BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	607,322	G→C	5.5%	A55A (GCG→GCC)	EO946_RS03185 →	collagen‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	607,322	0	G	C	5.5%	357.7 / 3.4	138	A55A (GCG→GCC)	EO946_RS03185	collagen‑like protein
Reads supporting (aligned to +/- strand): ref base G (51/77); new base C (2/8); total (53/85)
Fisher's exact test for biased strand distribution p-value = 3.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 138 total aligned reads displayed.

GCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCC  >  NZ_CP034943/607185‑607460

gCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGAc                                                                                                                                          <  1:492062/140‑1 (MQ=255)

gCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGAc                                                                                                                                          <  2:824707/140‑1 (MQ=255)

gCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGAc                                                                                                                                          <  2:2126738/140‑1 (MQ=255)

gCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGAc                                                                                                                                          <  2:374253/140‑1 (MQ=255)

 cTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGCGCTACCGGGGACGCTGGACCAGCAGGAGCGTCGGGCGCGACa                                                                                                                                         >  1:1838501/1‑140 (MQ=18)

   aCCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCGACGGGAGCTACCGGGGAAGCGGGACAAGCCGGAGCGACGGGAGCGACAgg                                                                                                                                       >  1:444293/1‑140 (MQ=255)

   aCCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAgg                                                                                                                                       <  1:908367/140‑1 (MQ=255)

   aCCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAgg                                                                                                                                       <  2:1020258/140‑1 (MQ=255)

   aCCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAgg                                                                                                                                       <  1:2587095/140‑1 (MQ=255)

    ccGGGGCACCCGGACCACCCGGGGCCCCAGGAGCCACCGGAGCTACTGGGGAACCCGGACCAGCCGGACCAGCCGGAGCCACGGGAGCCACCGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGa                                                                                                                                      <  2:248665/140‑1 (MQ=14)

        ggAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTa                                                                                                                                  <  2:1683051/140‑1 (MQ=255)

        ggAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTa                                                                                                                                  <  2:1924313/140‑1 (MQ=255)

           aGCCGGACCAGCCGGGGCGACAGGAGCCACCGGAGCTCCGGGGGAAGCGGGACCAGCCGGACCAGCCGGCGCGACGGGCGCGACCGGAGCAACCGGGGCAGCTGGCCCAGCCGGCGCGAGGGGGGGGGCCGGAGCTGCCg                                                                                                                               >  2:2825205/1‑140 (MQ=19)

            gCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACGGGGTAAGCAGGACAGTCCGGACCAGCCGGAGCGCCGGGATCCACGGGAGGTACCGGGGAAGCAGGACCAGCCGGGGCGACGGGAGCGACGGGAGCGAGCgg                                                                                                                              >  2:724692/1‑140 (MQ=255)

                          ggCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAagccggaccag                                                                                                                <  1:260253/140‑1 (MQ=255)

                              aCAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGAGGGGAGCGACAGGAGCTACCGGGGAtgccggaccagccgg                                                                                                            <  1:2131508/140‑1 (MQ=255)

                              aCAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAagccggaccagccgg                                                                                                            <  1:846142/140‑1 (MQ=255)

                              aCAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAagccggaccagccgg                                                                                                            <  1:2755877/140‑1 (MQ=255)

                               cAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAagccggaccagccgga                                                                                                           <  1:1013779/140‑1 (MQ=255)

                               cAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAagccggaccagccgga                                                                                                           <  1:1010133/140‑1 (MQ=255)

                               cAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAagccggaccagccgga                                                                                                           <  1:1538953/140‑1 (MQ=255)

                               cAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAagccggaccagccgga                                                                                                           >  2:205174/1‑140 (MQ=255)

                                    gCCTCGGGAGCTAATGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGATACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAAc                                                                                                      <  2:1902071/140‑1 (MQ=255)

                                    gCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAAc                                                                                                      <  2:570290/140‑1 (MQ=255)

                                    gCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAAc                                                                                                      <  2:3074999/140‑1 (MQ=255)

                                    gCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAAc                                                                                                      >  1:2327373/1‑140 (MQ=255)

                                       aCGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCgg                                                                                                   >  1:1174673/1‑140 (MQ=255)

                                       aCGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACCGGAGCAACCGCGGCAGCACGACCATCCGGAGCGACCGGAGCGACAGGAGCTACCGGTCACTCCGCCCCGGCCCGAGCAACCgg                                                                                                   >  2:1615874/1‑140 (MQ=14)

                                       aCGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACCGGAGCCACGGGAGCTCCCGGGGAAGCGGGACCAGCCGGAGCGACGGGAGCGCCCGGAGCTACCGGGGAAGCCGGACCCGCCGGAGCAACggg                                                                                                   >  2:1266019/1‑140 (MQ=17)

                                       aCGGGAGCTACTGGGGAAGCAGGACCATCCGGACCATCCGGAGCGACGGGAGCCACCGGAGCTACCGGGGAAGCAGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACAGGTGAAGCCGGACCATCAGGACAAACCga                                                                                                   >  1:1618457/1‑139 (MQ=17)

                                        ggggAGCGACTGGTGACTGGGGACCAGGCGGCCCAGCGGTAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGa                                                                                                  <  2:458730/139‑1 (MQ=17)

                                        cGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGAGACACGAGCTACCGGGGAAGCCGGACCAACCGGAGCCACTGGa                                                                                                  >  2:737313/1‑140 (MQ=17)

                                          ggAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCCACCGGCGCTCCCGGGGAAGCCGGACCAGCCGCACCCACCGGAGc                                                                                                >  2:417285/1‑140 (MQ=18)

                                              cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTTGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                                                                                            >  1:144696/1‑140 (MQ=255)

                                              cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                                                                                            >  2:1193419/1‑140 (MQ=255)

                                              cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                                                                                            <  2:2960822/140‑1 (MQ=255)

                                              cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                                                                                            >  1:1493236/1‑140 (MQ=255)

                                              cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                                                                                            <  1:1193419/140‑1 (MQ=255)

                                              cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                                                                                            <  1:1050464/140‑1 (MQ=255)

                                              cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCACCCGGAGCGAGGGGAGCGACAGGAGCTAGGGGGGAAGCCGGACCTGCGGGACCGACCGGAGCGACg                                                                                            >  2:610039/1‑140 (MQ=21)

                                              cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCAGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                                                                                            >  1:196255/1‑140 (MQ=255)

                                              cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACAGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                                                                                            <  2:1015413/140‑1 (MQ=255)

                                                   ggggAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGTGCTACCGGGGAAGCGGGACCAGCCGGAGCGACGGGAGCGACAGGTGCTACCGGGGCAGCCGCGCCAGCCGGACCACCCGGTGCGACGGGAGc                                                                                       >  2:1478558/1‑140 (MQ=18)

                                                   ggggAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCGGGAGCCACGGGAGCGACAGGAGCGACCGGGGAAGCCGGACCATCCGGTGCAACCGGAGCCACAGGGGc                                                                                       >  2:2422823/1‑140 (MQ=14)

                                                         gCTGGACCAGCCGGACCAGCCGGCGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACggg                                                                                 <  1:1175767/140‑1 (MQ=255)

                                                         gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCGCCCGGTGATACACCTGAACCAGCACCAGACGGAGCTGCCTGAGCGTCAGGAGCTACCGGGGAAGCCGGACCAGCCGGCCCGGCCGGAGCGCCGGGCGCGACggg                                                                                 >  1:55580/1‑140 (MQ=12)

                                                         gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCGACGGGAGCTACCGGTGACGGTGGACCAGCCGGAGCGACCGGAGCGCCAGGAGCTACAGGTGAAGCCGGACCAGCCGGAGCTGCCGGAGCGCCGGGAGCGACggg                                                                                 >  1:1686919/1‑140 (MQ=17)

                                                         gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACggg                                                                                 <  1:234814/140‑1 (MQ=255)

                                                         gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACggg                                                                                 <  1:2977448/140‑1 (MQ=255)

                                                         gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACCGGAGCCACggg                                                                                 >  1:2829874/1‑140 (MQ=255)

                                                         gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACCGGAGCGACGGGCGCCCCggg                                                                                 >  1:2089269/1‑140 (MQ=255)

                                                         gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCAGGACCAGCCGGAGCGACGGGAGCCCCAGGAGCTACCGGGGAAGCCGGAGCGCCCGGAGCCCCAGGAGCGACAGGAgaagccgg                                                                                 >  2:2077710/1‑133 (MQ=17)

                                                           tGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGCGGGCTACCCGGGACGCAGGACCATCCGGAGCGAGGGGCGCGACAGGAGCTCCCTGGGAAGCCGCACCCGCCGGACCGCCGGGGGCGCCGGGAGCGGCGGGAg                                                                               >  2:2962353/1‑140 (MQ=16)

                                                                   ccggaccagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCggg                                                                       >  1:1253751/1‑140 (MQ=255)

                                                                   ccggaccagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCggg                                                                       <  1:409993/140‑1 (MQ=255)

                                                                       accagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAag                                                                   <  1:1151567/140‑1 (MQ=255)

                                                                           gcgggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccgg                                                               <  2:2513327/137‑1 (MQ=255)

                                                                           gccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACGGGAGCGACGGGCGCGCCGGGAGCTACCGGGGAcgccgg                                                               >  2:2637538/1‑140 (MQ=18)

                                                                           gccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGCGCGACGGGAGCTACCGGGGAagccgg                                                               >  2:148488/1‑140 (MQ=255)

                                                                           gccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCGACGGGTGCTCCCGGGGCagccgg                                                               >  2:2969697/1‑140 (MQ=255)

                                                                            gcggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccgga                                                              <  1:312615/139‑1 (MQ=255)

                                                                            ccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccgga                                                              <  1:1304044/140‑1 (MQ=255)

                                                                            ccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccgga                                                              >  1:156580/1‑140 (MQ=255)

                                                                            ccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccgga                                                              >  1:2093829/1‑140 (MQ=255)

                                                                            ccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccgga                                                              <  1:2333646/140‑1 (MQ=255)

                                                                            ccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGCGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAcgccggc                                                              >  1:856734/1‑139 (MQ=255)

                                                                                    aCGGGAGCCACGGGAGCTCCCGGGGAAGCGGGACCCGCCGGAGCGACGGGAGCGCCCGGAGCGACCGGGGCAGCCGGCCCAGCCGCACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccagccgg                                                      <  2:1402809/140‑1 (MQ=17)

                                                                                    aCGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGTCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccagccgg                                                      <  1:16712/140‑1 (MQ=255)

                                                                                    aCGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccagccgg                                                      <  1:2203491/140‑1 (MQ=255)

                                                                                           ccACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAAcc                                               <  1:714317/140‑1 (MQ=255)

                                                                                                   gCTCCCGGTGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgag                                       <  2:2773332/140‑2 (MQ=255)

                                                                                                   gCTCCCGGGGAAGCTGGACCAGCCGGACCGACGGGAGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgac                                       <  2:1242942/140‑1 (MQ=255)

                                                                                                     tACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGAc                                                                                                                                          >  2:1405159/1‑39 (MQ=40)

                                                                                                     tACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacag                                     >  2:922812/1‑140 (MQ=255)

                                                                                                      tccGGTGAAGCGGGACCAGCCGGAGCGACGGGAGCCACAGGAGCTACCGGGGAAGCCGGCCCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacagg                                    <  2:1108713/139‑1 (MQ=17)

                                                                                                      aCCGGGGAAGCGGGACCAGCCGGTGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacagg                                    <  1:958499/140‑1 (MQ=255)

                                                                                                      aCCGGCCAAGCTGGACCAGCCGGAGCGCCGGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGCGCGACGGGAGCCACGGGAGCGACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacagg                                    <  2:553476/140‑1 (MQ=17)

                                                                                                           ggAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACggg                                                                                 >  1:1947300/1‑90 (MQ=255)

                                                                                                           ggAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcga                               <  1:967009/140‑1 (MQ=255)

                                                                                                            gcaccaggACCACACGGACCCCCGGGAGCCAAAGGAGCAACCGGAGCACAAGGCCCAGCCGGACCCCCCGGCGCGACGGGAGCCACTGGAGCTACCGGGGAAGCCGGACCAGCCGGCCCAACCggagcgacaggagcgac                              <  2:1535849/134‑1 (MQ=9)

                                                                                                            gcaGCTGGACCAGGCGGAGCGAGTGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcgac                              <  2:1846781/138‑1 (MQ=17)

                                                                                                            gcaGCGGGACCAGCCGGAGCGACGGGAGCGACCGGAGCGACCGGTGAACCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcgac                              <  2:1774414/138‑1 (MQ=17)

                                                                                                            gAAGCTGGACCAGCCGGAGCGACGGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGCGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcgac                              <  2:313376/140‑1 (MQ=255)

                                                                                                            gAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcgac                              <  1:2197648/140‑1 (MQ=255)

                                                                                                            gAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcgac                              <  1:2145559/140‑1 (MQ=255)

                                                                                                            gAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGAGCAGCCGGACCAGCCGGTCCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcgac                              <  2:416724/140‑1 (MQ=255)

                                                                                                            gAAGCGGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGCAGCCGGACCAGCCGGACCAACCggagcgacaggagcgac                              <  2:2217379/140‑1 (MQ=255)

                                                                                                               gCTGGACCAGCCGGAGCGCCGGGACCGACAGGAGCTACCGGGGAAGCCGGACAACCCGGACCAACCGGCGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACAAACCGGagcgacaggagcgacagg                           <  1:1026763/140‑1 (MQ=17)

                                                                                                               gCTGGACCAGCCGGAGCGACTGGAGCGACAGGAGCTACCGGTGAAGCCGGACCAGCCGGACCAACGGGAGGGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGagcgacaggagcgacagg                           <  2:1670657/140‑1 (MQ=255)

                                                                                                                    accccccGGAGCGACGGGCGCGACCGGAGCTCCCGGGGACGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTa                      <  2:2327373/135‑1 (MQ=14)

                                                                                                                    aCCAGCCGGAGCGACGGGAGCCACAGGAGCGACCGGGGAACCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTa                      <  2:2916971/140‑1 (MQ=255)

                                                                                                                        gCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCgg                  >  2:511110/1‑140 (MQ=255)

                                                                                                                         ccGGATCGCCGGGAGCGACAGGAGCTACCGGTGAAGCCGGACAAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCggg                 <  1:2310907/140‑1 (MQ=255)

                                                                                                                         ccGGAGCGCCGGGCGCCACAGGAGCGACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCggg                 <  1:45853/140‑1 (MQ=255)

                                                                                                                         ccGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCTGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCggg                 <  2:2577690/140‑1 (MQ=255)

                                                                                                                         ccGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGCAGCGACAGGAGCGACAGGAGCTACCggg                 <  2:695156/140‑1 (MQ=255)

                                                                                                                             aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCCCGGGAGCTCCCGGGGCCGCCGGACCCGCCGGACCAACCGGAGCGGCAGGAGCGCCAGGAGCGACGGGGGAAg             >  1:1984648/1‑140 (MQ=17)

                                                                                                                                      aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGACGCCGGACCCGCCGGACCAACCGGAGCGACCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAg    >  2:1832273/1‑140 (MQ=255)

                                                                                                                                        cGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGCGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCGACCGGGGACGCCGGACCCGcc  >  1:2135716/1‑140 (MQ=255)

                                                                                                                                        cGACAGGAGCTACCGGGGAACCCGGACCAGCCCCACAAACCGGAGCCACGGGAGCCCCGGCAGAAACCGGGGACGCCGGACCAGCCGGACCACCCGGCGCGGCCGGAGCGACAGGAGCTCCCGGGGCCGCCGGACCGGcc  >  1:1110967/1‑140 (MQ=19)

GCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCC  >  NZ_CP034943/607185‑607460

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`