Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NZ_CP034943 3,177,161 T→G 5.1% I326I (ATA→ATC EO946_RS16445 ← acetyl‑CoA C‑acetyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349433,177,1610TG 5.1% 605.6 / 12.9 191I326I (ATA→ATCEO946_RS16445acetyl‑CoA C‑acetyltransferase
Reads supporting (aligned to +/- strand):  ref base T (92/88);  new base G (5/6);  total (97/94)
Fisher's exact test for biased strand distribution p-value = 7.65e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 201 total aligned reads displayed.

CTCCAAATTGCTCGTTTCTCCGTTTCATTTCATGAATCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCACCGGTCCGATGCCCATCACTTCCGGCGGCACACC  >  NZ_CP034943/3177022‑3177298
                                                                                                                                           |                                                                                                                                         
cTCCAAATTGCTCGTTTCTCCGTTTCATTTCATGAATCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCtt                                                                                                                                           >  1:1284543/1‑140 (MQ=255)
cTCCAAATTGCTCGTTTCTCCGTTTCATTTCATGAATCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCtt                                                                                                                                           >  1:3090446/1‑140 (MQ=255)
cTCCAAATTGCTCGTTTCTCCGTTTCATTTCATGAATCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCtt                                                                                                                                           <  1:2207168/140‑1 (MQ=255)
cTCCAAATTGCTCGTTTCTCCGTTTCATTTCATGAATCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCtt                                                                                                                                           >  1:174961/1‑140 (MQ=255)
  ccAAATTGCTCGTTTCTCCGTTTCATTTCATGAATCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTAt                                                                                                                                         <  1:3026265/140‑1 (MQ=255)
          cTCGTTTCTCCGTTTCATTTCATGGATGAGTGAGAGTGTAAGCTTTGTGCCCGTACAGCCAAGCGGGTGTCCAAGCGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAATTCCCTGATTACTTGaa                                                                                                                                 >  2:1146335/1‑140 (MQ=255)
          cTCGTTTCTCCGTTTCATTTCATGAATCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCTTCAATTCCCAGTTCCCTTATCACTTGaa                                                                                                                                 >  2:1517817/1‑140 (MQ=255)
          cTCGTTTCTCCGTTTCATTTCATGAATCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGaa                                                                                                                                 >  2:11933/1‑140 (MQ=255)
          cTCGTTTCTCCGTTTCATTTCATGAATCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTGGaa                                                                                                                                 >  2:1699646/1‑140 (MQ=255)
          cTCGTTTCTCCGTTTCATTTCATGAATCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCAAGTTCCCTTATCACTTGaa                                                                                                                                 >  1:4302/1‑140 (MQ=255)
                    cGTTTCATTTCATGAATCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGa                                                                                                                       >  1:2555843/1‑140 (MQ=255)
                         catttcatGAATCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCaa                                                                                                                  <  2:204660/140‑1 (MQ=255)
                         catttcatGAATCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCaa                                                                                                                  <  2:1052948/140‑1 (MQ=255)
                              catGAATCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCt                                                                                                             <  2:2282792/140‑1 (MQ=255)
                                   aTCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCCAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCgtt                                                                                                        <  1:1939420/140‑1 (MQ=255)
                                   aTCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCgtt                                                                                                        <  1:1392151/140‑1 (MQ=255)
                                        tGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCgttcagtt                                                                                                   >  2:244668/1‑140 (MQ=255)
                                        tGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCgttcagtt                                                                                                   >  2:280337/1‑140 (MQ=255)
                                            agTGTAAGCTTTGTACCCGTCCAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCaaa                                                                                               >  2:2580899/1‑140 (MQ=255)
                                            agTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTACATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCaaa                                                                                               <  2:1554064/140‑1 (MQ=255)
                                              tgtAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACa                                                                                             >  2:1635766/1‑140 (MQ=255)
                                              tgtAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACa                                                                                             >  2:2009475/1‑140 (MQ=255)
                                              tgtAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACa                                                                                             >  2:2467022/1‑140 (MQ=255)
                                              tgtAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACa                                                                                             >  2:96756/1‑140 (MQ=255)
                                              tgtAACCTTTGTACCCCTACAACCCAGCGGCTGTCCAAGTGCGATTGCGCCCCCGTTGACAGTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACa                                                                                             <  1:2580356/140‑1 (MQ=255)
                                                tAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAg                                                                                           >  2:2868027/1‑140 (MQ=255)
                                                tAAGCTTTGTACCCGTACAACCAAGCGGATGTACAAGTGCGATTGCGCCCACGTTGACATTCACTTTTTCTTCATGAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGATTCGTTCAGTTCAAACAAg                                                                                           >  2:2754363/1‑140 (MQ=255)
                                                   gCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCAGTTTTTCTTCCTCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCg                                                                                        <  2:1265324/140‑1 (MQ=255)
                                                   gCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCg                                                                                        <  1:2646620/140‑1 (MQ=255)
                                                   gCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCg                                                                                        <  2:804186/140‑1 (MQ=255)
                                                   gCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCg                                                                                        <  1:280337/140‑1 (MQ=255)
                                                      ttGTACCCGTACAACCAAGCGGCTGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCGTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACCAGCCGATg                                                                                     <  1:1503780/140‑1 (MQ=255)
                                                      ttGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATg                                                                                     <  1:2354865/140‑1 (MQ=255)
                                                       tGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGt                                                                                    >  1:2135780/1‑140 (MQ=255)
                                                       tGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGt                                                                                    >  2:1343689/1‑140 (MQ=255)
                                                       tGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGt                                                                                    >  1:1871825/1‑140 (MQ=255)
                                                       tGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGt                                                                                    >  1:2380655/1‑140 (MQ=255)
                                                        gTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTc                                                                                   >  2:1873351/1‑140 (MQ=255)
                                                          aCCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCt                                                                                 >  2:1456425/1‑140 (MQ=255)
                                                              gTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGAGATTCACGTTTGCTTCATCAATTCCCAGTTCCCTTATCACTGGCATGGCGTGTGATGCTCAAGCTTCGTGGAGTTCAATCAGGCGGCTGTCCGGCAg                                                                             >  2:1099427/1‑140 (MQ=255)
                                                              gTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTAt                                                                                                                                         >  2:620260/1‑80 (MQ=255)
                                                              gTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTAt                                                                                                                                         <  1:620260/80‑1 (MQ=255)
                                                              gTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGc                                                                                                                             <  2:2915763/92‑1 (MQ=255)
                                                              gTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGc                                                                                                                             >  1:2915763/1‑92 (MQ=255)
                                                              gTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCATTTCAAACAAGCCGATGTCCTGCAg                                                                             >  2:2562872/1‑140 (MQ=255)
                                                              gTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAg                                                                             >  2:350735/1‑140 (MQ=255)
                                                              gTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAg                                                                             >  2:1947244/1‑140 (MQ=255)
                                                              gTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCACTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATTTCCTGCAg                                                                             >  2:1778199/1‑140 (MQ=255)
                                                               tACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGt                                                                            >  1:2673052/1‑140 (MQ=255)
                                                               tACAACCAAGCGGATGTCCAAGGGCGATTGCGCCCCCGTTTACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCAATAGAATGGCCTGTGATGCAAAAGCTTCGAGCAGTACAAACAATCCGATGTCATGCAGt                                                                            >  2:1380521/1‑140 (MQ=255)
                                                                 cAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTg                                                                          >  2:132934/1‑140 (MQ=255)
                                                                 cAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTg                                                                          <  1:1336158/140‑1 (MQ=255)
                                                                 cAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCAGCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTg                                                                          <  1:11933/140‑1 (MQ=255)
                                                                      aaGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGcc                                                                     >  1:491979/1‑140 (MQ=255)
                                                                      aaGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGcc                                                                     >  1:31373/1‑140 (MQ=255)
                                                                       aGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATTCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGccc                                                                    >  2:1822152/1‑140 (MQ=255)
                                                                       aGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAATCAAGCCGATGTCCTGCAGTTGAAGccc                                                                    >  2:1237151/1‑140 (MQ=255)
                                                                       aGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGccc                                                                    >  2:1941263/1‑140 (MQ=255)
                                                                         cGGATGTCCAAGTGCGAATGCGCACACGTTGACATTCACTTTTTCTTCATCAATTACCAGTTCCCTTATAAATTGAATGGCCTTTGATGCAAAAGCTTCGTTCAGTTAAAACAAGCCTAAGTCCTGCAGTTTAATCGCgg                                                                  >  2:2313982/1‑140 (MQ=255)
                                                                          ggATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGc                                                                 <  1:2257141/140‑1 (MQ=255)
                                                                          ggATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGc                                                                 <  2:72149/140‑1 (MQ=255)
                                                                          ggATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGc                                                                 <  2:1743710/140‑1 (MQ=255)
                                                                          ggATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGc                                                                 <  1:244668/140‑1 (MQ=255)
                                                                          ggAGGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGc                                                                 <  1:931729/140‑1 (MQ=255)
                                                                           gATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCa                                                                <  2:815844/140‑1 (MQ=255)
                                                                            aTGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCATGCAGTTGAAGCCCGGCaa                                                               >  2:2146645/1‑140 (MQ=255)
                                                                              gTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTg                                                                                <  2:1675727/121‑1 (MQ=255)
                                                                              gTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTg                                                                                >  1:1675727/1‑121 (MQ=255)
                                                                              gTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGGTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGc                                                             >  2:1731363/1‑140 (MQ=255)
                                                                                   aGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCaa                                                        >  2:2984200/1‑140 (MQ=255)
                                                                                   aGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCaa                                                        >  2:2336578/1‑140 (MQ=255)
                                                                                    gTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCTTTGTACTTAATTTGAAGCCCGGCAAGCTTCTAg                                                       <  2:4302/140‑1 (MQ=255)
                                                                                         aTTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACACGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCAcg                                                  >  1:400672/1‑140 (MQ=255)
                                                                                         aTTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCAcg                                                  >  1:2468743/1‑140 (MQ=255)
                                                                                         aTTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACGTGACTGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCAcg                                                  <  1:3050462/140‑1 (MQ=255)
                                                                                             cgcCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGGTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGa                                              <  1:2771246/140‑1 (MQ=255)
                                                                                               cccccGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAAt                                            >  2:875411/1‑140 (MQ=255)
                                                                                                  ccGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAATCCCGGCAAGCTTCAAGGCACGAGGAATGGc                                         >  1:2374640/1‑140 (MQ=255)
                                                                                                  ccGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGc                                         >  1:2991568/1‑140 (MQ=255)
                                                                                                  ccGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTGCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGc                                         >  1:167336/1‑140 (MQ=255)
                                                                                                  ccGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGAGGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGGCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGc                                         <  1:1712832/140‑1 (MQ=255)
                                                                                                   cGTTGACATTCACTTTTTCGTCATCAATTCCCAGTTCCCTTCTCACTTGAAGGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCt                                        <  2:3074301/140‑1 (MQ=255)
                                                                                                        aCATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCAc                                   <  2:491979/140‑1 (MQ=255)
                                                                                                        aCATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCAc                                   <  2:31373/140‑1 (MQ=255)
                                                                                                            tCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCACCGGt                               >  1:2268804/1‑140 (MQ=255)
                                                                                                               cTTTTTCTTCCTCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCACCGGTCCg                            <  1:1604319/140‑1 (MQ=255)
                                                                                                               cTTTTTCTTCATCACTTCCCAGGTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCACCGGTCCg                            <  1:661436/140‑1 (MQ=255)
                                                                                                               cTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCACCGGTCCg                            <  1:1456425/140‑1 (MQ=255)
                                                                                                               cTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCACCGGTCCg                            <  1:528209/140‑1 (MQ=255)
                                                                                                               atttttCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCACCGGTCCg                            <  1:1581449/139‑1 (MQ=255)
                                                                                                                   ttcttcATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCACCGGTCCGATGc                        >  2:2715604/1‑140 (MQ=255)
                                                                                                                     cttcATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCACCGGTCCGATGccc                      <  1:2746204/140‑1 (MQ=255)
                                                                                                                       tcatcaATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCACCGGTCCGATGCCCAt                    <  2:117433/140‑1 (MQ=255)
                                                                                                                       tcatcaATTCCCAATTCCCTGATTACTTGAATGGCCTGTGAGGCAAAAGCTTCATTCAGTTCAAACAAGCCGATGTCCTGCAGCTGAAGTCCGGCAAGCTTCAAAGCGCGCGGAATCGCTTCCACCGGTCCGATTCCCAt                    <  1:2603999/140‑1 (MQ=255)
                                                                                                                       tcatcaATTCCCAATTCCCTGATTACTTGAATGGCCTGTGAGGCAAAAGCTTCATTCAGTTCAAACAAGCCGATGTCCTGCAGCTGAAGTCCGGCAAGCTTCAAAGCGCGCGGAATCGCTTCCACCGGTCCGATTCCCAt                    <  1:1146335/140‑1 (MQ=255)
                                                                                                                           caATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCACCGGTCCGATGCCCATCACt                <  1:960152/140‑1 (MQ=255)
                                                                                                                           caATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCACCGGTCCGATGCCCATCACt                <  1:2077829/140‑1 (MQ=255)
                                                                                                                              ttCCCAGTTCCCTTATCACTTGAATGGCCTGTGATTCAAAAGCTTCGGTCAGGTCAAACAAGCCGATGTCGTGCAGTTGAAGCCCTGCAAGCTTCAAGGAACGCGGAATGGCTTCCACCGGTCCGATGCCCATCACTTcc             >  2:375678/1‑140 (MQ=255)
                                                                                                                                       cccTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCACCGGTCCGATGCCCATCACTTCCGGCGGcaca    <  1:2828859/140‑1 (MQ=255)
                                                                                                                                         cTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCACCGGTCCGATGCCCATCACTTCCGGCGGCACAcc  <  2:3090446/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                         
CTCCAAATTGCTCGTTTCTCCGTTTCATTTCATGAATCAGTGAGAGTGTAAGCTTTGTACCCGTACAACCAAGCGGATGTCCAAGTGCGATTGCGCCCCCGTTGACATTCACTTTTTCTTCATCAATTCCCAGTTCCCTTATCACTTGAATGGCCTGTGATGCAAAAGCTTCGTTCAGTTCAAACAAGCCGATGTCCTGCAGTTGAAGCCCGGCAAGCTTCAAGGCACGCGGAATGGCTTCCACCGGTCCGATGCCCATCACTTCCGGCGGCACACC  >  NZ_CP034943/3177022‑3177298

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: