| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,921,064 | C→T | 5.9% | G56G (GGG→GGA) | ytrB ← | ABC transporter ATP‑binding protein YtrB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,921,064 | 0 | C | T | 5.9% | 563.7 / 16.5 | 169 | G56G (GGG→GGA) | ytrB | ABC transporter ATP‑binding protein YtrB |
| Reads supporting (aligned to +/- strand): ref base C (91/68); new base T (5/5); total (96/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 169 total aligned reads displayed.
CTTAGGATATCGACTAGCTGCTTGTATGTATACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCTTTTTCAATTGTTAATGAAACATCTTTTAATACTTGATTTCCGTCAATC > NZ_CP034943/2920939‑2921202 | ttAGGATATCGACTAGCTGCTTGTATGTATACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGaaa < 2:124501/140‑1 (MQ=255) ttAGGATATCGACTAGCTGATTGTATCTATACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGaaa < 2:2768432/140‑1 (MQ=255) aGGATATCGACTAGCTGCTTGTATGTATACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAAt > 1:299716/1‑140 (MQ=255) aGGATATCGACTAGCTGCTTGTATGTATACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAAt > 1:2104051/1‑140 (MQ=255) aGGATATCGACTAGCTGCTTGTATGTATACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAAt > 1:2103950/1‑140 (MQ=255) tCGACTAGCTGCTTGTATGTATACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGAGCTTCGGATGCTTTTTGATTTCTCCGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTg < 2:3003306/140‑1 (MQ=255) tCGACTAGCTGCTTGTATGTATACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTg < 1:867847/140‑1 (MQ=255) tCGACTAGCTGCTTGTATGTATACTTGTCGTAAAAAGGATTTTGAACAGGAATGTAGATGATATTTTGTTTGCCCTTCGGATGCTTTTTGATTTATACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTg < 1:609255/140‑1 (MQ=255) cGACAAGCTGCTAGTATGTATACTTGTCGTAAAAAGTATTTTGAACAGGCATGTAGATGATATTTTGTTTGACATTCGGATGATATTTGATTTCTACGCCATCAAACAAAATAGTCCCGCTGTCGGCGAAAAAGAgttcc > 2:2521939/1‑138 (MQ=255) aCTAGCTGCTTGTATGTATACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTg > 1:2537225/1‑140 (MQ=255) gctgctTGTTTGTATACTGGTCGTAAAACGGATTTTGAACAGGCATGTCGATGATATTTTGTTTGACCTTCGGAGGCTTTTTGATTTCTACGCCATCAAACACAATCGTCCCGCTGTCGGCGAAACTGAGTTGCTGGAtt < 2:2430418/140‑1 (MQ=255) gctgctTGTATGTATACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGAtt > 2:2450207/1‑140 (MQ=255) gctgctTGTATGTATACTGGTCGTAAAAAGGATTTAGAACAGGCATGTAGATGATATTTGGTCTGCCCTGCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGAtt < 1:625464/140‑1 (MQ=255) gctgctTGTATGTAACCTTGTCGTAAAAAGGAGTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTGCGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGAtt < 1:2258304/140‑1 (MQ=255) ttGTATGTATACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCg < 1:1946981/140‑1 (MQ=255) ttGTATGTATACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCg < 1:795444/140‑1 (MQ=255) tgtatgtaTACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGa > 1:1160157/1‑140 (MQ=255) tgtatgtaTACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGa > 1:1454732/1‑140 (MQ=255) tgtatgtaTACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGa > 1:2414467/1‑140 (MQ=255) tgtatgtaTACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGa > 2:132117/1‑140 (MQ=255) tgtatgtaTACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGa > 1:539818/1‑140 (MQ=255) tgtatgtaTACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGa > 1:41932/1‑140 (MQ=255) tataCTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCAtt < 2:660155/140‑1 (MQ=255) tataCTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCAtt < 1:1297766/140‑1 (MQ=255) ataCTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTg < 2:2657905/140‑1 (MQ=255) taCTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTc > 1:1075306/1‑104 (MQ=255) taCTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTc < 2:1075306/104‑1 (MQ=255) taCTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGt > 1:1047022/1‑140 (MQ=255) taCTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGt > 2:2912789/1‑140 (MQ=255) taCTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGt > 1:992087/1‑140 (MQ=255) ttGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGt < 2:2794453/140‑1 (MQ=255) tGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGAt > 1:1200547/1‑112 (MQ=255) tGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGtt < 1:3059692/140‑1 (MQ=255) tGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGtt > 1:2632716/1‑140 (MQ=255) tGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGtt > 1:2696554/1‑140 (MQ=255) tGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGtt > 2:1375419/1‑140 (MQ=255) tGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGtt > 2:1701694/1‑140 (MQ=255) tGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGtt > 1:1241138/1‑140 (MQ=255) tGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGtt < 1:1376089/140‑1 (MQ=255) tGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCAGTGTCGtt > 1:163675/1‑140 (MQ=255) gTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATCTTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCAGTGTCgatg > 1:1022330/1‑137 (MQ=255) gTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCtttt > 1:2904814/1‑140 (MQ=255) gTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGttt > 1:781276/1‑140 (MQ=255) gTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGttt > 2:2495538/1‑140 (MQ=255) gTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGttt > 2:1399984/1‑140 (MQ=255) gTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGttt > 1:2933435/1‑140 (MQ=255) gTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCAGTGTCGttt > 1:856378/1‑140 (MQ=255) gTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATGTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTCAGCGAAGCATTGTCGtgt > 1:2990140/1‑138 (MQ=255) tCGTAAAACGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACTTTCGGGTGCTTTTTGATTTCTACGCCGTCAAATAAAATCGTTCCGCTGTCAGCGAAAATGATTTGCTGGATTAAGCGAAGCATCGTCGtttt > 2:2396850/1‑140 (MQ=255) tCGTAAAACGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACTTTCGGGTGCTTTTTGATTTCTACGCCGTCAAATAAAATCGTTCCGCTGTCAGCGAAAATGATTTGCTGGATTAAGCGAAGCATCGTCGtttt > 2:1777305/1‑140 (MQ=255) tCGTAAAACGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACTTTCGGGTGCTTTTTGATTTCTACGCCGTCAAATAAAATCGTTCCGCTGTCAGCGAAAATGATTTGCTGGATTAAGCGAAGCATCGTCGtttt > 2:777740/1‑140 (MQ=255) tAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGcc > 2:2622912/1‑140 (MQ=255) aaaaGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGc > 1:1545911/1‑137 (MQ=255) ggCATGTAGATGATATTTTGTTTGCCCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGag < 1:964257/140‑1 (MQ=255) ggCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGag < 2:1891234/140‑1 (MQ=255) ggCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGag < 1:2914105/140‑1 (MQ=255) ggCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGag < 2:2577017/140‑1 (MQ=255) ggCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGAGTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGag < 2:509228/140‑1 (MQ=255) ggCATGTAGATGATATAGTGCTGGACCTGCGTATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTGGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGag < 1:1618216/140‑1 (MQ=255) gCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGagc > 2:2669957/1‑140 (MQ=255) gCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGagc > 2:1572287/1‑140 (MQ=255) aGATGATTTTTTGTTTGACCTTCGGATGATTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCg < 2:643138/140‑1 (MQ=255) aGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCg < 2:645916/140‑1 (MQ=255) aGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCg < 2:1947379/140‑1 (MQ=255) aGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCg < 2:1161428/140‑1 (MQ=255) gatATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTCCGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAACTGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCACTTGCGGCCGAGCAGCCCGAAGa > 1:1700312/1‑140 (MQ=255) gatATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAACTGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTTCGGCCGAGCCGCCCGAAGa > 2:1528664/1‑140 (MQ=255) gatATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGa > 1:2037131/1‑140 (MQ=255) gatATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGa > 2:916274/1‑140 (MQ=255) gatATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGAGTTGCTGGATTAATCGAAGAATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCcgacga > 2:1638479/1‑140 (MQ=255) atatTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGAt > 2:952221/1‑140 (MQ=255) atatTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGAt > 1:2618560/1‑140 (MQ=255) tttgACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCtt > 1:1042458/1‑140 (MQ=255) tgACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCtttt > 2:332766/1‑140 (MQ=255) tgACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCtttt > 2:1138849/1‑140 (MQ=255) gACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCttttt < 2:2261615/140‑1 (MQ=255) ccTTCGGATGCTTTTTGATTTCTACGGCATCAAACAAAATCGTCGCGCTGTCGGCGAATATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCTTTTTCa < 2:2501669/140‑1 (MQ=255) ccTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCTTTTTCa < 2:1467568/140‑1 (MQ=255) ccTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCTTTTTCa < 2:1467567/140‑1 (MQ=255) gCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCTTTTTCAATTGTTAAt < 2:1120100/140‑1 (MQ=255) gCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCTTTTTCAATTGTTAAt < 2:834799/140‑1 (MQ=255) tttttGATTTCTACGCCATCAAACACAATCGTCCCGCTGTCGGCTAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCTTTTTCAATTGTTAATGa < 2:535496/140‑1 (MQ=255) tttttGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATGTCTCCTTTTTCAATTGTTAATGa > 2:2821178/1‑140 (MQ=255) tttGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCTTTTTCAATTGTTAATGaaa > 2:1238038/1‑140 (MQ=255) tttGATTTCTACGACATCAAACAAAATCGTCCCGCTGTCTGAGACAATGATTTGCTGTATTAAGCGAAGCATTGTCGTTTTGCATGACCCATTGCGGCCAAGCAGCACGAATATATCTCCTTTTTCAAGTAATAATGaaa > 2:665768/1‑140 (MQ=255) ttGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCTTTTTCAATTGTTAATGAAAc > 2:657830/1‑140 (MQ=255) cTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCAtt > 1:861535/1‑65 (MQ=255) cTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCAtt < 2:861535/65‑1 (MQ=255) cTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGAGTTCTCCTTTTTCAATTGTTAATGAAACATCtttt > 2:1346170/1‑140 (MQ=255) cgtCAAATAAAATCGTTCCGCTGTCAGCGAAAATGATTTGCTGGATTAAGCGAAGCATCGTCGTTTTGCCCGATCCATTGCGTCCAAGCAATCCAAAGATTTCTCCTTTTTCGATTGTTAATGAAACATCTTTTAATACt < 1:607016/138‑1 (MQ=255) cgtCAAATAAAATCGTTCCGCTGTCAGCGAAAATGATTTGCTGGATTAAGCGAAGCATCGTCGTTTTGCCCGATCCATTGCGTCCAAGCAATCCAAAGATTTCTCCTTTTTCGATTGTTAATGAAACATCTTTTAATACt < 1:777740/138‑1 (MQ=255) cgtCAAATAAAATCGTTCCGCTGTCAGCGAAAATGATTTGCTGGATTAAGCGAAGCATCGTCGTTTTGCCCGATCCATTGCGTCCAAGCAATCCAAAGATTTCTCCTTTTTCGATTGTTAATGAAACATCTTTTAATACt < 1:1777305/138‑1 (MQ=255) cgtCAAATAAAATCGTTCCGCTGTCAGCGAAAATGATTTGCTGGATTAAGCGAAGCATCGTCGTTTTGCCCGATCCATTGCGTCCAAGCAATCCAAAGATTTCTCCTTTTTCGATTGTTAATGAAACATCTTTTAATACt < 1:2610478/138‑1 (MQ=255) cgtCAAATAAAATCGTTCCGCTGTCAGCGAAAATGATTTGCTGGATTAAGCGAAGCATCGTCGTTTTGCCCGATCCATTGCGTCCAAGCAATCCAAAGATTTCTCCTTTTTCGATTGTTAATGAAACATCTTTTAATACt < 1:2396850/138‑1 (MQ=255) aaTCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTTCCTGACCCATTGCGGCCGAGCAGACCGAAGATTTCTCCTTTTTCAATTGTTAATGAAAAATCTTTTATTAATTGATTTCAGt > 1:876303/1‑140 (MQ=255) aaTCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCTTTTTCAATTGTTAATGAAACATCTTTTAATACTTGATTTCCGt > 1:1009925/1‑140 (MQ=255) aaTCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCTTTTTCAATTGTTAATGAAACATCTTTTAATACTTGATTTCCGt > 2:1209043/1‑140 (MQ=255) aaTCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCTTTTTCAATTGTTAATGAAACATCTTTTAATACTTGATTTCCGt > 2:2558716/1‑140 (MQ=255) aaTCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCTTTTTCAATTGTTAATGAAACATCTTTTAATACTTGATTTCCGt > 1:1896516/1‑140 (MQ=255) tCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCTTTTTCAATTGTTAATGAAACATCTTTTAATACTTGATTTCCGTCAATc > 1:475861/1‑140 (MQ=255) | CTTAGGATATCGACTAGCTGCTTGTATGTATACTTGTCGTAAAAAGGATTTTGAACAGGCATGTAGATGATATTTTGTTTGACCTTCGGATGCTTTTTGATTTCTACGCCATCAAACAAAATCGTCCCGCTGTCGGCGAAAATGATTTGCTGGATTAAGCGAAGCATTGTCGTTTTGCCTGACCCATTGCGGCCGAGCAGCCCGAAGATTTCTCCTTTTTCAATTGTTAATGAAACATCTTTTAATACTTGATTTCCGTCAATC > NZ_CP034943/2920939‑2921202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |