| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 549,137 | T→A | 16.2% | I50N (ATC→AAC) | EO946_RS02865 → | PLP‑dependent aminotransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 549,137 | 0 | T | A | 16.2% | 395.7 / 11.0 | 179 | I50N (ATC→AAC) | EO946_RS02865 | PLP‑dependent aminotransferase family protein |
| Reads supporting (aligned to +/- strand): ref base T (79/61); new base A (3/20); total (82/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.16e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 179 total aligned reads displayed.
CGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAG > NZ_CP034943/548999‑549275 | cGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATTAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc > 2:434543/1‑140 (MQ=255)cGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc > 1:2683221/1‑140 (MQ=255)cGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc < 1:2261254/140‑1 (MQ=255) gCCTTTTTTGAATATAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGAATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCATGGCGAGTCAGCTTTCCATCa > 2:397865/1‑140 (MQ=255) gCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCa > 2:1239892/1‑140 (MQ=255) ttttAATAAAAATCTGTATATTCCGATTTATCAGCAGCTTTATCGCTTTTACAAACAAAACATCAATCAGGGGCTTATTCAAAAAGTAATTAAGCGCCCTTCAAAAACACTCGTGGCGAGTCAGCTTTCCATCAGTaaaa < 2:2535823/140‑1 (MQ=255) tttGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACAGGCATCCGGGGCGTATTCAAAAAGGATTGAAGCGCCCTTCAAAAACACTCCGGGCGAGTCAGCTTTCCACCAGTCaca < 2:551814/140‑3 (MQ=255) tttCAATAGAAATCTGTATATTCCGCTTTATAAGCATATTTTTCGCTATTTAAAACAAAACATCAATCAGGGGGGTATTCAAATAGGAATTAAGCGCCCTTCCAAAAGACTCCTGGCGTGTCAGCTCTCAATCAGTCaaa < 2:2065583/140‑1 (MQ=255) tAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTg > 1:1566300/1‑140 (MQ=255) aaaTCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGTGTCAGCTTTCCATCAGTCAAACGACTGTAg > 2:2328138/1‑140 (MQ=255) aTCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGaa > 2:2240354/1‑140 (MQ=255) ttgtatatTCCGCTTTATCAGCATGTTTATCGCTATTTCAAATAAAACATGCATCAGGGGCGTATTCAAAAAGTAATGAAGCTCCCTGCCAAACGCCTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACg < 2:81355/136‑1 (MQ=255) gtgcatatTCCTCTTTATCAGCAGATTTAGCGATATTTCAAATAAAACATGCATCCGGGGCTTATTAAAAAAGTAATGAAGCTCCCTTCAAAAACACGCGTGGCGAGTCAGCTTCCCAACAGTCAAACGACTGTAGAACg < 2:524621/136‑1 (MQ=255) cTGTATATTCCGCTTTATCAGAAGCTTTATGGCTATTTCAAAGAAAACTTGCATCTGGGGCTTATTAAAAATGTAATTAAGCTCCCTTCAAAAAGACTCGTGGCGAGTAAGCTTTCCATCAGTCAAACGACTGTAGAACg < 2:326026/140‑1 (MQ=255) cTGTATATTCCGCTTTATAAGCAGCTTTATCGCTTTTTAAAACAAAACATGCATCCGGGGGTTATTAAAAACGGAATTAAGCTCCCTTCAAAAAGCCTCCTGGCGAGTCAGCTTTCAATCAGTCAAACGACTGTAGAACg < 2:972979/140‑1 (MQ=255) cTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAACAAAACTTGCATCCGGGGCGTATTCAAAAAGTATTGAAGCTCCCTGCCAAAAGACTCCTGGGGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACg < 2:705455/140‑1 (MQ=255) cTGGATATACCTCTTTATCAGCCGCTTTCTCGCTATTTCAAATAAAACATCAATCCGGGGCTTATAAAAAAAGGAATGAAGCTCCCTACAAAAACACTCCTGCCGACTCAGCTTTCCATCAGACACACGACTGTAGAACg < 1:3060050/140‑1 (MQ=255) tGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGt > 1:2607965/1‑140 (MQ=255) gATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCCTCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGc > 1:3000783/1‑140 (MQ=255) gATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGc > 1:568788/1‑140 (MQ=255) gATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGc > 1:569324/1‑140 (MQ=255) gATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGc > 1:495437/1‑140 (MQ=255) ttCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTAt > 2:2968068/1‑140 (MQ=255) ttCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTAt > 2:2432363/1‑140 (MQ=255) tactcTTTATCAGCAGCTTTATATATAATACAAAGAAAACATGAATAAGAGGCGTATTAAAAAATGAATTAAGCTACATTCCAAAATACTCCTGGCGATTCAGATTTACAACAGTCAAACGACTGTAGAACGTGACTAtt > 2:2708331/5‑139 (MQ=255) tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAATAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCACTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATg > 1:1419026/1‑140 (MQ=255) tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATg > 1:1911690/1‑140 (MQ=255) cGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATAAGTCAAACGACTGTAGAACTTGCCTATTaa > 1:1011327/1‑140 (MQ=255) ttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGc > 1:2376907/1‑140 (MQ=255) ttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAACGAATGAAGCTCCATTCCAAAAGACTCCTGTCGAGTCAGCTTTCCAACAGTCAAACGACTGTAGAACGTGCCTATGAAAAga > 1:2383165/1‑139 (MQ=255) tCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTAGTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTtg > 2:2677578/1‑140 (MQ=255) tCACCAGCTTTAGCGCTATTACACACAAAACATGAATCCGGGGCTTATTCAAAACGGAATTAAGCCCCCTTCCAAAACACTCCGGGCGAGTCAGCTTTCCATCCGACACACGACTGTAGAACGTGCCTATGAACAGCTtg < 1:2567208/140‑1 (MQ=255) cccgcagcTTTATCGATATTTCAACTAAAACCTGCATCCGGGGCGTATAAAAAAAGGAATGAAGCTCCCGTCAAACCCACTCCGGGCGAGGCAGCTTTCCATCACTAACACGACTGTAGAACGTGCCTATGAACAGCTtg < 2:1216906/137‑1 (MQ=255) acagcagCTTTATCGCTATTTAAAAGAAAACATGCATCCGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCACCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTtg < 2:1157254/139‑1 (MQ=255) acagcagCTTTATCGCTATTAAAAACAAAACATCCATCCGGGGCGTATTAAAAAAGCAATGAAGCTCCCTTCCAAAACACTCCTGGCGAGTCAGCTTACCAACAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTtg < 2:562722/139‑1 (MQ=255) ccagtTTTATCGCTATTCAAAACAAAACACCCAACCGGGGCGTATTCAAAAAGGAATGACGCTCCCTACAAAACCACCCCTGGCGAGTAAGCTTTCCAACACTAAAACGACTGTAGAACGTGCCTATGAACAGCTtgctg < 1:551157/139‑1 (MQ=255) cgcTTTATCGCTATTACAAACAAAACCTGCATCCGGGGCGTATTCAAAAAGCAATCACGCGCCCTACCAAACCACGCCGGGCCAGTCAGCTTCCCAACAGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:2827284/139‑1 (MQ=255) cgcTTAATCGCTATTACAAACAAAACATGCAACCGGGGCGAATTAAAAACCTAATGAAGCGCCCTACCACACCCCACCTGGCGAGTCCGCTTACCAACACTAAAACGACTGTAGAACCTGCCTATGAACAGCTTgctgct < 1:180830/139‑1 (MQ=255) agttttATCGATATTTCAAACAAAACATCCATCCGGGGCTTATCAAAAAAGTAATGAAGCTCCCTTCCAAAACACTCCGGGCTATTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1930338/137‑1 (MQ=255) aggtttACCGCTATTTCAAACAAAACATCAATCCGGGGCGTATTCAAAAAGGACTCAAGCACCGTTCCAAACGACGCCTGGCGTTTCAGTGTCCCCTCAGCCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:530323/137‑1 (MQ=255) agcTTTATCTATATTAAAAACAAAACCTGCATCCGGGGCTTATTCAAAAAGGAATGAACCCCCCTTCCAAACCACCCCGGGCGACCCAGCTTACCACCACACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1327955/140‑1 (MQ=255) agcTTTATCGTTATTTAAAAGAAACCTTCAATCCGGGGCGTAGTCAAAAAGTAAGGATGCGCCATACCAAAAGACTCCGGGCGAGTCAGTTTTCCATCAGTCAAACGACTGTAGAACGTGCCTCTGAACAGCTTgctgct < 2:1998616/140‑1 (MQ=255) agcTTTATCGCTATTACAAACAAAACATGACTCAGGGGCTTTTTAAAAAAGGAATGAAGCGCCCTTCCAAAACACGCCGGGCGAGTCAGCTTGCCACCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:990889/140‑1 (MQ=255) agcTTTATCGATATTTAAAATAAACCATGCATCTGGGGCTTATAAAAAAAGGAATGAAGCTCCCTTCAAAAACACCCCTGGCGAGTCAGCTTACCATCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:92532/140‑1 (MQ=255) agcTTTATCGATATTTAAAACAAAACATGAATCTGGGGCTTATTCAAAAAGCAATGAAGCGCCCTCCAAAAAGACACCTGGCCAGTCAGCTTACCAACACTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:2808485/140‑1 (MQ=255) agcTTTATCGATATTACAAACAAAACATCCATCCGGGGCGTATACAAAAAGCACTCACGCCCCCTACCAAAAGACTCCTGGCGAGTCAGGTTGCCCTCCGACAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:6275/140‑1 (MQ=255) agcTTTAGCGATATTACAAACAAAACCTGCATCCGGGGCGTATCCAAAAAGGATTGAAGCTCCCTTCCAAAAGACCCCGGGCGAGAAAGCTTACCATCACACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:180397/140‑1 (MQ=255) agcTTTAGCGATATTACAAACAAAACATGCAACCGGGGCGTATTCAAAACGCAATGACGCGCCCTGCCAAACGCCCCGGGGCGAGTCAGGTTTCAACCCGCCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1819404/140‑1 (MQ=255) agcTTTACCGCTTTTTCAAACAAACCATGCATCAGGGCCGTATAAAAAAAGCAATGAAGCGCCCTACCAAAACCCGCGGGGCGAGTCTGCTTTCCATCCGCCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1082564/140‑1 (MQ=255) agcTTTACCGATATTTCAAACAAAACATGAATCCGGGGCGTAAACAAAAAGGATTGACGCTCCCTACCAAAACACTCCGGGCGAGTCAGCTTTCCATCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:744571/140‑1 (MQ=255) agcTTACTCGCTATTACAAAGAAAACATGCATCAGGGGCGTATTAAAAACGGAATGAAGCTCCCTTCCAAAACACCCGGGGCGAGTCAGCTTGCCAGCACTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:2382819/140‑1 (MQ=255) tttATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAAAAGCTTGCTGCTGAg > 2:2891731/1‑140 (MQ=255) tCGCTATTCAAAACAAAACAGGCATCCGGGGCGTATAAAAAAAGGATTGACGCTCCCTACCAAACCACGCCGGGCGAGTCAGCTTCCCAACCGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 1:402211/140‑1 (MQ=255) tCGATATTTCAAACAAAACATCCAACCGGGGGTTATTAAAAAAGGAATTAAGCTCCCTTCCAAACGCCCCCGGGCGAGTCAGCTTTCCACCAGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 2:866462/140‑1 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 1:1380501/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 2:141041/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 2:295878/1‑140 (MQ=255) aTTTCAAAGAAAACATGCAACAGGGGCTTATTAAAAAAGGAATTAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCAATCCGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc < 2:1071237/140‑1 (MQ=255) aTTTCAAACAAAAAATGCATCAGGGGCGTATTCAAAAAGTAATGAAGCTCCCTTCCAAAACACACCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc < 2:627659/140‑1 (MQ=255) aTTTAAAAGAAAACATGCATCTGGGGCTTATTCAAAAAGGAATGAAGATCCCTTCAAAAAGACTCCTGGCGAGTCAGCTTTCCATCCGCCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc < 2:1699660/140‑1 (MQ=255) aacaaaaCATGCATCAGGGGCTTATTAAAAAAGTATTGAAGCTCCCTTCCAAAACCCTCCGGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:1065136/137‑1 (MQ=255) aacaaaaCAGCCATCAGGGGCTTATAAAAAAAGCATTGAACCCCCCTTCCAAACCACTCCTGGCCAGTCAGATTACAACCACCCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:1010236/137‑1 (MQ=255) ataaaaCATGCATCAGGGGGTTATTCAAAAAGTAATGAAGCTCCCTTCAAAAACCCTCCTGGCGAGTCAGATTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCa < 2:1089519/138‑1 (MQ=255) aGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCa > 2:1059231/1‑140 (MQ=255) aGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCa > 2:1059429/1‑140 (MQ=255) aGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCAACAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCa > 2:2408524/1‑140 (MQ=255) aaCATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACTTGCCTATGAACAGCTTGATGCTGAGGGCTATATCGTGAGCAAGcc > 2:632734/1‑140 (MQ=255) aaCATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGcc > 2:2190624/1‑140 (MQ=255) aatgaaacAGGGGCTTATTCAAAACGCAATCAAGATCCCTTCCAAAACAATCCTGGCGAGTCAGATTTCCATCATAAAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaa < 2:351497/133‑1 (MQ=255) aTCCGGGCCGAATACAAAAAGGACTGACGCTCCCTGCCAAACCCCGCCGGCCTAGTCACCTAACCACCAGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGc < 1:2801990/140‑1 (MQ=255) cGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGtt > 1:2780478/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCACGCCAAGAAGCGGATGGTTTg > 2:2955164/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:2562284/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:1999692/1‑140 (MQ=255) aaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTa > 2:878227/1‑140 (MQ=255) aaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTa > 2:834498/1‑140 (MQ=255) aaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTa > 1:495213/1‑140 (MQ=255) aaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTa > 1:173574/1‑140 (MQ=255) aaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTa > 2:3086225/1‑140 (MQ=255) aaaGGAATGAAGCTCCCCTCCAAAAGACTCCTGGCGAGTCAGCTTTCAATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCCAGCCAAGAAGCGGATGGTTTGCGGATTa > 2:1491522/1‑140 (MQ=255) ccTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGAttt > 1:249640/1‑140 (MQ=255) ccAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCg < 2:495437/140‑1 (MQ=255) caaaaaGACTCCGGGCGAGTCAGTTTTCCAACAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGACGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCg < 1:2968068/138‑1 (MQ=255) acAAAAGACTCCTGGCTTGTCTTGTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCg < 2:569324/139‑1 (MQ=255) cTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTaa > 2:1331274/1‑140 (MQ=255) ccTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTaaaa > 2:1942517/1‑140 (MQ=255) cTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc > 2:93649/1‑81 (MQ=255) cccaGTCAGCTTTCACACCGACACACGTCTGTAGAACCTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATAcc < 2:540004/137‑1 (MQ=255) aGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAg > 1:2061337/1‑140 (MQ=255) aGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAg > 1:326470/1‑140 (MQ=255) tCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGAtttt > 1:188814/1‑118 (MQ=255) tCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGAtttt < 2:188814/118‑1 (MQ=255) tCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAgcg > 1:2461855/1‑140 (MQ=255) aGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGAGTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCa > 1:343502/1‑140 (MQ=255) cTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATAGCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATGTTGCGTATCGTAAAATACCAAGCGCATc > 2:1501609/1‑140 (MQ=255) ttCCATTCGTCAAACGACTGTCGAACGTGCCTATGAACAGCTTGCTGCTGAGGGATATATCGTGAGCATGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTTCTTTTGCGTATCGTAAAATACCAAGCGGATCag < 2:185982/140‑2 (MQ=255) ttCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCACAGAAGCGGATGGTTTCCTGAGTATCATGATTCTGATTTTGCGTATCGGAAAATACCAAGCGCATCAc > 2:1393213/1‑140 (MQ=255) aTCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAg > 1:1714637/1‑140 (MQ=255) aTCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAg > 2:2583355/1‑140 (MQ=255) aTCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGAGTATCGTAAAATAACAAGCGCATCACCAAg > 2:2583345/1‑140 (MQ=255) | CGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAG > NZ_CP034943/548999‑549275 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |