| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,729,937 | C→A | 8.6% | E277* (GAA→TAA) | lcfA ← | long‑chain‑fatty‑acid‑‑CoA ligase LcfA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,729,937 | 0 | C | A | 8.6% | 627.5 / 4.4 | 234 | E277* (GAA→TAA) | lcfA | long‑chain‑fatty‑acid‑‑CoA ligase LcfA |
| Reads supporting (aligned to +/- strand): ref base C (40/153); new base A (30/2); total (79/155) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.62e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 235 total aligned reads displayed.
ACAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGCCAAAAT > NZ_CP034943/2729799‑2730075 | aCAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCg < 1:2988337/140‑1 (MQ=255)aCAGATCATAATGCTGCAATGCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCg < 1:2053507/140‑1 (MQ=255) cAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTTTTTTGAGAATATATTAACCGGTTACAGCGGAACAAACATAGGAACAAAAATAATTTcaa > 2:1066120/1‑138 (MQ=255) tCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGcc < 1:2334185/140‑1 (MQ=255) tAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTATGAATAAGAATCATTTGGAAGCCTAg > 2:1244837/1‑140 (MQ=255) aaTGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGt < 2:156214/140‑1 (MQ=255) tgctgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGGTGAATTTCAGCGGTTCGAGCGGATCCAACGTAGGAAGAAGAATCATTTAGAAGCCTAGttt > 2:783882/1‑140 (MQ=255) tgctgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTATGAAGAACAATCAATTAGCAGCCTAGgtt > 2:517565/1‑140 (MQ=255) tgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTTTTTGTGGATGATTTTGAGCGTTTCGAGCGGGTGAAAAATAGGAAGAAGAATCATTTCGAATCCGAGttgtat > 1:1045704/1‑136 (MQ=255) tgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTGGGAGTTTTTAAGCGGTTGGAGGGGATCAAAATTAGGGAGAAGGATCATTTGGGAGGCTAGGTTact > 1:1589808/1‑138 (MQ=255) tgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTTTTTGTGGATGATTTTGATCGGTTGGGGCGGTTCCAAAGTTGGAAGAAAAATCATTTAGTCGCCTAGTTTTAt > 1:1702755/1‑140 (MQ=255) tgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTTTCGATGTTTTTAAGCGTTTGGCGCGGATCAAACATAGGAAGAAGAATAATTTGTAAACCAAGTTTAAt > 1:1344545/1‑140 (MQ=255) tgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTGTCGAGTATTTTAAGCGGTTAGAGCGGAAAAAACTTAGGAATAAGAATCATTTATAAGCCTACTTTAAt > 2:1694945/1‑140 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTTTCGATTATTTTAAGCGTTTAGAGCGGATCAAACTTAGGAAGAAGAATAATTTAGAAACCTATTTTAAACg > 2:856645/1‑140 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCg < 1:1351535/140‑1 (MQ=255) gggTGCTGCACAAGGCCAAGCTAAAGTGGCGGGGCACCCGGAAAGAGACGCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATAATTTCGAAGCCTAGTTTAATCGAATAAtt < 1:2797717/140‑1 (MQ=255) gggTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAAtt < 1:2913555/140‑1 (MQ=255) gggTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAAtt < 1:2648863/140‑1 (MQ=255) ggTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGGTTTTGTTGTGGCTGATTTTGAGCGTTTGGAGCGGTGCCAACGTGGGACGAAGAATAATTTAGACGCCGAGTGTTATAGAAAAATtc > 1:2732244/1‑140 (MQ=255) gTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATtca < 2:1408278/140‑1 (MQ=255) gATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATtcatc < 2:1869606/140‑1 (MQ=255) gATGCAAAAGGCCAATGTAAATTGGCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATtcatc < 2:1218106/140‑1 (MQ=255) tGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTGGATGATTTTAAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATAATTTAGAAGCCGAGATTAATCGAATAATTAATAAc > 1:1729049/1‑140 (MQ=255) tGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCAc < 1:834540/140‑1 (MQ=255) tGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTGTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCAc < 1:517320/140‑1 (MQ=255) aaGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCg < 2:2289736/140‑1 (MQ=255) aaGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCg < 2:2204785/140‑1 (MQ=255) aGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGt < 2:1957929/140‑1 (MQ=255) ggCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTc < 1:1224831/140‑1 (MQ=255) ggCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGGCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGCAGAAGAATCATTTAGAAGCCTAGTTTAATGGAATAATTCATCACTGCCGTc < 1:1112738/140‑1 (MQ=255) gCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCa < 1:2446310/140‑1 (MQ=255) cAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGTTGATTTTGAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTAAACACAGGCGTCAGt > 2:2971709/1‑140 (MQ=255) cAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGt < 1:401488/140‑1 (MQ=255) cAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTTTCGATGATTTTAACCGTTTAGAGCGGATCAAACGTAGGAACAAGCATAATTTAGAAGCCTAGTTTAATCGAATAAATAATAACAGCCCTCact > 2:1622907/1‑138 (MQ=255) aTTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTTTTTGTCGATGATATTCAGCCTTTCGATCGGATAAAACTTAGGAACAATAAAAATTTATAAACCAAGTTTAATCAAAAAATTAAAAAATGCCGTCAGTCCGTATAc > 2:694531/1‑140 (MQ=255) aTTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTTTCGGAGATTTTCAGCGTTTCGCGCGGATCAAACATAGGAAAAAAAAACAATTAAAAGCCAAGGTTAAACGAATAAATCAACACTTCCGTAAGTCAGtttaa > 2:145401/1‑139 (MQ=255) gCACCCGGAAAGAGAGTCGGTTTTTTTTTTTCGATTATTTTGAGCGTTTCGAGCGGATAAAAATTATGAAGAAGAATAAATTAGAAACCGAGTTTAATCGAATAAATTATAACTGACGTCAGTCCGTATAAGTGaaaaaa > 2:2484803/1‑140 (MQ=255) gAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACg < 1:2387518/140‑1 (MQ=255) agagTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGcc < 2:2801924/140‑1 (MQ=255) agagTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGcc < 2:1273005/140‑1 (MQ=255) tCGGTTTTTGTTTTTCGATTATTTTAAGCCTTTCGAGCCGATCAAACTTAGGAAGAAGAAAAAATTAGAAGCCAAGTTTAAAACAATAAATAAAAACTGCCCTCACTCCCTATACGTGAAAAAAACGGACCATGCCCAGc > 2:21430/1‑140 (MQ=255) tCGGTTTTTGTTTTTCGATGATTTTAAGCGTTTAGAGCGGATAAAACATAGGAAGAACAAACATTTCGAAGCCGAGTTTAATAGAAAAATTAAACAAAGCCGTCAGTCCCTAAACGTGAAAAAACGGGACGATGCCCacc > 2:1264902/1‑138 (MQ=255) tCGGTTTTTGTTTGTCGATTAATTTCAGCGTTTAGAGCGGATCAAAATTAGGAACAAGAATAATTTCGAACACTAGTTTAATCGAAAAAATCATCACAGCCGGAAGTCCGTATAAGTTAAAAAACCGGACGATTCCCacc > 2:2514200/1‑138 (MQ=255) ggTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGAACAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTAAACGTGAAAAAACGGGACGATGCCCAGCAc < 2:606836/140‑1 (MQ=255) ttgtttgtCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACttttt < 1:2397982/140‑1 (MQ=255) tttgtCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAg < 1:246997/140‑1 (MQ=255) tttgtCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAg < 1:2750585/140‑1 (MQ=255) tgtCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcc < 2:136048/140‑1 (MQ=255) tgtCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcc < 2:2027068/140‑1 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCTAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 2:1812745/140‑1 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 2:1468174/140‑1 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 2:380682/140‑1 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc > 2:1962045/1‑140 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 2:2473391/140‑1 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 1:933785/140‑1 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 1:1653492/140‑1 (MQ=255) atgatTTTCAGCGTTTCGATCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCccttc < 2:2695055/140‑1 (MQ=255) atgatTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCccttc < 2:2886267/140‑1 (MQ=255) tttCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTca < 2:840233/140‑1 (MQ=255) tttCAGCGTTTCGACCGGATAAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATTATTCATCACTGCCGTCAGTCCGGATACGTGCAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTca < 1:1030223/140‑1 (MQ=255) tCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTcaca < 2:1502816/140‑1 (MQ=255) tCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTcaca < 1:3006310/140‑1 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 1:783882/140‑1 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 2:1300969/140‑1 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 1:21476/140‑1 (MQ=255) tttCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTAc > 2:239137/1‑140 (MQ=255) tttCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTAc > 2:431971/1‑140 (MQ=255) ttCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACa > 2:2298307/1‑140 (MQ=255) gAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATcc < 1:985948/140‑1 (MQ=255) gAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATcc < 1:1439071/140‑1 (MQ=255) cGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAg < 1:2863600/140‑1 (MQ=255) cGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAg < 1:529300/140‑1 (MQ=255) gATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCg < 1:2222203/140‑1 (MQ=255) aTCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCgg > 1:1780282/1‑140 (MQ=255) aTCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCgg > 1:84364/1‑140 (MQ=255) tCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGa > 2:557706/1‑140 (MQ=255) cAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAg < 2:646302/140‑1 (MQ=255) cAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAg < 1:947626/140‑1 (MQ=255) cAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAg < 2:2876868/140‑1 (MQ=255) cAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAg < 2:1625272/140‑1 (MQ=255) cAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAg < 1:1962045/140‑1 (MQ=255) cAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAg < 1:2070756/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAATAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGATca < 1:1282139/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 1:3061757/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 1:1524352/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 1:2045812/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 1:2150295/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 2:386934/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 2:3060696/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 1:473689/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 1:1015792/140‑1 (MQ=255) aGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACAttt < 2:804270/140‑1 (MQ=255) ggAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCAc < 2:1980966/92‑1 (MQ=255) ggAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCAc > 1:1980966/1‑92 (MQ=255) aagaaTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTAt > 1:760083/1‑140 (MQ=255) aTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGc < 2:889760/140‑1 (MQ=255) cATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGCCa < 1:431971/140‑1 (MQ=255) cATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGCCa < 1:2485224/140‑1 (MQ=255) tttCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCCAGCGGAGCACATTTCAGTATTGGCCaaa < 1:856556/140‑1 (MQ=255) tttCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGCCaaa < 1:670150/140‑1 (MQ=255) | ACAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCACATTTCAGTATTGGCCAAAAT > NZ_CP034943/2729799‑2730075 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |