Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943634,0640CG28.2% 386.7 / 36.3 188W569C (TGG→TGC) EO946_RS03330ABC‑F family ATP‑binding cassette domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (29/93);  new base G (48/0);  total (94/94)
Fisher's exact test for biased strand distribution p-value = 2.23e-22
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 191 total aligned reads displayed.

TGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCC  >  NZ_CP034943/633925‑634202
                                                                                                                                           |                                                                                                                                          
  gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCa                                                                                                                                          >  1:3228414/1‑140 (MQ=255)
  gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCa                                                                                                                                          <  2:2617379/140‑1 (MQ=255)
  gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGTTTGTTTTTGCa                                                                                                                                          >  1:1024115/1‑140 (MQ=255)
   cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                                         <  1:2421053/140‑1 (MQ=255)
   cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                                         <  2:3229948/140‑1 (MQ=255)
    ttGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGCGTTCTTTTTcgaga                                                                                                                                        >  2:1136354/1‑136 (MQ=255)
    ttGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGGTTCTTTTTACAtt                                                                                                                                        >  2:1805962/1‑140 (MQ=255)
    ttGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTATTTTTCAAtt                                                                                                                                        >  2:3007221/1‑140 (MQ=255)
      gTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCt                                                                                                                                      <  2:2392870/140‑1 (MQ=255)
       tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTGCTTTCTTTTTCCattatt                                                                                                                                     >  2:284504/1‑140 (MQ=255)
          cTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCttttt                                                                                                                                  <  1:1907342/140‑1 (MQ=255)
            tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTACTGTTTTCTTCAATGGGTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGTCGTTCTGTCTTTTTGCATTAttgttat                                                                                                                                >  2:1297537/1‑138 (MQ=255)
            tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGGGTTGTTTGTTTTTGAAGTCTTTttct                                                                                                                                >  1:252333/1‑140 (MQ=255)
            tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTGTTTCTTTTTGCATTCTTTttct                                                                                                                                >  2:682366/1‑140 (MQ=255)
            tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTTCATTCtttttat                                                                                                                                >  1:3036985/1‑138 (MQ=255)
            tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGGTTGTTTTTACAATAtttttgt                                                                                                                                >  1:3108761/1‑138 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTCTGTTTCCCTTCTTTttctt                                                                                                                               >  2:3236295/1‑140 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTCTTTttgtt                                                                                                                               >  2:2912952/1‑140 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTGTTTGCATTATTTttgtt                                                                                                                               >  2:749033/1‑140 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGGTTGTTTTTGCATTGATTttctt                                                                                                                               >  2:466270/1‑140 (MQ=255)
                   gTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGGTTATTTTTGAAATCTTTTTGTTCTTCat                                                                                                                         >  1:1601811/1‑140 (MQ=255)
                    tCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGGTTGTTTTTCCAATATTTTTGTTCTTAata                                                                                                                        >  2:559403/1‑140 (MQ=255)
                    tCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTTTTTTTGCATTGTTTTTATTATTAata                                                                                                                        >  2:35406/1‑140 (MQ=255)
                            gATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtt                                                                                                                <  1:749033/140‑1 (MQ=255)
                              tttCCGGATCACATAGCAATTCATCGTTATGAGTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCTTTGTTTTTCCATTCTTTTTCTTCTTCATATGAACCtttt                                                                                                              >  2:143239/1‑140 (MQ=255)
                              tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTTTTTTTGGATTTTTTTTGTTTTTTATATTAACGtttt                                                                                                              >  1:1960516/1‑140 (MQ=255)
                              tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGGTTCTTTTTCCATTCTTTTTCTTGTTCATATGAACGtttt                                                                                                              >  2:142671/1‑140 (MQ=255)
                              tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTGTTCTTGATATGAACTtttt                                                                                                              >  2:795471/1‑140 (MQ=255)
                                tCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGGTTTTGCATTATTTTTATTGTTGAAATTAAAGtttttt                                                                                                            >  1:287994/1‑138 (MQ=255)
                                  cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                          <  1:267469/140‑1 (MQ=255)
                                  cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                          <  2:1134643/140‑1 (MQ=255)
                                  cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                          <  1:1388348/140‑1 (MQ=255)
                                      tCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAgg                                                                                                      <  2:2402631/140‑1 (MQ=255)
                                       cacaTAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGc                                                                                                     <  1:724767/140‑1 (MQ=255)
                                            aGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCGTTGTTTTTGCATTATTTTTCTTCTTAATATTTAAGTTTTGAGTAAGGCTTAAc                                                                                                >  2:1501870/1‑140 (MQ=255)
                                                 ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTTTGTTTGGCTTCTTTTTGTTGGTGCTATTAACGGTTTTGGTCAGGCTTAAACGAAg                                                                                           >  1:2829986/1‑140 (MQ=255)
                                                 ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGCATTGTTTTTGTTCTTCATATGAACGTTTTGATTGAGGCTTaaaagaat                                                                                           >  2:2779518/1‑134 (MQ=255)
                                                   cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTAGATTCTTTTTGTTATTCATATGAACGGTTTGAGTCAGGCTTTACCGAAGcc                                                                                         >  2:1956772/1‑139 (MQ=255)
                                                      cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTCCATTCTTTTTGTTATTCATATGAACGTTTTGAGTCAGGCTTAAACGAAGCAGGc                                                                                      >  2:1582254/1‑140 (MQ=255)
                                                      cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTGCATTATTTTTATTCTTAATATGTACGTTTTTGGTGAAGGTTAAACGAACAAGGc                                                                                      >  2:1522451/1‑140 (MQ=255)
                                                      cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGGTTGCGGTGTTTGTTTTTGGAATGTTTTTGTTGTTCATATGAAGGTTTTTTGTGAGGCTTAAACGAAGCAggg                                                                                      >  1:1690105/1‑139 (MQ=255)
                                                        ttATGACTAATTTTTTCTTCAAGGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGGTTTTGTTTTTACCATATTTTTATTATTGATATTTACTGTTTGAGTCAGGCTTAAACGAAGCAGGCgg                                                                                    >  1:816299/1‑139 (MQ=255)
                                                           tGACTGATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGGGTTTGTTTTTGCCATATTTTTGTTGTTGATATTAAAGTTTTGTGTGAGGGTTTAACCAAACAGGGGgttt                                                                                 >  1:1428841/1‑140 (MQ=255)
                                                                aaTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGGTTTGTTTTGCATTGTTTTTGTTCTTGAGATGAACGTTTTTAGTCAGGGTTAAACGAACCCGGCGTTTTTTAgg                                                                            >  2:2689429/1‑140 (MQ=255)
                                                                aaTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCTTTCTTTTTACATTATTTTTATTCTTCATATTAAACTTTTTATTGAGGCTTAAACCAAGCAGGCGGTTTTTTgg                                                                            >  2:2947884/1‑140 (MQ=255)
                                                                 aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                                           <  1:35406/140‑1 (MQ=255)
                                                                 aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa                                                                           <  1:2375852/140‑1 (MQ=255)
                                                                  tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCCTTGTTTTTTTTCTTGATATGTATGTTTTTTTTGAGGCGTAACCGGAGCAGGGGTTTTTTgggtt                                                                          >  1:113575/1‑138 (MQ=255)
                                                                  tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAt                                                                          <  2:2720745/140‑1 (MQ=255)
                                                                  tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAt                                                                          <  2:1453828/140‑1 (MQ=255)
                                                                  tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTATTTTTGCATTGTTTTTATTCTTCATATGAAAGTTTTTATTAAGGCTTAACCGAAGCAGGGGTTTTTTAGGAt                                                                          >  2:2175615/1‑140 (MQ=255)
                                                                  tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGGTGGCGGTGTTTCTTTTTCCAATCTTTTTATTCTTAATATGAACGTTTTGATTCAGGCTTAACAGAAGCAGGCGTTTTTTCGGAt                                                                          >  2:2332331/1‑140 (MQ=255)
                                                                      ttcttcAATGGTTTGAACAGTGTCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGCCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCct                                                                      <  1:2084259/140‑1 (MQ=255)
                                                                      ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTACATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCATAAACCAAGCAGGCGTTTTTTCGGATTCct                                                                      >  2:1709836/1‑140 (MQ=255)
                                                                      ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTCCATTATTTTTGTTATTAATAATAAAGTTTTTAAGAATGCTTTAACGAATCAGGCGTTTTTTGGGAttgat                                                                      >  2:2084259/1‑137 (MQ=255)
                                                                               ggTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGAt                                                             <  2:3135913/140‑1 (MQ=255)
                                                                               ggTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGAt                                                             <  1:1501870/140‑1 (MQ=255)
                                                                                    gAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTGTCTTTTTCCATTCTTTTTCTTCTTGATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCAtt                                                        <  1:1788351/140‑1 (MQ=255)
                                                                                     aaCAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTCCAGTCTTTTTCTTCTTCATATGAACGGTTTTTGTGAGGGTTTAACGAACCCGGCGTTTTTTTGGGTTGCTCTTGGTGCttgtgtt                                                       >  1:1896694/1‑135 (MQ=255)
                                                                                        aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct                                                    <  1:3064492/140‑1 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTATTTTTCCATTCTTTTTGTTCTTCATATGAACGGTTTGAGTCAGGGGTAAACGAAGAAGGCGTTTTTTGGGATTCCGCGTGGTGATTAATTTtctgc                                                  >  2:1057374/1‑138 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTATTTTTCCATTCTTTTTCTTCTTCATATTAACGTTTTGATTCAGGCTTAACCGAAGAAGGCGTTTTTTAGGTTTCCAGTTTGTGATTAAttttgaac                                                  >  2:584343/1‑136 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTTTTTTTGCATTATTTTTATTGTTGATATTAACGTTTTTTGTGAGGCTTTAACCAAGCAGGCGTTTTTTAGGATTGCTCTTTATGATTGATTTtctac                                                  >  2:1116767/1‑138 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGGGGTTGTTTTTTCATTGTTTTTGTTGTTAATATGAAAGTTTTGTTGAAGGCTTAAACCAAGCAGGCGTTTTTTGGTGTTCCTCTTTGTGGTTGAttttttgc                                                  >  1:2591704/1‑136 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTCTTTTTAGTCTTGATATTAACGTTTTTAGTGAGGCTTAACCGAAAGAGGCGTTTTTTAGGTTTGCTCTTGCTGATTAATTTTCTcc                                                  >  2:1457656/1‑140 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGGTTTTTGTGATTGCTCTTGCTGATTCATTTTGTcc                                                  >  2:1982559/1‑140 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTACATTGTTTTTCTTCTTAATATGAACGTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTGGGATTGCTCTTGGTGATTCATTTTGTcc                                                  >  2:2552082/1‑140 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTGTGCGGGGTTTATTTTTGCATTTTTTTTGTTGTTCATATTAACGTTTTTAGTCACGCTTAAACCAAACAGGCGTTTTTTAGGATTACTGTTTGTGATTAAttttatac                                                  >  2:205498/1‑136 (MQ=255)
                                                                                               tCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTGGTTTTACATTCTTTTTGTTGGTGAGATGTACGTGTTTAGTCAGGCTTAACCGAAGCCGGCGTTTTTTCGGGTTCCTCGTGGGGAGTCAGTTTGTGCaagta                                             >  2:1068735/1‑137 (MQ=255)
                                                                                                  aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                                          <  2:273571/140‑1 (MQ=255)
                                                                                                      cttcAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTGTTTTTGTTCTTAATATGAAAGTTTTGAGTGAGGCTTAAACGAAGCAGGCGTTTTTTCGGATTCCTCTTTCTGATTAATTTTCTCCAATTAAAtctgg                                      >  2:646626/1‑139 (MQ=255)
                                                                                                       ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                     <  1:441306/140‑1 (MQ=255)
                                                                                                       ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAGTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                     <  1:3241564/140‑1 (MQ=255)
                                                                                                                 cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                           <  1:563291/140‑1 (MQ=255)
                                                                                                                 cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTGCATCTGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                           <  1:68544/140‑1 (MQ=255)
                                                                                                                 cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCATTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                           <  2:2014253/140‑1 (MQ=255)
                                                                                                                   gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct                         <  1:600235/140‑1 (MQ=255)
                                                                                                                   gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct                         <  1:1563944/140‑1 (MQ=255)
                                                                                                                      tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg                      <  1:1057374/140‑1 (MQ=255)
                                                                                                                              gttgttTCTTTTTCCATTCTTTTTCTTCTTAATATGAACGTTTTGATTCAGGCTTTAACGAAGCAGGCGTTTTTTAGGATTACTCTTTCTGATTCATTTTATACAATTAAAGCTTCTCTGTTTTTTTATACGTAtaataa              >  2:985501/1‑140 (MQ=255)
                                                                                                                              gTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTAGGATTCCTCTTTCTGATTCATTTTCTCCAATTCAAGCTGCTCTTTTTTTTTATACGTAtaataa              >  2:2322511/1‑140 (MQ=255)
                                                                                                                              gTTCTTTCTTTTTCCATTCTTTTTCTTCTTAATAAGAACGTTTTGAGTCAGGCTTAACCCAAGCAGGCGTTTTTTAGGATTACACTTTCTGATTAATTTTATACAAATAAAACATCTATGTTTTTTTATACGTAtaaaaa              >  2:928269/1‑140 (MQ=255)
                                                                                                                                tctttcttTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                           >  2:1646180/1‑125 (MQ=255)
                                                                                                                                  tttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGt          <  2:1899271/140‑1 (MQ=255)
                                                                                                                                  tttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGt          <  2:2739869/140‑1 (MQ=255)
                                                                                                                                  tttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGt          <  1:966207/140‑1 (MQ=255)
                                                                                                                                  tttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGt          <  2:2829986/140‑1 (MQ=255)
                                                                                                                                  tttctttTTCCATTATTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGt          <  1:1467549/140‑1 (MQ=255)
                                                                                                                                   ttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa         <  1:646626/140‑1 (MQ=255)
                                                                                                                                   ttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa         <  1:2913201/140‑1 (MQ=255)
                                                                                                                                   ttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa         <  1:2779518/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATCTGACCGGTTTGAGCCAGGCTTAACCGAAGCAGGCGTTTTTGCGGATGCCTCGTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt       <  1:1758403/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt       <  1:659400/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt       <  2:3228414/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt       <  1:2748059/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt       <  1:2549183/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt       <  1:2186456/140‑1 (MQ=255)
                                                                                                                                     atttttAAATTCTTTTTCTTATTCATATGATCGTTTTGAGTCAGGATTAACCTAAGCATGCTTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGATTCTCTGTTTTTTTCTCCGTATAATAATCGTAAt       <  1:226002/139‑1 (MQ=255)
                                                                                                                                      cttgtCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAAGAATCGTAAtc      <  1:2136022/136‑1 (MQ=255)
                                                                                                                                          tCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTccc  <  1:113690/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                          
TGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCC  >  NZ_CP034943/633925‑634202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑