Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943634,0540CG39.5% 211.4 / 77.5 159E573Q (GAA→CAA) ‡EO946_RS03330ABC‑F family ATP‑binding cassette domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (28/67);  new base G (62/0);  total (92/67)
Fisher's exact test for biased strand distribution p-value = 5.56e-22
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 167 total aligned reads displayed.

TGCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAA  >  NZ_CP034943/633917‑634190
                                                                                                                                         |                                                                                                                                        
tGCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGttctt                                                                                                                                        >  2:2263654/1‑140 (MQ=255)
  cATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTGTTCAATCCGACGGAGTCGTTGGGGgtctttg                                                                                                                                      >  1:1998406/1‑139 (MQ=255)
  cATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGttctttc                                                                                                                                      <  2:2369518/140‑1 (MQ=255)
   atggatggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGttctttct                                                                                                                                     <  2:2412335/140‑1 (MQ=255)
        tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTCTTTTTc                                                                                                                                >  2:1065085/1‑140 (MQ=255)
          gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCa                                                                                                                              <  2:2617379/140‑1 (MQ=255)
          gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTGTTTTTGCa                                                                                                                              >  1:3228631/1‑140 (MQ=255)
          gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGGATTTGTTTTTACa                                                                                                                              >  1:3053292/1‑140 (MQ=255)
          gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGTTTGTTTTTGCa                                                                                                                              >  1:1024115/1‑140 (MQ=255)
           cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                             <  2:3229948/140‑1 (MQ=255)
            ttGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGCGTTCTTTTTcgaga                                                                                                                            >  2:1136354/1‑136 (MQ=255)
            ttGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGGTTCTTTTTACAtt                                                                                                                            >  2:1805962/1‑140 (MQ=255)
             tGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGtttttggattg                                                                                                                           >  1:2975735/1‑134 (MQ=255)
              gTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCt                                                                                                                          <  2:2392870/140‑1 (MQ=255)
               tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCGTTATTTTTGCAATCtt                                                                                                                         >  2:113690/1‑140 (MQ=255)
               tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTGCTTTCTTTTTCCattatt                                                                                                                         >  2:284504/1‑140 (MQ=255)
                  cTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCttttt                                                                                                                      <  1:1907342/140‑1 (MQ=255)
                   ttttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttc                                                                                                                     <  1:1168361/140‑1 (MQ=255)
                   ttttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttc                                                                                                                     <  1:2414402/140‑1 (MQ=255)
                    tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGGGTTGTTTGTTTTTGAAGTCTTTttct                                                                                                                    >  1:252333/1‑140 (MQ=255)
                    tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTCGAATCtttttat                                                                                                                    >  2:2973776/1‑138 (MQ=255)
                    tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGGTTGTTTTTACAATAtttttgt                                                                                                                    >  1:3108761/1‑138 (MQ=255)
                     ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTGTTTGTTTTTGCAATATTTttatt                                                                                                                   >  2:1448997/1‑140 (MQ=255)
                     ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTCTTTttgtt                                                                                                                   >  2:2912952/1‑140 (MQ=255)
                     ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGCATGATTTttgtt                                                                                                                   >  2:724767/1‑140 (MQ=255)
                     ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGGTTGTTTTTGCATTGATTttctt                                                                                                                   >  2:466270/1‑140 (MQ=255)
                     ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTGTCTTTTTGCCTTCTTTttgtt                                                                                                                   >  2:1901425/1‑140 (MQ=255)
                           gTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGGTTATTTTTGAAATCTTTTTGTTCTTCat                                                                                                             >  1:1601811/1‑140 (MQ=255)
                                     aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTGCATTGTTTTTATTCTTCATATGAACGttt                                                                                                   >  2:1683400/1‑140 (MQ=255)
                                      tttCCGGATCACATAGCAATTCATCGTTATGAGTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCTTTGTTTTTCCATTCTTTTTCTTCTTCATATGAACCtttt                                                                                                  >  2:143239/1‑140 (MQ=255)
                                      tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTGTTCTTGATATGAACTtttt                                                                                                  >  2:795471/1‑140 (MQ=255)
                                      tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTACATTATTTTTATTCTTCAAATGAACGtttt                                                                                                  >  2:1577451/1‑140 (MQ=255)
                                      tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGGTTTTTTTTGCATTATTTTTATTGTTAATATTAACGtttt                                                                                                  >  1:280917/1‑140 (MQ=255)
                                        tCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGGTTTTGCATTATTTTTATTGTTGAAATTAAAGtttttt                                                                                                >  1:287994/1‑138 (MQ=255)
                                          cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                              <  1:1805962/140‑1 (MQ=255)
                                          cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                              <  1:1388348/140‑1 (MQ=255)
                                          cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                              <  2:1134643/140‑1 (MQ=255)
                                          cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                              <  1:267469/140‑1 (MQ=255)
                                              tCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAgg                                                                                          <  2:2402631/140‑1 (MQ=255)
                                               cacaTAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGc                                                                                         <  1:724767/140‑1 (MQ=255)
                                                         ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTCTTTTTACATTGTGTTTGTTATTGAGATGAACGTTTTTAGTGAGGGTTTAACGAAg                                                                               >  1:2739869/1‑140 (MQ=255)
                                                         ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGCATTGTTTTTGTTCTTCATATGAACGTTTTGATTGAGGCTTaaaagaat                                                                               >  2:2779518/1‑134 (MQ=255)
                                                           cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTAGATTCTTTTTGTTATTCATATGAACGGTTTGAGTCAGGCTTTACCGAAGcc                                                                             >  2:1956772/1‑139 (MQ=255)
                                                           cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTGCATTATTTTTCTTCTTCATATTAAAGTTTTTAGTAAGGCTTAAccctgtct                                                                             >  2:3364071/1‑134 (MQ=255)
                                                              cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTCGTTGTTTTTCCATTCTTTTTCTTCTTCATATGAACCTTTTTAGTAAGGCTTAACCGAAGCAGGc                                                                          >  2:2834917/1‑140 (MQ=255)
                                                              cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTGCATTATTTTTATTCTTAATATGTACGTTTTTGGTGAAGGTTAAACGAACAAGGc                                                                          >  2:1522451/1‑140 (MQ=255)
                                                                ttATGACTAATTTTTTCTTCAAGGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGGTTTTGTTTTTACCATATTTTTATTATTGATATTTACTGTTTGAGTCAGGCTTAAACGAAGCAGGCgg                                                                        >  1:816299/1‑139 (MQ=255)
                                                                   tGACTGATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGGGTTTGTTTTTGCCATATTTTTGTTGTTGATATTAAAGTTTTGTGTGAGGGTTTAACCAAACAGGGGgttt                                                                     >  1:1428841/1‑140 (MQ=255)
                                                                   tGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTGCGTTGTTTTTCTTCTTAATATGAACGTTTTTTGTCAGGCTTAAACGAAGCAGGCGtttt                                                                     >  2:3158988/1‑140 (MQ=255)
                                                                        aaTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCTTTCTTTTTACATTATTTTTATTCTTCATATTAAACTTTTTATTGAGGCTTAAACCAAGCAGGCGGTTTTTTgg                                                                >  2:2947884/1‑140 (MQ=255)
                                                                         attttttCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCGTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                               <  2:1335102/137‑1 (MQ=255)
                                                                         aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                               <  1:35406/140‑1 (MQ=255)
                                                                         aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                               <  1:2375852/140‑1 (MQ=255)
                                                                         aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTCCATTCTTTTTCTTCTGCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                               <  1:2280539/140‑1 (MQ=255)
                                                                         aTGTTTTCTTCAATGGTTTGAACAGGGGCGTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAGTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                               <  1:559403/140‑1 (MQ=255)
                                                                         aTGTTTTCTTCAATGGTTCGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGGTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                               <  2:2706875/140‑1 (MQ=255)
                                                                          tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCCTTGTTTTTTTTCTTGATATGTATGTTTTTTTTGAGGCGTAACCGGAGCAGGGGTTTTTTgggtt                                                              >  1:113575/1‑138 (MQ=255)
                                                                          tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTCCATTCTTTTTGTTCTTCATATGAAAGTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTCGGAt                                                              >  2:2632593/1‑140 (MQ=255)
                                                                          tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTATTTTTGCATTGTTTTTATTCTTCATATGAAAGTTTTTATTAAGGCTTAACCGAAGCAGGGGTTTTTTAGGAt                                                              >  2:2175615/1‑140 (MQ=255)
                                                                          tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGGTGGCGGTGTTTCTTTTTCCAATCTTTTTATTCTTAATATGAACGTTTTGATTCAGGCTTAACAGAAGCAGGCGTTTTTTCGGAt                                                              >  2:2332331/1‑140 (MQ=255)
                                                                          agTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGCAATCTTTTTATTATTGATATGAACGTTTTTAGTCAGGCGTAAACGCAGCAGGCGTGTTTTAGGag                                                              >  2:564541/2‑139 (MQ=255)
                                                                              ttcttcAATGGTTTGAACAGTGTCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGCCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCct                                                          <  1:2084259/140‑1 (MQ=255)
                                                                              ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTACATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCATAAACCAAGCAGGCGTTTTTTCGGATTCct                                                          >  2:1709836/1‑140 (MQ=255)
                                                                              ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCct                                                          <  1:1709836/140‑1 (MQ=255)
                                                                              ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTCCATTATTTTTGTTATTAATAATAAAGTTTTTAAGAATGCTTTAACGAATCAGGCGTTTTTTGGGAttgat                                                          >  2:2084259/1‑137 (MQ=255)
                                                                              ttcttcAATGGTTGGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCct                                                          <  1:2853233/140‑1 (MQ=255)
                                                                                       ggTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGAt                                                 <  1:1501870/140‑1 (MQ=255)
                                                                                             aaCAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTCCAGTCTTTTTCTTCTTCATATGAACGGTTTTTGTGAGGGTTTAACGAACCCGGCGTTTTTTTGGGTTGCTCTTGGTGCttgtgtt                                           >  1:1896694/1‑135 (MQ=255)
                                                                                                aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct                                        <  1:3064492/140‑1 (MQ=255)
                                                                                                  tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGGGTTCTTTCTTTTTCCATTCTTTTTCTTATTCCTATGAACGTTTTTAGTTAGGGATAACCCAAGCAGGCGTTTTTTGGGATGTCTGTTGCGGATTGATTTTATcc                                      >  2:2737760/1‑140 (MQ=255)
                                                                                                  tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTTTTTTTGCATTATTTTTATTGTTGATATTAACGTTTTTTGTGAGGCTTTAACCAAGCAGGCGTTTTTTAGGATTGCTCTTTATGATTGATTTtctac                                      >  2:1116767/1‑138 (MQ=255)
                                                                                                  tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCATTGTTTTTGTTATTGAAATTTAAGTGTTTATTGAGGGGTTAACGAATCAGGCGGTTTTTTGGGTTGCGCGTGGGGATTGAttttatgc                                      >  1:1495220/1‑136 (MQ=255)
                                                                                                  tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGGGGTTGTTTTTTCATTGTTTTTGTTGTTAATATGAAAGTTTTGTTGAAGGCTTAAACCAAGCAGGCGTTTTTTGGTGTTCCTCTTTGTGGTTGAttttttgc                                      >  1:2591704/1‑136 (MQ=255)
                                                                                                  tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTCTTTTTAGTCTTGATATTAACGTTTTTAGTGAGGCTTAACCGAAAGAGGCGTTTTTTAGGTTTGCTCTTGCTGATTAATTTTCTcc                                      >  2:1457656/1‑140 (MQ=255)
                                                                                                  tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGGTTTTTGTGATTGCTCTTGCTGATTCATTTTGTcc                                      >  2:1982559/1‑140 (MQ=255)
                                                                                                  tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTACATTGTTTTTCTTCTTAATATGAACGTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTGGGATTGCTCTTGGTGATTCATTTTGTcc                                      >  2:2552082/1‑140 (MQ=255)
                                                                                                  tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGCATTCTTTTTGTTCTTCATATGAACGTTTTTTGTCCGGCTTTACCGAAGCCGGCGTTTTTTCGGATTGCTCTTGGTGGTTCATTTTGTcc                                      >  1:2428516/1‑140 (MQ=255)
                                                                                                  tGGCTTCAATTTCTTCAATCCGACGGAGTCGTGTGCGGGGTTTATTTTTGCATTTTTTTTGTTGTTCATATTAACGTTTTTAGTCACGCTTAAACCAAACAGGCGTTTTTTAGGATTACTGTTTGTGATTAAttttatac                                      >  2:205498/1‑136 (MQ=255)
                                                                                                     cTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAAt                                   <  2:1100822/140‑1 (MQ=255)
                                                                                                          aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                              <  2:770000/140‑1 (MQ=255)
                                                                                                          aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                              <  1:908686/140‑1 (MQ=255)
                                                                                                          aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                              <  2:273571/140‑1 (MQ=255)
                                                                                                          aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                              <  2:657492/140‑1 (MQ=255)
                                                                                                              cttcAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTGTTTTTGTTCTTAATATGAAAGTTTTGAGTGAGGCTTAAACGAAGCAGGCGTTTTTTCGGATTCCTCTTTCTGATTAATTTTCTCCAATTAAAtctgg                          >  2:646626/1‑139 (MQ=255)
                                                                                                               ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                         <  2:3036985/140‑1 (MQ=255)
                                                                                                               ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAGTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                         <  1:3241564/140‑1 (MQ=255)
                                                                                                                         cGGAGTCGTTGGCTTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt               <  1:2175615/140‑1 (MQ=255)
                                                                                                                         cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt               <  2:44885/140‑1 (MQ=255)
                                                                                                                         cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt               <  1:563291/140‑1 (MQ=255)
                                                                                                                         cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTGCATCTGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt               <  1:68544/140‑1 (MQ=255)
                                                                                                                         cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTATTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt               <  2:1601811/140‑1 (MQ=255)
                                                                                                                         cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCATTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt               <  2:2014253/140‑1 (MQ=255)
                                                                                                                           gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct             <  1:1563944/140‑1 (MQ=255)
                                                                                                                           gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct             <  1:600235/140‑1 (MQ=255)
                                                                                                                           gAGTCGTTGGCGTTCTTTCTTTGTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct             <  1:682366/140‑1 (MQ=255)
                                                                                                                              tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg          <  1:1057374/140‑1 (MQ=255)
                                                                                                                                      gttgttTCTTTTTCCATTCTTTTTCTTCTTAATATGAACGTTTTGATTCAGGCTTTAACGAAGCAGGCGTTTTTTAGGATTACTCTTTCTGATTCATTTTATACAATTAAAGCTTCTCTGTTTTTTTATACGTAtaataa  >  2:985501/1‑140 (MQ=255)
                                                                                                                                      gTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTAGGATTCCTCTTTCTGATTCATTTTCTCCAATTCAAGCTGCTCTTTTTTTTTATACGTAtaataa  >  2:2322511/1‑140 (MQ=255)
                                                                                                                                      gTTCTTTCTTTTTCCATTCTTTTTCTTCTTAATAAGAACGTTTTGAGTCAGGCTTAACCCAAGCAGGCGTTTTTTAGGATTACACTTTCTGATTAATTTTATACAAATAAAACATCTATGTTTTTTTATACGTAtaaaaa  >  2:928269/1‑140 (MQ=255)
                                                                                                                                        tctttcttTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt               <  1:1646180/125‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                        
TGCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAA  >  NZ_CP034943/633917‑634190

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑