGATGAGAAACCAATTAAGATAAAAGTCGAGAAAGTATCTAAAATTTTTGGGAAACAAACAAAGAAAGCAGTTCAAATGCTTGCCAACGGAAAGACAAAAAAAGAGATCCTGAAAGCGACCGGATCAACCGTTGGGGTAAATCAAGCAGATTTTGATGTATATGATGGTGAGATATTTGTCATCATGGGTCTATCAGGGAGCGGTAAATCA > NZ_CP034943/316126‑316399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |