| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,717,334 | G→A | 5.7% | S394S (TCC→TCT) | sdhA ← | succinate dehydrogenase flavoprotein subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,717,334 | 0 | G | A | 5.7% | 691.0 / 20.8 | 209 | S394S (TCC→TCT) | sdhA | succinate dehydrogenase flavoprotein subunit |
| Reads supporting (aligned to +/- strand): ref base G (82/115); new base A (7/5); total (89/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.43e-01 | |||||||||||
Only 100 of 222 total aligned reads displayed.
CATAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCATTGAATAATGGACTGCCGGGA > NZ_CP034943/2717196‑2717473 | cATAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCgg < 1:2594646/140‑1 (MQ=255)cATAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCgg < 1:2861092/140‑1 (MQ=255) aTAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGCATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGga < 2:783856/140‑1 (MQ=255) aTAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGga > 2:1102609/1‑140 (MQ=255) aTAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGga > 2:1301836/1‑140 (MQ=255) aTAATCTCAGCCCATTTTTCGTCTTCTTTTGTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGga < 2:294197/140‑1 (MQ=255) aGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGCGCAggg > 1:1399633/1‑140 (MQ=255) aGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAggg > 2:1806711/1‑140 (MQ=255) aGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAggg > 1:1771225/1‑140 (MQ=255) aGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAggg > 2:2410354/1‑140 (MQ=255) aGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAggg > 1:2406760/1‑140 (MQ=255) cccATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGga > 2:16353/1‑130 (MQ=255) cccATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGga < 1:16353/130‑1 (MQ=255) cccATTTTTCTTCTTCTTTCTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCCGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGACCGGCCACCATGCCTCCGTAAATCGCAGACAGCAGGGAg > 2:1998796/1‑140 (MQ=255) cccATTTTTCTTCTTCTTTCTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCCGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGACCGGCCACCATGCCTCCGTAAATCGCAGACAGCAGGGAg > 2:2297415/1‑140 (MQ=255) cATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGtt < 2:190743/140‑1 (MQ=255) cttcttTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAg > 2:1142705/1‑140 (MQ=255) ttttttAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGt < 2:301470/140‑1 (MQ=255) aaCGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGGAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgc < 2:1028308/140‑1 (MQ=255) aaCGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATACGGTCCGGCCACCATTCCTCCGGAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgc < 2:858446/140‑1 (MQ=255) aCGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTCAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgcc < 1:2301625/140‑1 (MQ=255) aCGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgcc < 1:1025584/140‑1 (MQ=255) aCGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgcc < 1:2011091/140‑1 (MQ=255) aCGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgcc < 1:1585130/140‑1 (MQ=255) aGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCa < 1:1721496/140‑1 (MQ=255) aGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCa < 1:2482212/140‑1 (MQ=255) cGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATa < 1:2221138/140‑1 (MQ=255) cGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATa < 1:1014609/140‑1 (MQ=255) cGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATa < 1:1678835/140‑1 (MQ=255) aaTAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTa < 2:2891220/140‑1 (MQ=255) aTAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTaa < 1:441959/140‑1 (MQ=255) gATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATcaca < 1:1534480/140‑1 (MQ=255) gATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATcaca < 1:3057492/140‑1 (MQ=255) aTGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACAt > 1:666067/1‑140 (MQ=255) aaGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTcc > 1:734743/1‑140 (MQ=255) aaGACATGTCTTCCGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGACCGGCCACCATGCCTCCGTAAATCGCAGACAGCAGGGAGTTCGCTCCCAAGCGGTTGCCGCCGTGCATAGAATAATCACATTcc > 2:378121/1‑140 (MQ=255) aGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCTAGCGGTTGCCGCCGTGCATAGAGTAATCACATTccc < 1:2376171/140‑1 (MQ=255) aGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTccc < 1:1153761/140‑1 (MQ=255) aGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTccc < 1:1419141/140‑1 (MQ=255) ttctGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCaa < 1:1301836/140‑1 (MQ=255) tctGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCaaa < 2:3077710/140‑1 (MQ=255) tctGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCaaa < 1:1102609/140‑1 (MQ=255) tctGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCaaa < 2:2838071/140‑1 (MQ=255) tgctgAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgcc > 1:1074091/1‑105 (MQ=255) tgctgAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgcc < 2:1074091/105‑1 (MQ=255) aaGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTccc > 1:1332909/1‑140 (MQ=255) aaGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTccc > 1:258012/1‑140 (MQ=255) aaGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTccc > 1:3013311/1‑140 (MQ=255) tttACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTgccgc < 1:377310/85‑1 (MQ=255) tttACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCACAGAGTCCCGGGATGTTTGTCAt > 1:1693058/1‑140 (MQ=255) tttACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCAt > 1:2659537/1‑140 (MQ=255) tttACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGAGGTTTGTCAt > 1:1550986/1‑140 (MQ=255) ttACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCAtt < 2:139336/140‑1 (MQ=255) tatGTCACCGCATTCGGGCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATc < 2:2276913/140‑1 (MQ=255) atTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCaaa > 2:257087/1‑112 (MQ=255) atTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCaaa < 1:257087/112‑1 (MQ=255) tttCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGt > 2:612581/1‑140 (MQ=255) tttCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGt > 2:2647626/1‑140 (MQ=255) tCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTaa > 1:2919785/1‑140 (MQ=255) tCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTaa > 1:1926347/1‑140 (MQ=255) cACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAAt > 1:1505228/1‑140 (MQ=255) cACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAAt > 1:269156/1‑140 (MQ=255) cACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAAt > 1:2812031/1‑140 (MQ=255) cccGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:1768868/139‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTTCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:1332909/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:468421/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:547690/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:2037824/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:207578/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:734743/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:2186483/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 1:623862/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCAGTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 1:2759494/140‑1 (MQ=255) aCCGCATTCGGTCCGGCCACCAGTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:1963120/140‑1 (MQ=255) gCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCAGGGATGTTTGTCATTTGATCTTAATCCAc > 1:365236/1‑140 (MQ=255) ccGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAAcc < 2:214415/140‑1 (MQ=255) acGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCCAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAAcc < 2:764280/139‑1 (MQ=255) cGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCg < 2:2697327/140‑1 (MQ=255) caccaTTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCa < 1:866707/140‑1 (MQ=255) caccaTTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCa < 1:984023/140‑1 (MQ=255) caccaTTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCa < 1:282174/140‑1 (MQ=255) caccaTTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCa < 2:3067659/140‑1 (MQ=255) caccaTTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCa < 1:891654/140‑1 (MQ=255) caccaTTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCa < 1:963505/140‑1 (MQ=255) caccaTGCCTCCGTAAATCGCAGACAGCAGGGAGTTCGCTCCCAAGCGGTTGCCGCCGTGCATAGAATAATCACATTCCCCAGCCGCAAACAGTCCAGGGATATTTGTCATTTGATCGTAATCCACCCATAAACCGCCCa < 1:1853993/140‑1 (MQ=255) caccaTGCCTCCGTAAATCGCAGACAGCAGGGAGTTCGCTCCCAAGCGGTTGCCGCCGTGCATAGAATAATCACATTCCCCAGCCGCAAACAGTCCAGGGATATTTGTCATTTGATCGTAATCCACCCATAAACCGCCCa < 1:55429/140‑1 (MQ=255) caccaTGCCTCCGTAAATCGCAGACAGCAGGGAGTTCGCTCCCAAGCGGTTGCCGCCGTGCATAGAATAATCACATTCCCCAGCCGCAAACAGTCCAGGGATATTTGTCATTTGATCGTAATCCACCCATAAACCGCCCa < 1:3070557/140‑1 (MQ=255) ctccGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCACTCGGTTGCCGCCGTGCAGAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTCTCATTTGATCGTAATCCACCCATAAACCGCCCATTGaataa > 2:390522/1‑140 (MQ=255) ctccGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc < 2:2870107/115‑1 (MQ=255) ctccGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATc > 1:2870107/1‑115 (MQ=255) ctccGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCAGAAACCGCCCATTGaataa > 2:2795330/1‑140 (MQ=255) gTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCATTGAATAATGGa < 1:1267804/140‑1 (MQ=255) tAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATACACCGCCCATTGAATAATGGAc > 2:1491870/1‑140 (MQ=255) tAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCATTGAATAATGGAc > 2:313585/1‑140 (MQ=255) tAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCATTGAATAATGGAc > 1:476592/1‑140 (MQ=255) cgcgGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCATTGAATAATGGACTGCCg > 1:19562/1‑140 (MQ=255) cgcgGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCATTGAATAATGGACTGCCg > 1:1887142/1‑140 (MQ=255) cgGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCATTGAATAATGGACTGCCggg < 2:1042928/140‑1 (MQ=255) ggAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATGCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCATTGAATAATGGACTGCCGGGa < 2:1711798/140‑1 (MQ=255) ggAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACAGTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCATTGAATAATGGACTGCCGGGa < 2:2313184/140‑1 (MQ=255) | CATAATCTCAGCCCATTTTTCTTCTTCTTTTTTAACGTGAGCGTCGAATAAAGATGAAGACATGTCTTCTGCTGAAGATTCTAAGCCGTTTACATATTTCACCGCATTCGGTCCGGCCACCATTCCTCCGTAAATCGCGGAGAGCAGGGAGTTTGCCCCCAAGCGGTTGCCGCCGTGCATAGAGTAATCACATTCCCCGGCTGCAAAGAGTCCCGGGATGTTTGTCATTTGATCGTAATCCACCCATAAACCGCCCATTGAATAATGGACTGCCGGGA > NZ_CP034943/2717196‑2717473 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |