| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,717,319 | T→G | 6.0% | G399G (GGA→GGC) | sdhA ← | succinate dehydrogenase flavoprotein subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,717,319 | 0 | T | G | 6.0% | 665.2 / 17.2 | 206 | G399G (GGA→GGC) | sdhA | succinate dehydrogenase flavoprotein subunit |
| Reads supporting (aligned to +/- strand): ref base T (76/117); new base G (7/6); total (83/123) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 208 total aligned reads displayed.
TTCCGTCCATACTCATAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCATTGA > NZ_CP034943/2717183‑2717456 | ttCCGTCCATACTCATAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATtcct > 2:2638881/1‑140 (MQ=255) tcaaTACTCATAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACAGAATTAGGTCCGGCCACCATTCCTCCGTa > 1:3001593/4‑140 (MQ=255) tCCATACTCATAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCgga > 1:1990553/1‑138 (MQ=255) tCCATACTCATAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTa > 1:2340638/1‑140 (MQ=255) tCCATACTCATAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTAGGTCCGGCCACCATTCCTCCGTa > 2:866707/1‑140 (MQ=255) cATACTCATAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTaaa < 1:188390/140‑1 (MQ=255) cATAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCgg < 2:2513863/140‑1 (MQ=255) cATAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCgg < 1:2579581/140‑1 (MQ=255) cATAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCgg < 1:2860956/140‑1 (MQ=255) aTAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGga > 2:1102609/1‑140 (MQ=255) aTAATCTCAGCCCATTTTTCGTCTTCTTTTGTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGga < 2:294197/140‑1 (MQ=255) cAGCCCATTTTTCTGCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGACTTCTGCGGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAgg < 2:2727749/140‑1 (MQ=255) atcccATTTTTCTTATTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCTTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGGAAATCGCGGAGAGCAggt > 2:2302937/3‑139 (MQ=255) aGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAggg > 1:2410847/1‑140 (MQ=255) aGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAggg > 1:3069207/1‑140 (MQ=255) aGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAggg > 1:1771225/1‑140 (MQ=255) aGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAggg > 2:1806711/1‑140 (MQ=255) aGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAggg > 2:2085581/1‑140 (MQ=255) cccATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGga < 1:16353/130‑1 (MQ=255) cccATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAg > 1:372292/1‑140 (MQ=255) cATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGtt < 2:190743/140‑1 (MQ=255) cttcttTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAg > 2:1142705/1‑140 (MQ=255) cttcttTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAg > 2:2686566/1‑140 (MQ=255) ttcttTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGc > 2:1940549/1‑140 (MQ=255) ttttAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTg < 1:1348963/140‑1 (MQ=255) aaCGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGGAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgc < 2:1028308/140‑1 (MQ=255) aCGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTCAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgcc < 1:2301625/140‑1 (MQ=255) aCGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgcc < 1:2916047/140‑1 (MQ=255) aCGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgcc < 1:1025584/140‑1 (MQ=255) aCGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgcc < 1:1438316/140‑1 (MQ=255) aGCTTCGAATAAAGTTGAAGACATGTCTTCTGCTGAAGATTCTTAGCGTTTTACATATTTCCCCGCAGTCGTTCCGGCCACCCTTCCTCCGTAAATCCCGGAGAGCAGGTAGGTTGCCCCCAAGCGGTTGCCGCCGTGCa < 2:771062/140‑1 (MQ=255) aGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCa < 1:2482212/140‑1 (MQ=255) aGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCa < 1:2638881/140‑1 (MQ=255) aGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCa < 1:447821/140‑1 (MQ=255) aGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCa < 1:1721496/140‑1 (MQ=255) gCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCAt < 1:1834253/140‑1 (MQ=255) cGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATa < 1:1014609/140‑1 (MQ=255) cGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATa < 1:1678835/140‑1 (MQ=255) cGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATa < 1:980111/140‑1 (MQ=255) cGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATa < 1:2221138/140‑1 (MQ=255) aaTAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTa < 2:2891220/140‑1 (MQ=255) aTAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTaa < 1:417279/140‑1 (MQ=255) gATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATcaca < 1:1534480/140‑1 (MQ=255) gATGAAGACATGTCTGCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTTCCCCCAAGCGGTTGCCGCCGTGCATTGAGTAATcaca < 1:1867119/140‑1 (MQ=255) aTGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACAt > 1:666067/1‑140 (MQ=255) aaGACATGTCTTCCGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGACCGGCCACCATGCCTCCGTAAATCGCAGACAGCAGGGAGTTCGCTCCCAAGCGGTTGCCGCCGTGCATAGAATAATCACATTcc > 2:378121/1‑140 (MQ=255) aGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTccc < 1:2588117/140‑1 (MQ=255) aGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTccc < 1:1153761/140‑1 (MQ=255) cATGTCGTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCAGTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCgg < 2:757798/140‑1 (MQ=255) gTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTg > 2:3030125/1‑140 (MQ=255) ttctGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCaa < 1:514562/140‑1 (MQ=255) tctGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCaaa < 1:1102609/140‑1 (MQ=255) tctGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCaaa < 2:3077710/140‑1 (MQ=255) tctGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCaaa < 2:2838071/140‑1 (MQ=255) ctgctgAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATa < 2:1214513/113‑1 (MQ=255) tgctgAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgcc < 2:1074091/105‑1 (MQ=255) tgctgAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgcc > 1:1074091/1‑105 (MQ=255) aaGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgc > 2:1672917/1‑99 (MQ=255) aaGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTccc > 1:1330872/1‑140 (MQ=255) aaGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTccc > 1:1247685/1‑140 (MQ=255) aaGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTccc > 1:3013311/1‑140 (MQ=255) aaGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGGAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTccc > 1:887418/1‑140 (MQ=255) tAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGt > 2:428978/1‑140 (MQ=255) tttACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTccc < 2:703121/109‑1 (MQ=255) tttACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTccc > 1:703121/1‑109 (MQ=255) tttACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCACAGAGTCCCGGGATGTTTGTCAt > 1:1693058/1‑140 (MQ=255) tttACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCAt > 1:2659537/1‑140 (MQ=255) tttACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGAGGTTTGTCAt > 1:1550986/1‑140 (MQ=255) ttACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCAtt < 2:139336/140‑1 (MQ=255) ttACATATTTCACCGCATTCGGTCCGGCCACCAGTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCAtt < 2:2401165/140‑1 (MQ=255) tttCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGt > 2:612581/1‑140 (MQ=255) tCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTaa > 1:1926347/1‑140 (MQ=255) tCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTaa > 1:862333/1‑140 (MQ=255) cACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAAt > 1:2405223/1‑140 (MQ=255) cACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAAt > 1:2812031/1‑140 (MQ=255) cACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAAt > 1:928365/1‑140 (MQ=255) cACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAAt > 1:1505228/1‑140 (MQ=255) cACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAAt > 1:269156/1‑140 (MQ=255) cACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAAt > 1:984720/1‑140 (MQ=255) cccGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:1768868/139‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:2226595/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:547690/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:468421/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 1:564756/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:3198/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:1330872/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:1629917/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:2037710/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 1:1409778/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:2293832/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCAGTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 1:2759494/140‑1 (MQ=255) tCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCAt > 1:3027982/1‑140 (MQ=255) ccGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAAcc < 2:214415/140‑1 (MQ=255) ccGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAAcc < 2:805411/140‑1 (MQ=255) gCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGcc > 1:323982/1‑140 (MQ=255) ctacaTTCCTCCTTAAATCGCGGAGATCAGGGTTTTTGCCCCCAAGCGGTTGCCTCCGTGCATATATTAATCAGATTCCCGGGATTCAAAGATTACCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCGCa < 2:3001593/137‑1 (MQ=255) caccaTTCCTCCGTACAGCGCGGAGAGCAGGGAGTTTGCCCCCCAGCGGGTGCCGCCGTGCATAGAGTAATCCCATTCCCCGGCTGCATAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAACCCGCCCa < 2:2052659/140‑1 (MQ=255) caccaTTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCa < 2:1990553/140‑1 (MQ=255) caccaTGCCTCCGTAAATCGCAGACAGCAGGGAGTTCGCTCCCAAGCGGTTGCCGCCGTGCATAGAATAATCACATTCCCCAGCCGCAAACAGTCCAGGGATATTTGTCATTTGATCGTAATCCACCCATAAACCGCCCa < 1:1998796/140‑1 (MQ=255) aTTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCATTGa > 1:1597071/1‑140 (MQ=255) | TTCCGTCCATACTCATAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCATTGA > NZ_CP034943/2717183‑2717456 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |