| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | 607641 = | 187 (0.850) | 3 (0.010) | 3/258 | 10.0 | 1.7% | coding (484/1125 nt) | EO946_RS03185 | collagen‑like protein |
| ? | NZ_CP034943 | = 607685 | 162 (0.760) | coding (528/1125 nt) | EO946_RS03185 | collagen‑like protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP034943/607783‑607641‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctccTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCAGTAGCCCCTGTGGCTCCCGTGGCCCCGGCTGGTCCGGC < NZ_CP034943/607685‑607548 ACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGGGGGTCCGGCTTCCCCGGAAGCGCCTGGCGC > 2:883223/1‑140 CTTCCCCGGTAGCTCCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCT < 2:520544/62‑1 CCCGGTAGCTCCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCcg > 1:2781768/1‑57 CCCGGTAGCTCCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCcg < 2:2781768/59‑3 cctGTTGGTCCGTCTGCGCCTGTTGCCCCGGTCGCTCCTGTAGCTCCGGGTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCAGT < 2:1115054/137‑1 gCCTGTCGCTCCGGGGGCTCCTGTTGGTCCGGCGTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCAGTAGCCCCTGTGGCTCCCGTGGCCCCGG < 1:2705619/139‑1 CTCCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGGAGCGCCTGTCGCTCCGGCTGGTCCGGCTTCCCCCGTAGCCCCGGTGGCACCCGTGGCCCCGGAGGGTCCG > 1:791895/1‑140 CCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCAGTAGCCCCTGTGGCTCCCGTGGCCCCGGCTGGTCCGGC > 1:1716185/1‑140 CCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTT > 1:64209/1‑97 CCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTT < 2:64209/97‑1 CCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGT < 2:2092560/41‑1 CCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCGCCTGTCGCTCCGGCTGGTCCGGCGTCCCCGGTAGCTCCGGTCGCTCCGGCTGGTCCGGCTTCGCCCGTCGCGCCTGTGGCGCCCGTGGCCCCGGCTGGTCCGGC > 2:2162107/1‑140 ACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP034943/607783‑607641‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctccTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCAGTAGCCCCTGTGGCTCCCGTGGCCCCGGCTGGTCCGGC < NZ_CP034943/607685‑607548 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |