| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,193,459 | C→G | 8.0% | E56Q (GAA→CAA) | htrB ← | serine protease Do‑like protein HtrB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,193,459 | 0 | C | G | 8.0% | 348.3 / 4.0 | 148 | E56Q (GAA→CAA) | htrB | serine protease Do‑like protein HtrB |
| Reads supporting (aligned to +/- strand): ref base C (57/69); new base G (13/2); total (76/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.45e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 148 total aligned reads displayed.
CCTGATTTTGGTCTGATGGCAGATAAGGCGCGATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCTGTATGTGAAGATTCTGTTTGATGTTGA > NZ_CP034943/3193321‑3193595 | ccTGATTTTGGTCTGATGGCAGATAAGGCGCGATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTGTGTCTTTTACATTTCt > 1:3107618/1‑140 (MQ=255) ttttGGTCTGATGGCAGATAAGGCGCGATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTGTCTGTCTTTTACATTTCTAAAGc > 1:830650/1‑140 (MQ=255) tttGGTCTGATGGCAGATAAGGCGCGATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTTTTTTTTAAAATAAGTTTCTGTCTTTTCCATTTGTatttca < 1:1307522/140‑6 (MQ=255) tttGGTCTGATGGCAGATAAGGCGCGATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTAATATAAGTTTCTGTCTTTTCCATTTGTatttca < 1:970488/140‑6 (MQ=255) gTCTGATGGCAGATAAGGCGCGATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAg < 2:279302/140‑1 (MQ=255) aTGGCAGATAAGGCGCGATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGtt > 2:2965812/1‑140 (MQ=255) aTGGCAGATAAGGCGCGATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTGTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGtt > 2:2477269/1‑140 (MQ=255) aGATAAGGCGCGATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCGTTTCCATTTGTAAAGCAGAAGCCGgttaaat > 1:1753096/1‑136 (MQ=255) gATAAGGCGCGATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTGTCACAGCCGTGTGGGTCTTTTCCATTTCTAAAGCAGAAGCCGTTGGATGt > 1:386192/1‑140 (MQ=255) aGGCGCGATGCCGAGCATCAGACGCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGGTTGTTGTCTTTTTTCACAGCGGTGTGTGTCTGTTCCAGTGCGAAACCCGAAGCCGGTTCCTggtgtc > 1:3061564/1‑135 (MQ=255) aGGCGCGATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGTAGCCGTTTCATGTTTTc > 2:2833577/1‑140 (MQ=255) aGGCGCGATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTc > 2:2460364/1‑140 (MQ=255) aGGCGCGATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTGTCTGTGTTTTCCATTTCTAAAGCAGAAGCCGGTTCATGTTTTc > 1:373788/1‑140 (MQ=255) ggCGCGATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTcc < 1:481939/140‑1 (MQ=255) gcgcGATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGGTTCGGTGTTTTCCATTTAGAAAGCAGAAGCCGGGTCATGTTTTccc > 1:342990/1‑140 (MQ=255) gcgATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTGTTTTCTTTTTTCACAGCCGTGTGTGTCGTTTCCATTTGTGAATGAGAATCCGTTTCCTGTTTTCCCGc > 1:268220/1‑140 (MQ=255) cgATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTGTTTTCCATTTCTAAAGCAGAAGCCGGTTCATGTTTTGCCGCt > 1:203596/1‑140 (MQ=255) cgATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCt < 1:1226287/140‑1 (MQ=255) aTGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCGGTCTTTTCCATTTCTAAAGCAGAAGGCGTTTCATGTTTTCCCGCTTc > 2:348178/1‑140 (MQ=255) ccGAGCATCAGACCCCCGCCGATAATCCCGGCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATa < 2:1613328/140‑1 (MQ=255) ccGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATa < 2:1382012/140‑1 (MQ=255) ccGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATa < 1:2178559/140‑1 (MQ=255) ccGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATa < 1:1931398/140‑1 (MQ=255) ccGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATa < 2:2094529/140‑1 (MQ=255) ccGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATa < 1:93964/140‑1 (MQ=255) ccGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATa < 2:444347/140‑1 (MQ=255) aGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTGTGTGTTTTGCATTTGTAAAGCAGAAGCCGGTTGATGTTTTCCCGCTTCATACGa > 1:1968892/1‑140 (MQ=255) aGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGa > 1:2084183/1‑140 (MQ=255) aGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTAATGTTTTCCCGCTTCATACGa > 1:553293/1‑140 (MQ=255) cAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAg > 2:1296046/1‑140 (MQ=255) cAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTGTGTGTGTTTTCCATTTGTAAAGCAGAAGCCGTTTGATGTTTTGCCGCGTCATACGAAAAAg > 1:1000935/1‑140 (MQ=255) cAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCGCCGGGTGTTTTCTTTTTTCACAGCGGTGTGTGTGTGTTCGAGGTGTAAAGCAGAAGCCGTTGGATGTTTTCACGCTTCATAAGAACCac > 1:809277/1‑139 (MQ=255) aGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAgg < 1:1892105/140‑1 (MQ=255) gACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCAATTCTAAAGCAGAAGCCGGTTCATGTTTTCCCGCTTCATACCAAACAGgc > 2:562248/1‑140 (MQ=255) ccgccgATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTACCGCTTCATACGAAACCGGCGCGTc > 2:2995633/1‑140 (MQ=255) cgccgATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTGTGTGTTTTGCATTTGTAAAGCAGAAGCCGGTTGATTTTTTGCCGCTTCAAACGAAACAGGCGCGTCa > 1:93127/1‑140 (MQ=255) cgccgATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTGGGTGGTTTGCCTTTCTAAAGCAGTAGCCGGTTCATGTTTTGCCGCTTCATTCGAAACAGGCGCGTCa > 1:2712428/1‑140 (MQ=255) cgccgATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCa > 2:729697/1‑140 (MQ=255) cgccgATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTGTCTGTCTTTTGCATTTCTAAAGCTCAAGCCGTTTGATGTTTTGCCGCTTCAGACGAAACAGGCGGGTCa > 1:2335290/1‑140 (MQ=255) cgccgATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGGGTGTGTGTTTTCCAATTGTAAAGCAGAAGCCGGTTCATGTTTTTCCGCGTCATACGAAACCGGCGCGtga > 1:466806/1‑138 (MQ=255) ccgATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTGTGTGTCTTTTGCATTTGTAAAGCAGAAGCCGGTTGATTGTTTGCCGCGTCATACGAAACAGGcgcggccag > 1:2346081/1‑135 (MQ=255) aTAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTGTCACAGCCGTTTCGGTCTTTTCCATGTCTAAAGCAGAAGCCGTTTCATGTTTTCACGCTTCCTACGAAAAAGGCGCGgcaagcaa > 2:1502834/1‑140 (MQ=255) aTCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAAttt < 2:140204/140‑1 (MQ=255) tCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTGCATTTCTAAAGCAGAAGCCGTTTCATGTTTTACCGCTTCATACGAAAAAGGCGAGTAAAGAAAttta > 2:1494863/1‑139 (MQ=255) tCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTACCGCTTCATAAGAAACAGGCGCCTCAAGCACTTTc > 2:823517/1‑140 (MQ=255) tCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCGGGCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTACCGCTTCATACGAAACAGGCGCGTCAAGCAATTTc > 2:1494714/1‑140 (MQ=255) tCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTGTCTGTCTTTTGCATTTATAAAGCACAACCCCTTTCAGGTTTTCCCGCGTCATACGAAACATGCGCGGCAAGCacattg > 2:819771/1‑135 (MQ=255) ccGCCTAAACTCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTCCATACGAAACAGGCGCGTCAAGCAATTTCTg < 2:1531827/140‑1 (MQ=255) gCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGtt < 1:2289636/140‑1 (MQ=255) gCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATAAGAAACAGGCCCGGCCAGCAAATTCtttt > 2:1171697/1‑140 (MQ=255) aaaaTCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGt < 1:1056680/140‑1 (MQ=255) aGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAATCACTATCCGATTCATTTTTTCACGCTTCATCCGAAACAGGCCCGTAAAGCAATTTCTGTTCAGTATGTTCAATCgg > 2:1120243/1‑140 (MQ=255) aGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCgg > 2:425441/1‑140 (MQ=255) gCCATGCGGCTGTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTGTTTTGCATTTCTAAAGCAGAAGGCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAAGTTCTTTTCAGTATTTTCAATAGGc > 2:2304474/1‑140 (MQ=255) tGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTGTGTGTTTTCCATTTCTAAAGCAGAATCCGTTTGATTTTTTGCCGCGTCATACGAAACAGGCGCGTCAAGCAATTTGTTTTGATTATGTTGAATAGGCTGcc > 1:1408519/1‑140 (MQ=255) gCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTATGTCTTTTCCATTTCTAAAGCAGAAACCGTTTCATTTTTTACCGCTTCAAAAGAAACAGGCGCGTCAAGCAATTTCTTTTCAGTATTTTCAATAGGCTGCCg > 1:1460118/1‑140 (MQ=255) gCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTGTGGGTCGTTTGCAATTGTAAATCAGAATCCGTTTGATTTTTTCCCGCTTCATAAGAAACACGCGCGTCAAGCCATTTATGTTGAGTATTTTAAATCTGCTGCCg > 1:1949321/1‑140 (MQ=255) ggCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGt < 1:1296046/140‑1 (MQ=255) ggCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGt < 1:2560265/140‑1 (MQ=255) ctctCCGTTTCTTTTCTTTTTTCACAGCCGTTTGTGTGTTTTGCATTTGTAAAGCAGAAACCGGTTCATGTTTTGCCGCGTCATACCAAAAAGGCGCGTCAAGCAAATTCTGTTGAGTATGTTAAAAAGGCTGGCgggtt > 1:153135/1‑137 (MQ=255) ctctCCGTTTCTTTTCTTTTTTCACAGCCGTTTGTGTGTTTTGCATTTCTAAAGAAGAAGACGTTTCATTTTTTTCCGCTTCATACGAAACAGGCGCGTGAATCAAATTTTGTTTATTATTTTCAATAGGCTGCGGGGTa > 1:2673028/1‑140 (MQ=255) ctctCCGTTTCTTTTCTTTTTTCACAGCCGTTTGTGTGGTTTGCATTTCTAAAGCACAAGCCGTTTGATGTTTTACCGCTTCATAACAAACAAGCGCGTCAAGCAATTTGTGTTGAGTATGTTAAAACGGCTGGCGGGTa > 1:18492/1‑140 (MQ=255) ctctCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCa > 2:363286/1‑101 (MQ=255) ctctCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCa < 1:363286/101‑1 (MQ=255) ctctCCGTTTCTTTTCTTTTTTCACAGCCGTGTCTGTATTTTCCATTTGAAAAGCAGAATCCGTTTCATGTTTTGCCTCGTCATAAGAAACAGGCGCGTCAAGCAATGTATGTTGAGGTTGTTAAATCGGCTGGCGGGTa > 1:1803920/1‑140 (MQ=255) tctcCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTAt < 1:1676074/140‑1 (MQ=255) tctcCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTAt < 2:2556758/140‑1 (MQ=255) tctcCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTAt < 1:896993/140‑1 (MQ=255) ctcCGTTTCTTTTCTTTTTTCACAGCCGTTTCGGTCTTTTCCATTTATAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTAAAAAGAAACAGGCGCGTCAAACAAATTCTGTTCAGTATGTTAAAACGGCTGGCGGTTAtt > 2:8250/1‑140 (MQ=255) ggttcttttcttTTGTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTa < 2:2768069/138‑1 (MQ=255) gTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGTAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGTGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTa < 1:1211262/140‑1 (MQ=255) gTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTa < 1:538240/140‑1 (MQ=255) gTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTa < 2:100901/140‑1 (MQ=255) gTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTa < 2:2439894/140‑1 (MQ=255) gTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTa < 1:2460364/140‑1 (MQ=255) ttttcttttTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTg < 1:2903327/140‑1 (MQ=255) ttttcttttTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTACCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTg < 1:2995633/140‑1 (MQ=255) ttttcttttTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTGTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTg < 1:1976742/140‑1 (MQ=255) ttcttttTTCACAGCCGTTTGTGTGTTTTACAATTCTAAACCACAAGCCGTTTAATGTTTTCCCGCTTCAAAAGAAACACGCGCGTCAACCAATTTCTGTTGAGTATGTTCAATCGGCGGCCGGTTATTTTTATTGTGAt > 2:296066/1‑140 (MQ=255) ttcttttTTCACAGCCGTTTCTGTCGTTTAAATTTATAAAGCACAAGCCGTTTAATGTTTTCCCGCTTCATACTAAACAGGCCAGTAAAGCAATTTATGTTCAGTATTTTCAATAGGATTCCGGTTAATTGTAATATGAt > 2:190794/1‑140 (MQ=255) ttcttttTTCACAGCCGTTTCTGTATTTTCCATTTCTAAAACAGAATCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCCCGTCAAGCAAATTATGTTCAGTATGTTAAAACGGCTGCCGGTTAATTTTATTCTGAt > 2:1744932/1‑140 (MQ=255) ttttttCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGtt < 1:1453483/140‑1 (MQ=255) tttttCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTc < 2:2106890/140‑1 (MQ=255) ttgttCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGACGTTTCATGTTTTCCCGATTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGtta < 2:3051506/137‑2 (MQ=255) tCACCGCCGTTTCTGTCTGTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTGCCCGATTCATACGTTACAGGCGCGTCAAGCAATTTATGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCGGTa < 2:2548859/140‑1 (MQ=255) tCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCTGTa < 2:1678507/140‑1 (MQ=255) tCACAGCCGTTTCTGTCTTTTCCATGTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCTGTa < 2:2546648/140‑1 (MQ=255) tttCGGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTATGTTCAGTATGTTCAATCGGCTGACGGTTATTTGTATTCTGCTGTTCTGTATGTGAAGAt > 2:130620/1‑140 (MQ=255) ttCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCTGTATGTGAAGAtt < 1:2787778/140‑1 (MQ=255) ttCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCTGTATGTGAAGAtt < 1:2394019/140‑1 (MQ=255) ttCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCTGTATGTGAAGAtt < 2:2888437/140‑1 (MQ=255) ttCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCTGTATGTGAAGAtt < 1:1418407/140‑1 (MQ=255) ttCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCTGTATGTGAAGAtt < 2:790147/140‑1 (MQ=255) ttCTGTCTTTTCCATATCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCTGTATGTGAAGAtt < 2:2286322/140‑1 (MQ=255) gtCTGTCGTTTCCATGTCTAAATCAGAAGCCGGTGCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCTGTATGTGAAGAtt < 1:1597317/139‑1 (MQ=255) tCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCTGTATGTGAAGATTCTGtt < 1:425441/140‑1 (MQ=255) tCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGATTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCTGTATGTGACGATTCTGtt < 1:1120243/140‑1 (MQ=255) ttCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCTGTATGTGAAGATTCTGTTTGAt > 2:2727514/1‑140 (MQ=255) tCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCTGTATGTGAAGATTCTGTTTGATg > 1:1885684/1‑140 (MQ=255) tttCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCTGTATGTGAAGATTCTGTTTGATGTTGa < 1:243324/140‑1 (MQ=255) | CCTGATTTTGGTCTGATGGCAGATAAGGCGCGATGCCGAGCATCAGACCCCCGCCGATAATCCCGCCTAAAATCGGGCTCAGCCATGCGGCTCTCCGTTTCTTTTCTTTTTTCACAGCCGTTTCTGTCTTTTCCATTTCTAAAGCAGAAGCCGTTTCATGTTTTCCCGCTTCATACGAAACAGGCGCGTCAAGCAATTTCTGTTCAGTATGTTCAATCGGCTGCCGGTTATTTGTATTCTGATGTTCTGTATGTGAAGATTCTGTTTGATGTTGA > NZ_CP034943/3193321‑3193595 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |